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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9585#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1158 fasta sequence
[GGATTTATGCCTCCGAACGGTTAAGG-CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC-AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT------CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG-ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC-GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG-ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT-AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAACACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGATGGGATTGATACCCTTTGGCCACACAATCACAGCGATCGCCGCCAGTAAAAATGGT-TATTTGCAAGACAAAATTAACTTTTTCAAAACCAATAAA]
[+] EMBL CNS08ZQL [GGATTTATGCCTCCGAACGGTTAAGGCCCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAATTA AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTT ]
[+] EMBL CNS08UA9 [ CCTCCGAACGGTTAAGG CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTTTGGCCGTGTCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCG ]
[+] EMBL CNS08VFE [ TCCGAACGGTTAAGG CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTTACATCAACAACAACAACAACCATT ATAACATCCAAATCAACACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGAGCTGATGGGAT ]
[+] EMBL CNS08F18 [ ACGGTTAAGG CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCAACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAG ]
[+] EMBL CNS08VGD [ GGTTAAGG CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGAC ]
[+] EMBL CNS08X31 [ aCAGACCAGATCCATCAAAAATGACCAAGAAGGCTGATCCCTATGGCTTCG CAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACCAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCGCGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGGACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACCTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTTTCCTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGCCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCCTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAACACACACT ]
[+] EMBL CNS08NTU [ TCCATCGAAAATGAACAAGAAGGCTGAT CCTATGGCTTCG CAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTG CGCCGGTGCCACGTCGCTACCCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTTTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGTTTTGGTGCTCGTATTCTACGACGAAGTTAAAGGCCCTGCTGGGTTAAGACGGGGAACA ]
[+] EMBL CNS08CYU [ CATCAAAAATGACCAAGAAGGCTGATCCCTATGGCTTCG CAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACCAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCGCGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCAAGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGGACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTTTCCTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAGAACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGCCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCCTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAACACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGAT ]
[-] EMBL CNS08VFF [ gttTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATTCCGCGGTGCCGCCGGTGCCACGTCGTTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCAACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGAAACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCCACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATT ATAACATCCAAATCAAAACACACTTACCGGTAGCGATCGG ]
[-] EMBL CNS08CYV [ TCCAAAGCAGATCGCCGTCGACCAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCGCGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATTCCGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGGACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGACGGGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGAAACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTTTCCTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGCCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCCTTTTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAAAACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGATGGGATTGATACCCTTTGGCCACACAATCACAGCGATCGCCGCCAGTAAAAATGGT TATTTGCAAGACAAAATTA ]
[-] EMBL CNS08X32 [ TCGCCGTCGACCAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCGCGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTTTGGCGCTACTTCCTGGGTAACCTCGGAATCC GCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGGACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACCTCGGTTGCTTCGAAACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTTTCCTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGCCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCCTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAACACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGATGGGATTGATACCCTTTGGCCACACAATCACAGCGATCGCCGCCAGTAAAAATGGTGTATTTGCAAGACAAAATTAACTTTTTCAAAACCAATAAA]
consensusID : consensus_9585#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 667 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGAAAAAATAGTGAAAATGATTGACGCCGAGATGGTTATTCCTGATAAGGACGAGTCCGACACGCGAACAATGAAGGACGTTGTGAACCCGCTGGAAGAACCGCTGGAGGAGGATCTTTACATCAAATACAAGAAGCTGCAAAAGATGCTCGAGTTCCTGGAGGTGCAGGAAGAGTACATCAAGGATGAGCAGCGCAACCTGAAGAAGGAGTACCTGCACGCGCAGGAAGAGGTGAAGCGCATCCAGTCGGTGCCGCTCGTAATTGGCCAGTTCCTGGAGGCGGTCGATCAGAACACCGGTATCGTCGGTTCGACCACCGGGTCCAACTACTACGTGCGCATTCTCTCCACCATTGACCGGGAGCTGCTGAAGCCGTCGGCCAGTGTCGCCCTGCACAAGCACAGCAATGCGCTGGTGGACGTTCTGCCACCGGAGGCGGACAGCTCCATCTCGATGCTGAATGCGGACGAAAAGCCGGACGTGCAGTACTCGGACATTGGTGGCATGGACATGCAGAAGCAGGAAATCCGCGAAGCCGTCGAACTGCCGCTGACACACTTCGAGCTGTACAAGCAGATCGGTATTGACCCACCGCGCGGTGTACTGATGTACGGGACCGCCCGGTTGCGGCAAGACAATGT]
[+] EMBL BM575734 [CCGCCCACGCGTCCGCCCACGCGTCCGAAAAAATAGTGAAAATGATTGACGCCGAGATGGTTATTCCTGATAAGGACGAGTCCGACACGCGAACAATGAAGGACGTTGTGAACCCGCTGGAAGAACCGCTGGAGGAGGATCTTTACATCAAATACAAGAAGCTGCAAAAGATGCTCGAGTTCCTGGAGGTGCAGGAAGAGTACATCAAGGATGAGCAGCGCAACCTGAAGAAGGAGTACCTGCACGCGCAGGAAGAGGTGAAGCGCATCCAGTCGGTGCCGCTCGTAATTGGCCAGTTCCTGGAGGCGGTCGATCAGAACACCGGTATCGTCGGTTCGACCACCGGGTCCAACTACTACGTGCGCATTCTCTCCACCATTGACCGGGAGCTGCTGAAGCCGTCGGCCAGTGTCGCCCTGCACAAGCACAGCAATGCGCTGGTGGACGTTCTGCCACCGGAGGCGGACAGCTCCATCTCGATGCTGAATGCGGACGAAAAGCCGGACGTGCAGTACTCGGACATTGGTGGCATGGACATGCAGAAGCAGGAAATCCGCGAAGCCGTCGAACTGCCGCTGACACACTTCGAGCTGTACAAGCAGATCGGTATTGACCCACCGCGCGGTGTACTGATGTACGGGACCGCCCGGTTGCGGCAAGACAATGT]
[+] EMBL BM612172 [CCGCCCACGCGTCCGCCCACGCGTCCGAAAAAATATTGAAAATGATTGACGCCGAGATGGTTATTCCTGATAAGGACGAGTCCGACACGCGAACAATGAAGGACGTTGTGAACCCGCTGGAAGAACCGCTGGAGGAGGATCTTTACATCAAATACAAGAAGCTGCAAAAGATGCTCGAGTTCCTGGAGGTGCAGGAAGAGTACATCAAGGATGAGCAGCGCAACCTGAAGAAGGAGTACCTGCACGCGCAGGAAGAGGTG ]
consensusID : consensus_9585#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 662 fasta sequence
[CGACCCACGCGTCCGCGGACGCGTGGGAGGTGACGCTGTTCTACGACCACGCGAACGGCACGCAGGTGAAGCAGAAGTGCAAGTTTGCACAGTTCAAAGATCCGGAAACGATTCCTGACCCGGTATTGGCCCATCTGGAAAATTTGGCCCCCCAGCTGCGCATGAAGCTCGGCGACCTGATCGACCTGATGGTGGATCTGGCCGAGTCCGTGCACGACGTCGAGTTCGTGCAGCAGGTGCTCGAGATTAACAACAACATCAACGAGCTGTCGGCAGATAATTAAGACAAAACATACAACAACCAAATATTGTGCATTTTTTCCCAACTTACTTACTTACAAACTATGATTCACACTAGCTCTAATATCTTACTAGCTTAATAGGAGAGCGCACCGACTCAAACTAATCGAACAATTTACTATTCACCAAGAAGTAACCACCAATCCGTGACACACCACCCTTTAATGGGCCCAATCGCTCATTAAGGGTTAAAGCACTTACTATTTTTGCTTGACCTTAGCATATCTACTTGACCACTTGTGTCTGACCGCGTGCGTAGTATTTGTTTTGATGTGTAATTCAAATTTTAAACTGTAACTTTTGTGTGTCGTACGAAAAACAAACAAAATTAATACGCGTGTTTTAAGCAACTTTTGTAACCC]
[+] EMBL BM579471 [CGACCCACGCGTCCGCGGACGCGTGGGAGGTGACGCTGTTCTACGACCACGCGAACGGCACGCAGGTGAAGCAGAAGTGCAAGTTTGCACAGTTCAAAGATCCGGAAACGATTCCTGACCCGGTATTGGCCCATCTGGAAAATTTGGCCCCCCAGCTGCGCATGAAGCTCGGCGACCTGATCGACCTGATGGTGGATCTGGCCGAGTCCGTGCACGACGTCGAGTTCGTGCAGCAGGTGCTCGAGATTAACAACAACATCAACGAGCTGTCGGCAGATAATTAAGACAAAACATACAACAACCAAATATTGTGCATTTTTTCCCAACTTACTTACTTACAAACTATGATTCACACTAGCTCTAATATCTTACTAGCTTAATAGGAGAGCGCACCGACTCAAACTAATCGAACAATTTACTATTCACCAAGAAGTAACCACCAATCCGTGACACACCACCCTTTAATGGGCCCAATCGCTCATTAAGGGTTAAAGCACTTACTATTTTTGCTTGACCTTAGCATATCTACTTGACCACTTGTGTCTGACCGCGTGCGTAGTATTTGTTTTGATGTGTAATTCAAATTTTAAACTGTAACTTTTGTGTGTCGTACGAAAAACAAACAAAATTAATACGCGTGTTTTAAGCAACTTTTGTAACCC]
consensusID : consensus_9585#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 362 fasta sequence
[AATCTACCCTTTTTGTTTTACAGTTGTAGTTAACAGTTTAAACATTTAAAACACATTTATACGCAATATTGCTCTCTCTCTCTCTCTCTCTCTCTC---C-CTCTCTCTCTCTCTCTCTCTCTCTTGTATCTACTTCACGATCCCAATACGTTTCCCTAACCAAACCCAAAGCTACTTACCCCGATCGATACCCACAAATTCCCTACTCTTTATCAAAAATATATCTTCCATCTGAGATTTTTGGTTCCCGCACAACCTGCGCCTGTGTCACCGTTTTGTATAATCTTCCTTTTTTAGCTCTCTAATGCGCCCACGCTTTGTTTTGTTTTTTTTTTTTGTTGTAGGTCAATAATACGGACGAAAAT]
[+] EMBL CNS08UUA [AATCTACCCTTTTTGTTTTACAGTTGTAGTTAACAGTTTAAACATTTAAAACACATTTATACGCAATATTGCTCTCTCTCTCTCTCTCTCTCTCTC C CTCTCTCTCTCTCTCTCTCTCTCTTGTATCTACTTCACGATCCCAATACGTTTCCCTAACCAAACCCAAAGCTACTTACCCCGATCGATACCCACAAATTCCCTACTCTTTATCAAAAATATATCTTCCATCTGAGATTTTTGGTTCCCGCACAACCTGCGCCTGTGTCACCGTTTTGTATAATCTTCCTTTTTTAGCTCTCTAATGCGCCCACGCTTTGTTTTGTTTTTTTTTTTTGTTGTAGGTCAATAATACGGACGAAAAT]
[+] EMBL AGA283045 [ TACCCWTTTTGTTTTACAGTTGTAGTTAACAGTTTAAACATTTAAAACACATTTATACGCAATATTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTATCTACTTCACGATCCCAATACGTTTCCCTAACCAAACCCAAAGCTACTTACCCCGATCGATACCCACAAATTCCCTACTCTTTATCAAAAATATATCTTCCATCTGAGACTTTTGGT ]
consensusID : consensus_9585#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 283 fasta sequence
[TGCAAACCAACCGAATGTCGCCCCGCGGTCACGGCCAACGTGCAGAAGGGCAAGAACACCAAGATGCGCAAGGCCAACCGCGGGCAACTGGAGAACAACCAGAACCCGGAGAAGCCGCCCAACCACAACAAGGGCAACGTGGGCCTCGTGTGCACCAAGGGCGAACCGGCCGAGAACCGCGACAAGCAGACCGAGAGCAAGGTGCGAGCCCCGGCCCGTGCCGGTGCGAACGCCCCGCACGAGGTCGTCAACCCGGCCCAGAACACCGGTCACGGCCCGGAGA]
[+] EMBL CNS08DT6 [TGCAAACCAACCGAATGTCGCCCCGCGGTCACGGCCAACGTGCAGAAGGGCAAGAACACCAAGATGCGCAAGGCCAACCGCGGGCAACTGGAGAACAACCAGAACCCGGAGAAGCCGCCCAACCACAACAAGGGCAACGTGGGCCTCGTGTGCACCAAGGGCGAACCGGCCGAGAACCGCGACAAGCAGACCGAGAGCAAGGTGCGAGCCCCGGCCCGTGCCGGTGCGAACGCCCCGCACGAGGTCGTCAACCCGGCCCAGAACACCGGTCACGGCCCGGAGA]
consensusID : consensus_9585#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence
[CTTCGGAAACGGTCAACAGGGNTGGAAACTTCCCGTTCTTCGGTTAAAGTGCTCGTCTAAGCTAAATATTATTTAAAATTGAAGATGGAACATCGATAGAGAAACCAAATTTNGTNGGAAAAAAAAAANGCTGGAANATTATNCANGCTTTTAACNATNCNGATATTATNCANGNGCNGNACTAAAATATNAATATGTGTNATGTGTGTGTGTTTGGGGGATATGNGAACGCNAAAAAAAAAA]
[+] EMBL CF541920 [CTTCGGAAACGGTCAACAGGGNTGGAAACTTCCCGTTCTTCGGTTAAAGTGCTCGTCTAAGCTAAATATTATTTAAAATTGAAGATGGAACATCGATAGAGAAACCAAATTTNGTNGGAAAAAAAAAANGCTGGAANATTATNCANGCTTTTAACNATNCNGATATTATNCANGNGCNGNACTAAAATATNAATATGTGTNATGTGTGTGTGTTTGGGGGATATGNGAACGCNAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9585#2 ------------------------------------------------------------
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 ------------------------------------------------------------
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 GGATTTATGCCTCCGAACGGTTAAGGCCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACA 60
consensus_9585#2 ----------CGACCCACGCGTCCGCGGACGCGTGGGAGGTGACGCTGTTCTACGACCAC 50
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ---------------------------------------------------------AAT 3
consensus_9585#1 -------------------------------------------------CCGCCCACGCG 11
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 GTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGC 120
consensus_9585#2 GCGAACGGCACGCAGGTGAAGCAGAAGTGCAAGTTTGCACAGTTCAAAGATCCGGAAACG 110
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 CTACCCTTTTTGTTTTACAGTTGTAGTTAACAGTTTAAACATTTAAAACACATTTATACG 63
consensus_9585#1 TCCGCCCACGCGTCCGAAAAAATAGTGAAAATGATTGACGCCGAGATGGTTATTCCTGAT 71
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 TTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCA 180
consensus_9585#2 ATTCCTGACCCGGTATTGGCCCATCTGGAAAATTTGGCCCCCCAGCTGCGCATGAAGCTC 170
consensus_9585#5 --------------------------------------------------------CTTC 4
consensus_9585#3 CAATATTGCTCTCTCTCTCTCTCTCTCTC---TCTCCCTCTCTCTCTCTCTCTCTCTCTC 120
consensus_9585#1 AAGGACGAGTCCGACACGCGAACAATGAAGGACGTTGTGAACCCGCTGGAAGAACCGCTG 131
consensus_9585#4 ---------------------------TGCAAACCAACCGAATGTCGCCCCGCGGTCACG 33
consensus_9585#0 CCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCCAAGCAGATCGCCGTC 240
consensus_9585#2 GGCGACCTGATCGACC--TGATGGTGGA----TCTGGCCGAGTCCGTGCACGACG----- 219
consensus_9585#5 GGAAAC--GGTCAACA--GGGNTGGAAA----CTTCCCGTTCTTCGGTTAAAGTG----- 51
consensus_9585#3 TTGTATCTACTTCAC---GATCCCAATA----CGTTTCCCTAACCAAACCCAAAG----- 168
consensus_9585#1 GAGGAGGATCTTTACATCAAATACAAGA----AGCTGCAAAAGATGCTCGAGTTC----- 182
consensus_9585#4 GCCAACGTGCAGAAGGGCAAGAACACCA----AGATGCGCAAGGCCAACCGCGGG----- 84
consensus_9585#0 GACAAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCAAGGATGTGTACAAACAGGTGTT 300
* *
consensus_9585#2 -TCGAGTTCGTGCAGCAGGTGC-TCG-AGATTAACAAC--AACATCAACGAGCT-GTCGG 273
consensus_9585#5 -CTCGTCTAAGCTAAATATTAT-TTA-AAATTGAAGATGGAACATCGATAGA---GAAAC 105
consensus_9585#3 -CT-ACTTACCCCGATCGATAC-CCACAAATTCCCTACTCTTTATCAA---------AAA 216
consensus_9585#1 -CTGGAGGTGCAGGAAGAGTACATCAAGGATGAGCAGCGCAACCTGAAGAAGGA-GTACC 240
consensus_9585#4 -CAACTGGAGAACAACCAGAAC-CCGGAGA--AGCCGCCCAACCACAACAAG---GGCAA 137
consensus_9585#0 CCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGGATC 360
consensus_9585#2 CAGATAATTAAGACAAAACATACAACAACCAAATATTGT-GCAT-TTT-TTCCCAACTTA 330
consensus_9585#5 CAAAT--TTNGTNGGAAAAAAAAAANGCTGGAANATTAT-NCANGCTT-TTAACNATNCN 161
consensus_9585#3 TATATCTTCCATCTGAGATTTTTGGTTCCCGCACAACCT-GCGCCTGT-GTCACCGTTTT 274
consensus_9585#1 TGCACGCGCAGGAAGAGGTGAAGCGCATCCAGTCGGTGCCGCTCGTAA-TTGGCCAGTTC 299
consensus_9585#4 CGTGGGCCTCGTGTGCACCAAGGGCGAACCGGCCGAGAA---CCGCGA-CAAGCAGACCG 193
consensus_9585#0 CGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTAC 420
*
consensus_9585#2 CTT--ACT-TACAAACTATG--ATTCACACTA-GCTCTA-ATATCTTACTA---GCTTAA 380
consensus_9585#5 GAT--ATTATNCANGNGCNG--NACTAAAATA-TNAATATGTGTNATGTGT---GTGTGT 213
consensus_9585#3 GTATAATCTTCCTTTTTTAG--CTCTCTAATG-CGCCCACGCTTTGTTTTG---TTTTTT 328
consensus_9585#1 CTGGAGGCGGTCGATCAGAA--CACCGGTAT--CGTCGGTTCGACCACCGG---GTCCAA 352
consensus_9585#4 AGAGCAAGGTGCGAGCCCCG--GCCCGTGCCGGTGCGAACGCCCCGCACGA---GGTCGT 248
consensus_9585#0 CCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGA 480
*
consensus_9585#2 TAGGAGAGCGCACCGACTCAAACTAATCGAACAATTTACTATTCACCAAGAAGTAACCAC 440
consensus_9585#5 TTGGGGGATATGNGAACGCNAAAAAAAAAA------------------------------ 243
consensus_9585#3 TTTTTTGTTGTAGGTCAATAATACGGACGAAAAT-------------------------- 362
consensus_9585#1 CTACTACGTGCGCATTCTCTCCACCATTGACCGGGAGCTGCTGAAGCCGTCGGCCAGTGT 412
consensus_9585#4 CAACCCGGCCCAGAACACCGGTCACGGCCCGGAGA------------------------- 283
consensus_9585#0 CTGTCTGAAGAAGACGGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGT 540
consensus_9585#2 CAATCCGTGACACACCACCCTTTAATGGGCCCAATCGCTCATTAAGGGTTAAAGCACTTA 500
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 CGCCCTGCACAAGCACAGCAATGCGCTGGTGGACGTTCTGCCACCGGAGGCGGACAGCTC 472
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 GTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAA 600
consensus_9585#2 CTATTTTTGCTTGACCTTAGCATATCTACTTGACCACTTGTGTCTGACCGCGTGCGTAGT 560
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 CATCTCGATGCTGAATGCGGACGAAAAGCCGGACGTGCAGTACTCGGACATTGGTGGCAT 532
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 GGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGT 660
consensus_9585#2 ATTTGTT-TTGATGTGTAATTCAAATTTTAAACTGTAACTTTTGTGTGTCGTACGAAAAA 619
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 GGACATG-CAGAAGCAGGAAATCCGCGAAGCCGTCGAACTGCCGCTGACACACTTCGAGC 591
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 GGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAGACGACGCATGAT 720
consensus_9585#2 CAAACAAAATTAATACGCGTGTTTTAAGCAACTTTTGTAACCC----------------- 662
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 TGTACAAGCAGATCGGTATTGACCCACCGCGCGGTGTACTGATGTACGGGACCGCCCGGT 651
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 GATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGT 780
consensus_9585#2 ------------------------------------------------------------
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 TGCGGCAAGACAATGT-------------------------------------------- 667
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 CAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCT 840
consensus_9585#2 ------------------------------------------------------------
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 ------------------------------------------------------------
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 GCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTTAAGGCCCTGCTGGG 900
consensus_9585#2 ------------------------------------------------------------
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 ------------------------------------------------------------
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 TTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAG 960
consensus_9585#2 ------------------------------------------------------------
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 ------------------------------------------------------------
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 CAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAA 1020
consensus_9585#2 ------------------------------------------------------------
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 ------------------------------------------------------------
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 CACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGATGGGATTGATACCCTTT 1080
consensus_9585#2 ------------------------------------------------------------
consensus_9585#5 ------------------------------------------------------------
consensus_9585#3 ------------------------------------------------------------
consensus_9585#1 ------------------------------------------------------------
consensus_9585#4 ------------------------------------------------------------
consensus_9585#0 GGCCACACAATCACAGCGATCGCCGCCAGTAAAAATGGTTATTTGCAAGACAAAATTAAC 1140
consensus_9585#2 ------------------
consensus_9585#5 ------------------
consensus_9585#3 ------------------
consensus_9585#1 ------------------
consensus_9585#4 ------------------
consensus_9585#0 TTTTTCAAAACCAATAAA 1158
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||