These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9594#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1074 fasta sequence [TAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACGCTTCATTGATGTGAGATTGTCATAGCAATCCAGACATACTCGCAG-GGTTTATTGCTCTGNCCTGGTAGAATAAATTTTTTCGACGANCAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTC-ACTATCC-GGAA-CCCA-TA-CA-GCAGC-ATGTG---TTTCAA--C-TGG-TTTC-TTGCC--GCT-CTTG-CG-CAAT-AAAT--CTTC-TAT-GCA-CTT-GTT-GATGTGTGCC--ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC-AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC-GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTTGCTGACCGGCCGATTCTTGCCT] [+] EMBL CNS08CUN [TAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACGCTTCATTGATGTGAGATTGTCATAGCAATCCAGACATACTCGCAG GGTTTATTGCTCTGGCCTGGTAGAATAAATTTTTTCGACGAACAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTATTTTTACAATGCATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA CATGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCAAAAAGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTTAGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGGGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAAT ] [+] EMBL CNS08IGS [ ACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTTACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACGCTTCATTGATGTGAGA ] [-] EMBL BX626857 [ tTCCTGAATCATTTTC CCTGAGNTTTCAGTAGAG TAGCTGG TTG TG TG TNCCGGCAAGTGCTTNG TTCCGTCACGCTTCATTGATGNGAGATTGTCATAGCAATCCAGACATACTCGCAG AGGTTATTGCTCTGNCCTGGTAGAATAAA TTTTTCGACGANCAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTATTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCA ] [-] EMBL BX626797 [ TCATAGCAATCCAGACATACTCGCAGAGGTTTATTGCTCTGNCCTGGTAGAATAAATTTTTTCGACGANCAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCG CTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATC ] [-] EMBL CNS08IGR [ TTTTACAATGCATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACTACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATT GC TCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTG TTTGATAATTGATCAGTCGCTGC ] [-] EMBL BM645517 [ ATGCAGATGGTAGCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTcgg ] [-] EMBL BM619683 [ GCTTC ACTATCC GGAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTTGCTGACCGG ] [-] EMBL BX468314 [ cCTTCAACTATCCGGGAACCCCATTACCAGGCAGCAATGTGGTNTTTCAAACCTTGGTTTTCTTTGCCCGGTTCCTTGCCGCCAATGAGATTGCTTCTTATGGCACCTTGGTTGGATGTGTGCCCAATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTGCCCTACGTGCCGATTCTTGCCT] [-] EMBL CNS08CUM [ GAA CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT TTT TATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCTAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATT GCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCTGTTGCTGAttg ] [-] EMBL BX620922 [ A CCCA TA CA GCAGC ATGTG TTTCAA C TGG TTTC TTGCC GCT CTTG CG CAAT AAAT CTTC TAT GCA CTT GTT GATGTGTGCC ATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGC AAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATATTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCC GGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTT ] consensusID : consensus_9594#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 662 fasta sequence [ATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCACTTGTTGATGTGTGCCA-T-CCATTCC--TGCTTCT-CTGT-TTGTGTCGCAGCATA-CA-CAGC-AAACGACTTA-GT-CGC-TGTA-CGTA-TCAGCCA-T-CCATTC-CGGTA-CTGACCA-TTA-TCTTCCAGTGCTTGCAGTTGGACTT-CTT-CGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATA-TTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAA-AACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGGGCGG] [-] EMBL BM590873 [ATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCACTTGTTGATGTGTGCCA T CCATTCC TGCTTCT CTGT TTGTGTCGCAGCATA CA CAGC AAACGACTTA GT CGC TGTA CGTA TCAGCCA T CCATTC CGGTA CTGACCA TTA TCTTCCAGTGCTTGCAGTTGGACTT CTT CGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATA TTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAA AACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGGGCGG] [-] EMBL AL695379 [ GTGTGCCAGTGCCAGTNCGGGGNTTGTNNTGTGTTGTGTCGCAGCATAGCAGCAGCGNAGCGANTTAGGTGCGCGTGTAGCGTAGTCAGCCAGTGCCATTCGCGGTAGCTGACCAGTTAGTCTTCCAGTGCTTGCAGTTGGACTTGCTTGCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATAGTTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAA TGCCGAGACAATCCACTATATAATAAAATGAACAACCtc ] [-] EMBL BM651766 [ TCGCAGCATA CA CAGC AAACGACTTA GT CGC TGTA CGTA TCAGCCA T CCATTC CGGTA CTGACCA TTA TCTTCCAGTGCTTGCAGTTGGACTT CTT CGAGCGGTATTAAGTGTTGTTTGTTGTACTTCTTCTTGCCAATAACAATA TTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCCAACTATATTTCAAAATTGCTGAGACAATCCACTATATAATAAAATGAA AACCCGCACAGTATGCAGAATGATTAAATAAATATCCTTTTCGCTCTTcgg ] [-] EMBL CNS09N40 [ AACAATA TTGCCATACACCAAAATATCATTAAATAGGAAAAATTGACGAGCTTTTGGTCGTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATT GCTTCG CTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAA AACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTC ] consensusID : consensus_9594#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence [GACGAACAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCACTTGTTGATGTGTGCCATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGGGCGG] [-] EMBL BM617247 [GACGAACAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCACTTGTTGATGTGTGCCATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGGTACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGTTTGTTGTACTTCAGGACCCGCCCGGGAAGAAACAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGGGCGG] consensusID : consensus_9594#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 547 fasta sequence [TCCCTGTTACGTATCAGCCATCCNATTCCGGTACCTGACCATTATCTTCCAGTGCTTGCACGCTTGGACTTCTTCGACGCGGTACTTNANCTNTNNGCTNNTCGCTTGTACTTCTTCTTGCCAATNCACAACTCATTGCCATACACCGAGNGATATCATTAAATAGGNNCCNATTGACGAGCTTTTGGNTCGTTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCCACTCGTGNCGCGATTCTTGGC] [-] EMBL BX468199 [TCCCTGTTACGTATCAGCCATCCNATTCCGGTACCTGACCATTATCTTCCAGTGCTTGCACGCTTGGACTTCTTCGACGCGGTACTTNANCTNTNNGCTNNTCGCTTGTACTTCTTCTTGCCAATNCACAACTCATTGCCATACACCGAGNGATATCATTAAATAGGNNCCNATTGACGAGCTTTTGGNTCGTTTTACGACACATCTTTGTAAGAACACCTTCACCTACCAGGACCCGCCCGGGAAGAAACAAATGGTTGGCCAGATGTTCCGAAACAGTTTTCCACCATCTGTATTCGGCGAGCATTGGCCTTCGCTGTTAACTAATTTGTCAACCATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTATATTTCAAAATTGCCGAGACAATCCACTATATAATAAAATGAAAACCCGCACAGTATGCAGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTGATAATTGATCAGTCGCTGCCACTCGTGNCGCGATTCTTGGC] consensusID : consensus_9594#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 267 fasta sequence [ACCAAACATACATTCTCCCGAGATAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACCGGACGCGTGGGCGGACGCGTGGGCGG] [-] EMBL BM617616 [ACCAAACATACATTCTCCCGAGATAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTAAGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACCGGACGCGTGGGCGGACGCGTGGGCGG] [+] EMBL CNS09N41 [ AGATAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTCTATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCCCGTCGGGGGTCACGTTATCCTTAAGAGTTTCGTCATCA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9594#1 ------------------------------------------------------------ consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ------------------------------------------------------------ consensus_9594#0 TAATTACTTTATTATAACAACTGCTGGTATTATCTATGAACATTAAAGCACTCACAGTTC 60 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 ------------------------------------------------------------ consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ------------------------------------------------------------ consensus_9594#0 TATTTTTCAAGTTTACCATCAGCGTAAAATTTGGGCTCGTCGTGGGTCACGTTATCCTTA 120 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 ------------------------------------------------------------ consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ------------------------------------------------------------ consensus_9594#0 AGAGTTTCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCAGTAGAGTTAGCTGGT 180 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 ------------------------------------------------------------ consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ------------------------------------------------------------ consensus_9594#0 TTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACGCTTCATTGATGTGAGATTGTCA 240 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 ------------------------------------------------------------ consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ------------------------------------------------------------ consensus_9594#0 TAGCAATCCAGACATACTCGCAGGGTTTATTGCTCTGNCCTGGTAGAATAAATTTTTTCG 300 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 ------------------------------------------------------------ consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ------------------------------------------------------------ consensus_9594#0 ACGANCAAGGACCACAGACTACTGCTCCACAATTTCGACAATGATGCCGTCTGTTAATCA 360 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 ----------------------ATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATA 38 consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ------------------------------------------------------------ consensus_9594#0 TAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGTAGCTTCACTATCCGGAACCCATA 420 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 CAGCAGCATGTGTTTTCAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCAC 98 consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ----------------------GACGAACAAGGACCACAGACTACTGCTCCACAATTTCG 38 consensus_9594#0 CAGCAGCATGTGTTT-CAACTGGTTTCTTGCCGCTCTTGCGCAATAAATCTTCTATGCAC 479 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 TTGTTGATGTGTGCCATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAAC 158 consensus_9594#3 ------------------------------------------------------------ consensus_9594#2 ACAATGATGCCGTCTGTTAATCATAGTAAAATGAGTCTTTTTACAATGCATGCAGATGGT 98 consensus_9594#0 TTGTTGATGTGTGCCATCCATTCCTGCTTCTCTGTTTGTGTCGCAGCATACACAGCAAAC 539 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 GACTT-AGTCGCTGT-ACGTAT-CAGC--CATCCA-TTC---CGGTAC-TGACCATTATC 208 consensus_9594#3 --------TCCCTGTTACGTAT-CAGC--CATCCNATTC---CGGTACCTGACCATTATC 46 consensus_9594#2 AGCTTCACTATCCGGAACCCATACAGCAGCATGTGTTTCAACTGGTTTCTTGCCGCTCTT 158 consensus_9594#0 GACTT-AGTCGCTGT-ACGTAT-CAGC--CATCCATTCC----GGTAC-TGACCATTATC 589 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 TTCCAGTGCTTGCAG--TTGGACTTCTTCGA-GCGGTA--TTAAGTGTTGTTTGTT---- 259 consensus_9594#3 TTCCAGTGCTTGCACGCTTGGACTTCTTCGACGCGGTACTTNANCTNTNNGCTNNTCGCT 106 consensus_9594#2 GCGCAATAAATCTTC-TATGCACTTGTT-GATGTGTGCCATCCATTCCTGCTTCTCTGTT 216 consensus_9594#0 TTCCAGTGCTTGCAG--TTGGACTTCTTCGA-GCGGTA--TTAAGTGTTGTTTGTT---- 640 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 -GTACTTCTTCTTGC-CAATA-ACAA--TA-TTGCCATACACCAAAA--TATCATT---A 308 consensus_9594#3 TGTACTTCTTCTTGC-CAATNCACAACTCA-TTGCCATACACCGAGNGATATCATT---A 161 consensus_9594#2 TGTGTCGCAGCATACACAGCAAACGACTTAGTCGCTGTACGTATCAGCCATCCATTCCGG 276 consensus_9594#0 -GTACTTCTTCTTGC-CAATA-ACAA--TA-TTGCCATACACCAAAA--TATCATT---A 689 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 AATAGGAAA-AATTGACGAGCTTTTG-GTCG--TTTACGACACATCTTTGTAAGAACACC 364 consensus_9594#3 AATAGGNNCCNATTGACGAGCTTTTG-GNTCGTTTTACGACACATCTTTGTAAGAACACC 220 consensus_9594#2 TACTGACCATTATCTTCCAGTGCTTGCAGTTGGACTTCTTCGAGCGGTATTAAGTGTTGT 336 consensus_9594#0 AATAGGAAA-AATTGACGAGCTTTTG--GTCG-TTTACGACACATCTTTGTAAGAACACC 745 consensus_9594#4 ------------------------------------------------------------ consensus_9594#1 TTCACCTAC--CAGGACCCGCCCGGGAAGAAACAA-TGGTTGGCCAGATGTTCCGAAACA 421 consensus_9594#3 TTCACCTAC--CAGGACCCGCCCGGGAAGAAACAAATGGTTGGCCAGATGTTCCGAAACA 278 consensus_9594#2 TTGTTGTACTTCAGGACCCGCCCGGGAAGAAACAA-TGGTTGGCCAGATGTTCCGAAACA 395 consensus_9594#0 TTCACCTAC--CAGGACCCGCCCGGGAAGAAACAA-TGGTTGGCCAGATGTTCCGAAACA 802 consensus_9594#4 ----------------------------------ACCAAACATACAT-TCTCCCGAGATA 25 * ** * * **** * * consensus_9594#1 GTT-TTCCACCATCTGTATTCGGCGAGCATTGGC-TTCGCTGTTAACTAATTTGTCAACC 479 consensus_9594#3 GTT-TTCCACCATCTGTATTCGGCGAGCATTGGCCTTCGCTGTTAACTAATTTGTCAACC 337 consensus_9594#2 GTT-TTCCACCATCTGTATTCGGCGAGCATTGGC-TTCGCTGTTAACTAATTTGTCAACC 453 consensus_9594#0 GTT-TTCCACCATCTGTATTCGGCGAGCATTGGC-TTCGCTGTTAACTAATTTGTCAACC 860 consensus_9594#4 ATTACTTTATTATAACAACT--GCTGGTATTATCTATGAACATTAAAGCACTCA-CAGTT 82 ** * * ** * * ** * *** * * **** * * ** consensus_9594#1 ATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTA 539 consensus_9594#3 ATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTA 397 consensus_9594#2 ATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTA 513 consensus_9594#0 ATATTTGAGCAGCACTAATTTCAATGTATTTAAAACTATGCAAAACACACACCCTAACTA 920 consensus_9594#4 CTATTTTT-CAAGTTTACCATCAGCGTA---AAATTTGGGCTCGTCGTGGGTCACG-TTA 137 ***** ** ** *** *** *** * ** * * ** consensus_9594#1 TATTTCAAAATTGCCGAGACAATCCACTATATAATAAA-ATGAAAACCCGCACAGTATGC 598 consensus_9594#3 TATTTCAAAATTGCCGAGACAATCCACTATATAATAAA-ATGAAAACCCGCACAGTATGC 456 consensus_9594#2 TATTTCAAAATTGCCGAGACAATCCACTATATAATAAA-ATGAAAACCCGCACAGTATGC 572 consensus_9594#0 TATTTCAAAATTGCCGAGACAATCCACTATATAATAAA-ATGAAAACCCGCACAGTATGC 979 consensus_9594#4 TCCTTAAGAGTT-TCGTCATCATCTCCTGAATCATCTTCACCGGAGCTTTCA----GTAG 192 * ** * * ** ** * *** ** ** ** * * * ** * consensus_9594#1 AGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGG 658 consensus_9594#3 AGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTT--GATAATTGA 514 consensus_9594#2 AGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTTCGGACGCGTGG 632 consensus_9594#0 AGTATGATTTAATAAATATCCTTTTCGCTCTTTTCCAACTCTCTGTTTT--GATAATTGA 1037 consensus_9594#4 AGT-TAGCTGGTTTGTTGTTGTTGCCGGCAAGTGCTTTGTTTCCGTCACCGGACGCGTGG 251 *** * * * * * ** ** * * * ** ** ** ** consensus_9594#1 GCGG--------------------------------- 662 consensus_9594#3 TCAGTCGCTGCCACTCGTGNCG---CGATTCTTGGC- 547 consensus_9594#2 GCGG--------------------------------- 636 consensus_9594#0 TCAGTCGCTGCTGTTGCTGACCGGCCGATTCTTGCCT 1074 consensus_9594#4 GCGGACGCGTGGGCGG--------------------- 267 * * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||