These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9601#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1272 fasta sequence [GCGGCCGAGTTATTTGTTTACCGCATCGCACATCGCAAGGAAAGAGAGTAAATTTGGCTTTTTCTTCATCCCAGCAGACACACCAACAAGCGAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAAC-GGATTTCAAATCAACTGGATGATACTGC-GGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC-GACCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGCCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACAACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATTCGCCATTG-GCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTTTTTCCACTATCTTGCCCAGTTTCATGGGACCATCATATTATTATTAGGTAGTTTAGGTACGGACACACCAGCCATGCCAGGGAAACGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGTACTTAAGCGACAGTACAACGGCTACCATTCGACGATCACATCTGCCTCACGCGAGCAGCTTAGCAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACAGTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAAGTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAAT-CTTTTTTATACGAACGTGAGAGGCGCTGAACTGTGTATCTGCCTAAGTTCAGCTTCAAGGAAGCTGTGTCCCTTATTTTACAAAACGTTGAAATACATGTCACCAAAATGTACGTAAGGCGAAAAAAAAAAAA] [+] EMBL CNS09ASW [GCGGCCGAGTTATTTGTTTACCGCATCGCACATCGCAAGGAAGGAGAGTAAATTTGGCTTTTTCTTCACCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAAC GGATTTCAAATCAACTGGATGATACTGC GGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC GACCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGTTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAAGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGGGGGGCACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTCGAATTCGCCATTGAGCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTTTTTGCACTAACTTGCCCAGTTTCATGGGACCATCATATTATTCTTAGATAGTTTAGGTACGGACACACCAGCCATGCCAGGGAAGCGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGC ] [+] EMBL CNS097Z1 [ CGGCCGAGTTATTTGTTTACCGCATCGCACATCGCAAGGAAGGAGAGTAAATTTGGCTTTTTCTTCACCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAAC GGATTTCAAATCAACTGGATGATACTGC GGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC GACCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGTTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAAGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGGGGGGCACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTCGAATTCGCCATTGAGCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTTTTTGCACTAACTTGCCCAGTTTCATGGGACCATCATATTATTCTTAGATAGTTTAGGTACGGACACACCAGCCATGCCAGGGAAGCGCTTGGGCATTTCTGGCCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGA ] [+] EMBL CNS08QG5 [ GCATCGCACATCGCAAGGAAAGAGAGTAAATTTGGCTTTTTCTTCATCCCAGCAGACACACCAACAAGCGAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAAC GGATTTCAAATCAACTGGATGATACTGC GGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC GACCAGAAGGTCCTCTTAAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGCCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACAACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATTCGCCATTG GCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTTTTTCCACTATCTTGCCCAGTTTCATGGGACCATCATATTATTATTAGGTAGTTTAGGTACGGACACACCAGCCATGCCAGGGAAACGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACC AAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGTACTTAAGCGACAGTACAACGGCTACCATTCGACGATCACATCTGCCTCACGCGAGCAGCTTAGCAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACAGTGCACGCATC ] [+] EMBL CNS08RHO [ ATCGCACATCGCAA GAAAGAGAGT AATTTGGCTTTTTCTTCATCCCAGCAGACACACCAACAAGCGAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAAC GGATTTCAAATCAACTGGATGATACTGC GGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCAGACCAGAAGGTCCatc ] [+] EMBL CNS08T6C [ ATCGC CCTCGCAAGGAAAGAGAGTAAATTTGGCTTTTTCTTCATCCCAGCAGACACACCAACAAGCGAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAAC GGATTTCAAATCAACTGGATGATACTGC GGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC GACCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTACGGTTATACTACATCTAAGCCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACAACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATTCGCCATTG GCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTTTTTCCACTATCTTGCCCAGTTTCATGGGACCATCATATTATTATTAGGTAGTTTAGGTACGGACACACCAGCCATGCCAGGGAAACGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGT ] [+] EMBL BX602307 [ GCAAGGAAAGAGAGTAAATTTGGCTTTTTCTTCATCCCAGCAGACACACCAACAAGCGAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAAC GGATTTCAAATCAACTGGATGATACTGC GGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC GACCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAAC TCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGCCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACAACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATTCGCCATTG GCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACCCCGATTTGTT ] [+] EMBL BX628642 [ gGAGAGTAAATTTGGCTTTTTCTTCACCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAAC GGATTTCAAATCAACTGGATGATACTGC GGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC GATCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGTAGGGAACACGGTCGGGACTGC ] [+] EMBL CNS08LQQ [ TTTGGCTTTTTCTTCATCCCAGCAGACACACCAACAAGCGAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAACGGGATTTCAAATCAACTGGATGATACTGCGGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC GACCAGAAGGTCCTCTTCAAGGGGCGCATAAAAAAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGCCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACAACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATac ] [-] EMBL CNS08QG6 [ GAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTC GACCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGCCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACAACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATTCGCCATTG GCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGAACACACGCCGATTTGTTTTTCCACTATCTTGCCCAGTTTCATGGGACCATCATATTATTATTAGGTAGTTTAGGTACGGACACACCAGCCATGCCAGGGAAACGCTTGGGCATTTCTGGTCGGGTGAATATGAAACC AAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGTACTTAAGCGACAGTACAACGGCTACCATTCGACGATCACATCTGCCTCACGCGAGCAGCTTAGCAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACAGTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAAGTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAAT CTTTTTTATACGAACGTGAGAGGCGCTGAACTGTGTATCTGCCTAAGTTCAGCCTCAAGGAAGCTGTGTCCCTTATTTTACAAAACGTTGAAATACATGTCACCAtat ] [-] EMBL CNS08T6D [ ACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTACGGTTATACTACATCTAAGCCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACAACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATTCGCCATTG GCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGGACACACGCCGATTTGTTTTTCCACTATCTTGCCCAGTTTCATGGGACCATCATATTATTATTAGGTAGTTTAGGTACGGACACACCAGCCATGCCAGGGAAACGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGTACTTAAGCGACAGTACAACGGCTACCATTCGACGATCACATCTCCCTCACGCGAGCAGCTTAGCAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACAGTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAAGTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAAT CTTTTTTATACGAACGTGAGAGGCGCTGAACTGTGTATCTGCCTAAGTTCAGCTTCAAGGAAGCTGTGTCCCTTATTTTACAAAACGTTGAAATACATGTCACCGAAATGTACGTAAGGCGAAAAAA ] [-] EMBL CNS08RHP [ TAGTTTAGGTACGGATACACCAGCCATGCCAGGGAAACGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGTACTTAAGCGACAGTACAACGGCTACCATTCGACGATCACATCTGCCTCACGCGAGCAGCTTAGCAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACAGTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAAGTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAATACTTTTTTATACGAACGTGAGAGGCGCTGAACTGTGTATCTGCCTAAGTTCAGCTTCAAGGAAGCTGTGTCCCTTATTTTACAAAACGTTGAAATACATtc ] [-] EMBL CNS08LQR [ CAAAATGGGTTTTTTTCCATTCACACTCTAATCAAAAACTAAAACAGTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAAGTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAAT CTTTTTTATACGAACGTGAGAGGCGCTGAACTGTGTATCTGCCTAAGTTCAGCTTCAAGGAAGCTGTGTCCCTTTTTTTACAAAACGTTGAAATACATGTCACC AAATGTACGTAAAACAAAAAAAAAAAAA] consensusID : consensus_9601#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1221 fasta sequence [TCTTCACCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAACGGATTTCAAATGTAAGTGATGCAGCAACTACAGAGGAGTGATTGGTGTGTTTCCCTGTACGATTTGAGTCGTCTTTCGTCACTGTTTGCAGCAACTGGATGATACTGCGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCGATCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGTTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAAGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGGGGGGCACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTCGAATTCGCCATTGAGCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTTTTTGCACTAACTTGCCCAGTTTCATGGGACCATCATATTATTCTTAGATAGTTTAGGTACGGACACACCAGCCAT-GCCAGGGAAGCGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGTACTTAAGCGACAGCAGCTTAACAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACAGTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAAGTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAATCTTTTTTATACGAACGTGAGAGGCGCTGAACTGTGTATCTGCCTATGTTCAGCTTCCAGGAAGCTGTGTCCCTTATTTTACAAAACGTTGAAATACAT-TCACCAA] [+] EMBL BX625994 [TCTTCACCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAACGGATTTCAAATGTAAGTGATGCAGCAACTACAGAGGAGTGATTGGTGTGTTTCCCTGTACGATTTGAGTCGTCTTTCGTCACTGTTTGCAGCAACTGGATGATACTGCGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCGATCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAAAATTCGCCATTG GCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTTTTTGCACTAACTTGNCCAGTTTCATGGGACCATCATATTATTCTTANATAGTTTAGGTACNGACACACCAGCCATGGCCAGGGAAGCGCTTGGG ] [+] EMBL BM578055 [ ccgTGCGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCGATCAGAAGGTCCTCTTCAAGGGGC ] [-] EMBL CNS09ASX [ CGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGTTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAAGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGGGGGGCACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTCGAATTCGCCATTGAGCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTTTTTGCACTAACTTGCCCAGTTTCATGGGACCATCATATTATTCTTAGATAGTTTAGGTACGGACACACCAGCCAT GCCAGGGAAGCGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGTACTTAAGCGACAGCAGCTTAACAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACAGTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAAGTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAATCTTTTTTATACGAACGTGAGAGGCGCTGAACTGTGTATCTGCCTATGTTCAGCTTCCAGGAAGCTGTGTCCCTTATTTTACAAAACGTTGAAATACAT TCACCAA] [-] EMBL CNS097Z2 [ tGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGTTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAAGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGGGGGGCACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTCGAATTCGCCATTGAGCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGAACACACGCCGATTTGTTTTTGCACTAACTTGCCCAGTTTCATGGGACCATCATATTATTCTTAGATAGTTTAGGTACGGACACACCAGCCAT GCCAGGGAAGCGCTTGGGCATTTCTGGCCGGGTGAATCTGAAACCAAAAAAAAAAAACACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAAAAGGATGCAAAGGACACACAGACACATTGTACTTAAGCGACAGCAGCTTAACAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACAGTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAAGTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAATCTTTTTTATACGAACGTGAGAGGCGCTGAACTGTGTATCTGCCTATGTTCAGCTTCCAGGAAGCTGTGTCCCTTATTTTACAAAACGTTGAAATACATGTCAC ] consensusID : consensus_9601#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence [AGGCAGAATCCGGCACNAGGCCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAACGGATTTCAAATCAACTGGATGATACTGCGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGTCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCGATCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAGGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTGCAAAACGNAGCCCGAACGTAGGGGAAACACGGGTCGGGGACTGGTAGGTTCAAATCATTTANCCAACCGAAAGCTCCTTAGAATTTCCGCCATTGGGCCNTTCGCTTGCTGAATGTTGGTANCGGGCACTAAAGGGACACAAGC] [+] EMBL BX468279 [AGGCAGAATCCGGCACNAGGCCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAAGGGGAGAAAATTCTAAACGGATTTCAAATCAACTGGATGATACTGCGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCCCGGACGTCGAGCACGAGGCGAAGGTGTCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGCGGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCGATCAGAAGGTCCTCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACACGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCAAAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAGGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTGCAAAACGNAGCCCGAACGTAGGGGAAACACGGGTCGGGGACTGGTAGGTTCAAATCATTTANCCAACCGAAAGCTCCTTAGAATTTCCGCCATTGGGCCNTTCGCTTGCTGAATGTTGGTANCGGGCACTAAAGGGACACAAGC] consensusID : consensus_9601#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 582 fasta sequence [GCCCGAGGTTTACGTGACATCGAGACGAGCTTTACGATNGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATTCGCCATTGGCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTATTATGCACTTAACTTGGCCCCCAANGGTTATTTTACCATTGGGGGGAACCCCAATTTCCAAATTAATTTCTTCCAACTTTTCCCTTTTAAGGAAATTTAAGGTTATACNTAGGGTAACAGGGAAACACGAACCCAGGCCCATGCCCAGGGGAAGCGGCTTGGGGCATTTCCTAGGTCCGGGTTGAAATCTTGAAAGAACCCAACATACACAACAGNACAGAAGACACAACCCTCAAGCGACTCTCATTGCTTGCCACAAGCAACGCGCCCAANGCACACATGATGCAAACAGGGACACACAGACCACAGTTGGTACTTACA] [+] EMBL AL693741 [GCCCGAGGTTTACGTGACATCGAGACGAGCTTTACGATNGGCGACACGCTCATCAGCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAGGGGGCGGGCCGGGGTGGGATGATGCCCGCGCGTGTTCAAACGACCGAACGTAGGGAACACGGTCGGGACTGCTAGTTCAAATCATTTTTCAACGAACTCCTTAGAATTCGCCATTGGCCATTCGCTTGCTGATGTGGTACGGCACTAAAGGCACACACGCCGATTTGTATTATGCACTTAACTTGGCCCCCAANGGTTATTTTACCATTGGGGGGAACCCCAATTTCCAAATTAATTTCTTCCAACTTTTCCCTTTTAAGGAAATTTAAGGTTATACNTAGGGTAACAGGGAAACACGAACCCAGGCCCATGCCCAGGGGAAGCGGCTTGGGGCATTTCCTAGGTCCGGGTTGAAATCTTGAAAGAACCCAACATACACAACAGNACAGAAGACACAACCCTCAAGCGACTCTCATTGCTTGCCACAAGCAACGCGCCCAANGCACACATGATGCAAACAGGGACACACAGACCACAGTTGGTACTTACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9601#1 ----------------------------------------------------------T- 1 consensus_9601#2 --------------------------------------------AGGCAGAATCCGGCA- 15 consensus_9601#0 GCGGCCGAGTTATTTGTTTACCGCATCGCACATCGCAAGGAAAGAGAGTAAATTTGGCTT 60 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 ---CTTCACCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAA 58 consensus_9601#2 ---CNAGGCCCCAGCAGACACACCAACAAGCTAGCAATGGGCACGGACGATCTCGGTAAA 72 consensus_9601#0 TTTCTTCATCCCAGCAGACACACCAACAAGCGAGCAATGGGCACGGACGATCTCGGTAAA 120 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 GGGGAGAAAATTCTAAACGGATTTCAAATGTAAGTGATGCAGCAACTACAGAGGAGTGAT 118 consensus_9601#2 GGGGAGAAAATTCTAAACGGATTTCAAAT------------------------------- 101 consensus_9601#0 GGGGAGAAAATTCTAAACGGATTTCAAAT------------------------------- 149 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 TGGTGTGTTTCCCTGTACGATTTGAGTCGTCTTTCGTCACTGTTTGCAGCAACTGGATGA 178 consensus_9601#2 -------------------------------------------------CAACTGGATGA 112 consensus_9601#0 -------------------------------------------------CAACTGGATGA 160 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 TACTGCGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCC 238 consensus_9601#2 TACTGCGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCC 172 consensus_9601#0 TACTGCGGGATGCGGACACGGGTAAGATCATCTGGCAGGAGAACAAGGACTTCTCCTGCC 220 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 CGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGC 298 consensus_9601#2 CGGACGTCGAGCACGAGGCGAAGGTGTCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGC 232 consensus_9601#0 CGGACGTCGAGCACGAGGCGAAGGTGCCGGTCAAGATACTCAGCTTGCGTGCCGTGTCGC 280 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 GGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCGATCAGAAGGTCC 358 consensus_9601#2 GGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCGATCAGAAGGTCC 292 consensus_9601#0 GGGAAATCAACTTCAGCACCGTCGAGGCGATGGAAAACTTTCGACTCGACCAGAAGGTCC 340 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 TCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACA 418 consensus_9601#2 TCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACA 352 consensus_9601#0 TCTTCAAGGGGCGCATTATGGAGGAATGGTTTTTCGAGATGGGATGGGTCAGCCCGAACA 400 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 CGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCA 478 consensus_9601#2 CGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCA 412 consensus_9601#0 CGACCAACACCTGGCAGTCGACCATCGAGGCCGCGCCCGAGTCGCAGATGATGCCGGCCA 460 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 AAGTGCTGAACGGCAACGTGACCATCGAGACGAGTTTTTACGACGGCGACACGCTCATCA 538 consensus_9601#2 AAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCA 472 consensus_9601#0 AAGTGCTGAACGGCAACGTGACCATCGAGACGAGCTTTTACGACGGCGACACGCTCATCA 520 consensus_9601#3 ----GCCCGAGGTTTACGTGAC-ATCGAGACGAGCTTTACGATNGGCGACACGCTCATCA 55 ** * * ******* *********** *** **************** consensus_9601#1 GCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAAGGGG-CGGGCCGGGGTGGGATGA 597 consensus_9601#2 GCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAGGGGGGCGGGCCGGGGTGGGATGA 532 consensus_9601#0 GCAAGTCGGTGGTGCGGTTATACTACATCTAAGCCAGGGGG-CGGGCCGGGGTGGGATGA 579 consensus_9601#3 GCAAGTCGGTGGTGCGGTTATACTACATCTAAGGCAGGGGG-CGGGCCGGGGTGGGATGA 114 ********************************* ** **** ****************** consensus_9601#1 TGCCCGCGCGTGTTCAAA-CGA---CCGAACG--GGGGGCACACGGTC--GGGACTGCTA 649 consensus_9601#2 TGCCCGCGCGTGTGCAAAACGNAGCCCGAACGTAGGGGAAACACGGGTCGGGGACTGGTA 592 consensus_9601#0 TGCCCGCGCGTGTTCAAA-CAA---CCGAACGT--AGGGAACACGGTC--GGGACTGCTA 631 consensus_9601#3 TGCCCGCGCGTGTTCAAA-CGA---CCGAACGT--AGGGAACACGGTC--GGGACTGCTA 166 ************* **** * ******* ** ****** ******* ** consensus_9601#1 G-TTCAAATCATTT-TTCAAC---GAACTCCTTCGAATT--CGCCATTGAGCCATTCGCT 702 consensus_9601#2 GGTTCAAATCATTTANCCAACCGAAAGCTCCTTAGAATTTCCGCCATTGGGCCNTTCGCT 652 consensus_9601#0 G-TTCAAATCATTT-TTCAAC---GAACTCCTTAGAATT--CGCCATTG-GCCATTCGCT 683 consensus_9601#3 G-TTCAAATCATTT-TTCAAC---GAACTCCTTAGAATT--CGCCATTG-GCCATTCGCT 218 * ************ **** * ****** ***** ******** *** ****** consensus_9601#1 TGCTGA-TGT-GGTAC--GGCACTAAAGGCACACACGCCGATTTGTTTTTGCACTAACTT 758 consensus_9601#2 TGCTGAATGTTGGTANCGGGCACTAAAGGGACACAAGC---------------------- 690 consensus_9601#0 TGCTGA-TGT-GGTAC--GGCACTAAAGGCACACACGCCGATTTGTTTTTCCACTATCTT 739 consensus_9601#3 TGCTGA-TGT-GGTAC--GGCACTAAAGGCACACACGCCGATTTGTATTATG--CACTTA 272 ****** *** **** *********** ***** ** consensus_9601#1 GCCCAGTTTCATGGGACCATCATATTATTCTTAGATAGTTTAGGTACGGACACACCAGCC 818 consensus_9601#2 ------------------------------------------------------------ consensus_9601#0 GCCCAGTTTCATGGGACCATCATATTATTATTAGGTAGTTTAGGTACGGACACACCAGCC 799 consensus_9601#3 ACTTGGCCCCCAANGGTTATTTTACCATTGGGGGGAACCCCAATTTCCAAATTAATTTCT 332 consensus_9601#1 ATGCCAGGGAAGCGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAAC 878 consensus_9601#2 ------------------------------------------------------------ consensus_9601#0 ATGCCAGGGAAACGCTTGGGCATTTCTGGTCGGGTGAATCTGAAACCAAAAAAAAAAAAC 859 consensus_9601#3 TCCAACTTTTCCCTTTTAAGGAAATTTAAGGTTATACNTAGGGTAACAGGGAAACACGAA 392 consensus_9601#1 ACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAA---AAGGATGCAAAGGACACAC 935 consensus_9601#2 ------------------------------------------------------------ consensus_9601#0 ACCTCAACGCTCTCATTGCTGCACAAGCAACGGCAAAA---AAGGATGCAAAGGACACAC 916 consensus_9601#3 CCCAGGCCCATGCCCAGGGGAAGCGGCTTGGGGCATTTCCTAGGTCCGGGTTGAAATCTT 452 consensus_9601#1 AGACACATTGTACTTAAGCGACAG------------------------------------ 959 consensus_9601#2 ------------------------------------------------------------ consensus_9601#0 AGACACATTGTACTTAAGCGACAGTACAACGGCTACCATTCGACGATCACATCTGCCTCA 976 consensus_9601#3 GAAAGAACCCAACATACACAACAGNACAGAAGACACAACCC-----------TCAAGCGA 501 consensus_9601#1 ------CAGCTTAACAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACA 1013 consensus_9601#2 ------------------------------------------------------------ consensus_9601#0 CGCGAGCAGCTTAGCAAAATGGGTTTTTTTCGATTCACACTCTAATCAAACACTAAAACA 1036 consensus_9601#3 CTCTCATTGCTTGCCACAA-GCAACGCGCCCAANGCACACATGATGCAAACAGGGACACA 560 consensus_9601#1 GTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAA 1073 consensus_9601#2 ------------------------------------------------------------ consensus_9601#0 GTGCACGCATCAAGGGGCGCCCGACTATGCTAGCATGTAATGATGAATGTTATAATGTAA 1096 consensus_9601#3 CAGACCACAGTTGGTACTTACA-------------------------------------- 582 consensus_9601#1 GTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAATCTTTTTTATACGAACGT 1133 consensus_9601#2 ------------------------------------------------------------ consensus_9601#0 GTAATCACAGAATTAAGCACCATTTTTTAATGTATAAGTCAATCTTTTTTATACGAACGT 1156 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 GAGAGGCGCTGAACTGTGTATCTGCCTATGTTCAGCTTCCAGGAAGCTGTGTCCCTTATT 1193 consensus_9601#2 ------------------------------------------------------------ consensus_9601#0 GAGAGGCGCTGAACTGTGTATCTGCCTAAGTTCAGCTTCAAGGAAGCTGTGTCCCTTATT 1216 consensus_9601#3 ------------------------------------------------------------ consensus_9601#1 TTACAAAACGTTGAAATACAT-TCACCAA--------------------------- 1221 consensus_9601#2 -------------------------------------------------------- consensus_9601#0 TTACAAAACGTTGAAATACATGTCACCAAAATGTACGTAAGGCGAAAAAAAAAAAA 1272 consensus_9601#3 -------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||