These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9607#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 753 fasta sequence [CTGTTGGCCAACTGGATTTTGCAATTGCACCGGCGCACAGGCAGGCAGCATTATAACGGAACCGCT--TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGT-GGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGT-AAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGG-AGAAATAAATT-GTGCTGC--GATGGCTGCG-CCTTTGGCGGGGGGCGGCAGATGAAC-GTTCCAGCCCGTCGCATCATGTTTTACAAACCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGC] [-] EMBL CNS090QW [CTGTTGGCCAACTGGATTTTGCAATTGCACCGGCGAACAGGCAGGCAGCATTATAACGGAACCGCT TCCCACAGCAACCATCAAAACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTTACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGAAAACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGT GGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGT AAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGG AGAAATAAATT GTGCTGCGGGATTG TGC CCTTTGGCGGGGGGCGGCAGATGAAC GTTCC ] [+] EMBL CNS09194 [ cctactggTGCACCGGCGCACAGGCAGGCAGCATTATAACGGAACCGCT TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGGCATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGT GGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGT AAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGG AGAAATAAATT GTGCTGC GATGGCTGCG CCTTTGGCGGGGGGCGGCAGATGAAC GTTCCAGCCCGTCGCATCATGTTTTACAAACCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGC] [+] EMBL BM607788 [ ccgGGCGCACAGGCAGGCAGCATTATAACTGAACCGCT TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGGCCTCTCGTTGGCCATCGCCTACTTTGCCACCGGGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAAGACCGTGGTGCACAAGCACAAGAAGCGCTACGAGGGCGTACCAGTAACGCGACGGGAAGAAATAAATTGGTGCTGC GATGGCTGCGCCCTTTG ] [-] EMBL CNS09195 [ GCGCACAGGCAGGCAGCATTATAACGGAACCGCT TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGGCATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGT GGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGT AAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGG AGAAATAAATT GTGCTGC GATGGCTGCG CCTTTGGCGGGGGGCGGCAGATGAAC GTTCCAGCCCGTCGCATCATGTTTTACAAACCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG ] [+] EMBL BM581562 [ cCGCACAGGCAGGCAGCATTATAACGGAACCGCTCATCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGT GGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGT AAGACCGTGTGGCACAAGCACAAAAAGTGCTACGAGGGCGTACCAGTAACGCAACGGG AGAAATAAATT GTGCTGC GATGGCTGCG CCTTTGGCGGGGGGCGGCAGATGAAC GTTCCAGCCCGTCGCATCATG ] [+] EMBL CNS08XHP [ CGCACAGGCAGGCAGCATTATAACGGAACCGCT TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGT GG CTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGT AAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGG AGAAATAAATT GTGCTGC GATGGCTGCG CCTTTGGCGGGGGGCGGCAGATGAAC GTTCCAGCCCGTCGCATCATGTTTTACAAA AAAAAAAAAACAAAg ] [+] EMBL BM652438 [ ccgGGCAGGCAGCATTATAACGGAACCGCTCATCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGT GGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGT AAGACCGTGTGGCACAAGCACAAAAAGTGCTACGAGGGCGTACCAGTAACGCAACGGG AGAAATAAATT GTGCTGC GATGGCTGCG CCTTTGGCGGGGGGCGGCAGATGAACGGTTCCAGCCCGTC ] [+] EMBL BM655410 [ ccgGGCAGGCAGCATTATAACTGAACCGCT TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGT GGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGT AAGACCGTGGTGCACAAGCACAAGAAGCGCTACGAGGGCGTACCAGTAACGCGACGGG AGAAATAAATT GTGCTGC GATGGCTGCG CCTTTGGCGGGG ] consensusID : consensus_9607#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 697 fasta sequence [CCGGTGTGAGTGTTTTTGTTTTAATTTCCTTTCCATATCGTGCAATCGTTTCTTGATCGACAGGAACCGCTTCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTGCGATGGCTGCGCCTTTGGCGGGGGGCGGCAGATGAACGTTCCAGCCCGTCGCATCA] [+] EMBL BM578157 [CCGGTGTGAGTGTTTTTGTTTTAATTTCCTTTCCATATCGTGCAATCGTTTCTTGATCGACAGGAACCGCTTCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTGCGATGGCTGCGCCTTTGGCGGGGGGCGGCAGATGAACGTTCCAGCCCGTCGCATCA] [-] EMBL CNS08XHQ [ AGGAGGTGTTCCGAACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTAACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGGTCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGAACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCG ] consensusID : consensus_9607#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 623 fasta sequence [CCGGGCAGGCAGCATTATAACGGTGAGGCAACATTAGAGCGTAGCCTCTGTGAACCGCTCATCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAAACCGTGTGGCACAAGCACAAAAAGTGCTACGAGGGCGTACCAGTAACGCAACGGGAGAAATAAA] [+] EMBL BM628303 [CCGGGCAGGCAGCATTATAACGGTGAGGCAACATTAGAGCGTAGCCTCTGTGAACCGCTCATCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAAACCGTGTGGCACAAGCACAAAAAGTGCTACGAGGGCGTACCAGTAACGCAACGGGAGAAATAAA] [+] EMBL AY278446 [ CTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTT ] [+] EMBL BM640004 [ TACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGGTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTC ] [-] EMBL CNS08FEM [ GAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGGTC ] consensusID : consensus_9607#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 614 fasta sequence [CCGCGGACGCGTGGGCAGGCAGGCAGCATTATAACGGAACCGCT--TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTG] [+] EMBL BM597630 [CCGCGGACGCGTGGGCAGGCAGGCAGCATTATAACGGAACCGCT TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTG] [+] EMBL BM605055 [ ccgGGCAGGCAGCATTATAACGGAACCGCTCATCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCC ] [+] EMBL CNS08FEL [ TAACGGAACCGCT TCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCTGGTGGTGAAGATGCTGGCCATGTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGTTCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGG CTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTGTGGCACAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGG ] consensusID : consensus_9607#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 561 fasta sequence [GCGGAATTCCTCGAGAACTGTTGGCCAACTGGATTTTGCAATTGCACCGGCGCACAGGCAGGCAGCATTATAACGGAACCGCTTCCCACAGCAACCATCAAAACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATTTGGAGAAAATTTTGCCGTTTTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGAAAACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTTTGGCAAAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTGC] [-] EMBL CNS08ZI0 [GCGGAATTCCTCGAGAACTGTTGGCCAACTGGATTTTGCAATTGCACCGGCGCACAGGCAGGCAGCATTATAACGGAACCGCTTCCCACAGCAACCATCAAAACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGGTGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACGATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATTTGGAGAAAATTTTGCCGTTTTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACCTGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGAAAACGCTCGTGTACGCGGTGGTCGTGATTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGGCGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTTTGGCAAAAGCACAAAAAGCGCTACGAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9607#1 CCGGTGTGAGTGTTTTTGTTTTAATTTCCTTTCCATATCGTGCAATCGTTTCTTGATCGA 60 consensus_9607#2 CCGG-GCAGGCAGCATTATAACGGTGAGGCAACATTAGAGCGTAGCC-TCTGTGAACCG- 57 consensus_9607#3 -----------------------CCGCGGACGCGTGGGCAGGCAGGCAGCATTATAACG- 36 consensus_9607#0 CTGTTGGCCAACTGGATTTTGCAATTGCACCGGCGCACAG-GCAGGCAGCATTATAACG- 58 consensus_9607#4 ------------------------------------------------------------ consensus_9607#1 CAGGAACCGCTTCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGAC 120 consensus_9607#2 -------CTCATCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGAC 110 consensus_9607#3 ---GAACCGCTTCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGAC 93 consensus_9607#0 ---GAACCGCTTCCGACAGCAACCATCAACACATAAATTCCGCCAATCAAACATGACGAC 115 consensus_9607#4 ---------------GCGGAATTCCTCGAGAACTG---TTGGCCAACTGGATTTTGCAAT 42 * * * * ** * * * * ***** * * * * consensus_9607#1 CCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCT 180 consensus_9607#2 CCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCT 170 consensus_9607#3 CCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCT 153 consensus_9607#0 CCTGCTGCAGAACGTGAACGAGGAGGTGTTCCGGACGTACGTCTTCTGGACGGCGGTGCT 175 consensus_9607#4 TGCACCGGCGCACAGGCAGGCAGCATTATAACGGAACCGCTTCCC----ACAGCAACCAT 98 * * * ** * * * * * * **** * ** ** ** * consensus_9607#1 GGTGGTGAAGATGCTGGCCAT-GTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGG 239 consensus_9607#2 GGTGGTGAAGATGCTGGCCAT-GTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGG 229 consensus_9607#3 GGTGGTGAAGATGCTGGCCAT-GTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGG 212 consensus_9607#0 GGTGGTGAAGATGCTGGCCAT-GTCCGTGCTGACTGGCCGCCAGCGCTTCCGCAAGAAGG 234 consensus_9607#4 CAAAACATAAATTCCGCCAATCAAACATGACGACCCTGCTGCAGAACGTGAACGAGGAGG 158 * ** * * * ** * ** *** * *** * * * ** *** consensus_9607#1 TGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACG 299 consensus_9607#2 TGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACG 289 consensus_9607#3 TGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACG 272 consensus_9607#0 TGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACG 294 consensus_9607#4 TGTTCGCCAATCCGGAAGACATCCAGCCCAGCAAGAAGGGCGCCCAGCCCAAGTTCGACG 218 ************************************************************ consensus_9607#1 ATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGT 359 consensus_9607#2 ATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGT 349 consensus_9607#3 ATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGT 332 consensus_9607#0 ATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATCTGGAGAACATTCTGCCGT 354 consensus_9607#4 ATCCGGACGTGGAGCGCGTGCGCCGGGCCCATCGTAACGATTTGGAGAAAATTTTGCCGT 278 ***************************************** ******* *** ****** consensus_9607#1 TCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACC 419 consensus_9607#2 TCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACC 409 consensus_9607#3 TCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACC 392 consensus_9607#0 TCTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACC 414 consensus_9607#4 TTTTTGCCATCGGGCTGCTGTACATGCTGACCAACCCGGAGCCGTTCATCGCGATCAACC 338 * ********************************************************** consensus_9607#1 TGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGA 479 consensus_9607#2 TGTTCCGGGCGGTCGCCATCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGA 469 consensus_9607#3 TGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGA 452 consensus_9607#0 TGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGCACACGCTCGTGTACGCGGTGGTCGTGA 474 consensus_9607#4 TGTTCCGGGCGGTCGCCGTCGCCCGCATCGTGAAAACGCTCGTGTACGCGGTGGTCGTGA 398 ***************** ************** * ************************* consensus_9607#1 TTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGG 539 consensus_9607#2 TTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGG 529 consensus_9607#3 TTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGG 512 consensus_9607#0 TTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGG 534 consensus_9607#4 TTCCCCAGCCGGCCCGTGGCCTCTCGTGGGCCATCGCCTACTTTGCCACCGCGTACATGG 458 ************************************************************ consensus_9607#1 CGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTGTGGCACAAGCACAAAAAGCGCTAC 599 consensus_9607#2 CGGTCAAGACGGCCCTGTTCTTCCTGTAAAACCGTGTGGCACAAGCACAAAAAGTGCTAC 589 consensus_9607#3 CGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTGTGGCACAAGCACAAAAAGCGCTAC 572 consensus_9607#0 CGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTGTGGCACAAGCACAAAAAGCGCTAC 594 consensus_9607#4 CGGTCAAGACGGCCCTGTTCTTCCTGTAAGACCGTTTGGCAAAAGCACAAAAAGCGCTAC 518 ***************************** ***** ***** ************ ***** consensus_9607#1 GAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTGCGATGGCTGCGCCTTTGG 659 consensus_9607#2 GAGGGCGTACCAGTAACGCAACGGGAGAAATAAA-------------------------- 623 consensus_9607#3 GAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTG------------------ 614 consensus_9607#0 GAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTGCGATGGCTGCGCCTTTGG 654 consensus_9607#4 GAGGGCGTACCAGTAACGCGACGGGAGAAATAAATTGTGCTGC----------------- 561 ******************* ************** consensus_9607#1 CGGGGGGCGGCAGATGAACGTTCCAGCCCGTCGCATCA---------------------- 697 consensus_9607#2 ------------------------------------------------------------ consensus_9607#3 ------------------------------------------------------------ consensus_9607#0 CGGGGGGCGGCAGATGAACGTTCCAGCCCGTCGCATCATGTTTTACAAACCGAAAAAAAA 714 consensus_9607#4 ------------------------------------------------------------ consensus_9607#1 --------------------------------------- consensus_9607#2 --------------------------------------- consensus_9607#3 --------------------------------------- consensus_9607#0 AAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGC 753 consensus_9607#4 --------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||