|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9619#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2363 fasta sequence
[ACGTTTTCCTGGGAGTTCACAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACATTGCACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTACTGCCGCTTCGGAATCCCAATCCCCTTCAAATCCCAACCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGG-ATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGT-T-TGTATGTGTGTGTTTGTTTGTGGGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCCTTTACCATCTCCGACGTTTCACCGACCTGCAGCACCAGCGCCATACCGACGGCCGTGTGCCACTCGTAATGGCAGTGCATCAGCCAGAAGCCTGGGTTGTCCGCACGGAAGCGGACACGTGCGTA-CCGCGGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTAACCGCTGCCGGGCTATGTTTTGCGCGATTTCGAGCGTAATCGGTACCCGTCGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCACCGAGGGCGTTAGATCGAGAATGTACAGTTCTACGATATCGCCGAGGTTGATCTTTACCCGATGGGTGCAGGTGCAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGCAGAATGTGTCGTCACGG-ATTTTCTCCGGCTGGGTGAGCAGTGAGAATGGTGGGTATGCGAGGCTGATGTTGTTGATCGCTCCTTGCATCATTACCGAACCGTAGATATTCATATAGTGCTCATATCGGTTCGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAACGTTAGCTGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTGTCGTACGCTTGAAAGTCGGTGATACAATAGTCACCAAACTCTGGGCGTCCACAGGTGGCATTCGGATGGTTCGCTGTGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTGGGAAGGCATCGTTAATAAACGGCCCAGTGGTGTATCTCAGCACGGCAAACTGCTCCAACTGCAAGTCCGCGCAAGGTCCAAGGGAACGCAAACGTACCCAATAAGTGTCTTTAACA-CCGTTT-GCTT-CCAGCACGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGT-GTCAACTTTGCGTGG-CTGCAGA-TGGAAGGAATCGCT-CGCAATCAC-TTCCATCATGTGATCTTCAATCTGGAG-C-TGCAGCGGACACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAATCGTGCCCCACGCCGTACCGTATACACCTCCAACGGCGTT-TGGGTAGTTTCA-TTCTTCT-TCGGATCGTGGTACGTCCCCTTTCCGTTGATCAGCAGATTGATCGGCATAATTCCGCCGGCG-GAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTCTTAGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGAGTCGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCCGGATGGTAGCAGTCCGTATGGTTGCGCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGCTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTTGCACTCGCGTAAACACTGCTCGCCCGGAAATGTGGTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGGCGCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGATTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACCTTTTTTTTGTTTGCGCGTAAACTTGTCATCGCGCACTAGAC]
[-] EMBL BM656399 [ACGTTTTCCTGGGAGTTCACAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACATTGCACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTACTGCCGCTTCGGAATCCCAATCCCCTTCAAATCCCAACCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGG ATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGT T TGTATGTGTGTGTTTGTTTGTGGGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCcgg ]
[+] EMBL CNS08FC0 [ aaAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACAATGAACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTGCTGTCGCTTCGAAATCCCAATCCCCTTCAAATCCCAGCCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGG ATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGT G AATGTGTGTGTGTTTGTTTGTGGGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCCTTTACCATCTCCGACGTTTCACCGACCTGCAGCACCAGCGCCATACCGACGGCCGTGTGCCACTCGTAATGGCAGTGCATCAGCCAGAAGCCTGGGTTGTCCGCACGGAAGCGGACACGTGCGTA CCGCGGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTAACCGCTGACGGGCTATCTTTTGCGCGATTTCGAGCGTAATCGGTACCCGTCGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCACCGAGGGCGTTAGATCGAGGATGTACAGTTCTACGATATCGCCGAGGTTGATCTTTACCCTATGCGTGCAGGTACAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGCAGAATGTGTCGTCACGGAATTAAAAAAAAATGGGTGAGCAGTGAGAATGGTGGGTTTGCGAGGCTGATGTTGTTGATCGCTCCT ]
[-] EMBL BM611787 [ AGATCAATGCGAGCTGAGAAGCGACCGATAAGCGGAATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGTGTATGTATGTGTGTGTTTGTTTGTGGGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCTTTAACCATCTCCGACGTTTCGCCGACCTGCAGCACCAGAGCCATACCGACGGCCGTGTGCCACTCGTAATGGCAGTGCATCAGCCAGAAGCCAGGATTGTTCGCACGGAAGCGGACACGTGCGTAGCCGCGGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTAACCGCTGCCGGGCTATGTTTTGCGCAATTTCGAGCGTAATCGGTACCCGACGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCACCGAGGGCGTTAGATCGAGAATGTACAATTCTACGATATCGCCGAGGTTGATCTTTACCCGATGGGTGCAGGTGCAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTTCTCATCGCAGAATGTGTCGTCGCGG ATTTTCTCCGGCTGGGcgg ]
[-] EMBL BX624656 [ TTGTTCAGCTCACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCCTTTACCATCTCCGACGTTTCACCGACCTGCAGCACCAGCGCCATACCGACGGCCGTGTGCCACTCGTAATGGCAGTGCATCAGCCAGAAGCCTGGGTTGTCCGCACGGAAGCGGACACGTGCGTAGCCGCGGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTAACCGCTGCCGGGCTATGTTTTGCGCAATTTCGAGCGTAATCGGTACCCTTCGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTCAGATCGTTCACCGAGGGCGTTAGATCGAGAATGTACAGTTCCACAATATCGCCGAGGTTGATCTTTACCCGATGGGTGCAGGTGCAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGCAAAATGTGTCGTCACGG ATTTTCTCCGGCTGGGTGAGCAGTGAGAATGGTGGGTAGGCCAGGCTGATATTGTTGATCGCTCCTTGCATCATTACCGAACCGTAGATATTCATATAGTGCTCATATCGGTTCGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAACGTT ]
[-] EMBL BM596156 [ GGAAGCGCCACGGTGTTGCGCGACAGTAACCGTTGCCGGGCTATGTTTTTCGCGATTTCGAGCGTAATCGGTACCCGTCGATCTTGGCTCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCACCGAGGGCGTTAGATCGAGAATGTACAGTTCTACGATATCGCCGAGGTTGATCTTTACCCGATGGGTGCAGGTGCAGAGCTGCCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGCAGAATGTGTCGTCACGG ATTTTCTCCGGCTGGGTGAGCAGTGAGAATGGTGGGTATGCGAGGCTGATGTTGTTGATCGCTCCTTGCATCATTACCGAACCGTAGATATTCATATAGTGCTCATATCGATTCGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAAGGTTAGCTGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTGTCGTACGCTTGAAAGTCGGTGATACAATAGTCACCAAACTCTGGGCGTCCACAGGTGGCATTCGGATGGTTCGCTGTGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTCGG ]
[-] EMBL BM608667 [ CTTGCATCATTACCGAACCGTAGATATTCATATAGTGCTCATATCGGTTAGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAACGTTAGATGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTGTCGTACGCTTGAAAGTCGGTGATACAATAGTCACCAAACTCCGGTCGTCCACAGGTGGCATTCGGATGGTTCGCCGTGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTGGGAAGGCATCGTTAATAAACGGCCCAGTGGTGTATCTCAGCACGGCAAACTGCTCCAACTGCAAGTCCGCGCAAGGTCCAAGGGAACGCAAACGTACCCAATAAGTGTCTTTAACA CCGTTT GCAT CCAGCACGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGT GTCAACTTTGCGTGG CTGCAGA TGGAAGGAATCGCT CGCAATCAC CTCCATCATGTGATCTTCAATCTGCAG C TGCAGCGGACACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAACCGTGCCCCACGCCGTACCGTATACACCTCCAACGGTGTT TGGGTAGTTTCA TTCTTCT TCGGATCGTGGTACGTCCCCTTTCCGTTGATCAGCAcgg ]
[-] EMBL BX628825 [ ATATAGTGCTCATATCGATTCGACTCAANCATGCTCTCGAAGCTANCAGGATAGTTGTAGAAACCAAAGGTTAGCTGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTATCGTACGCCTGAAAGTCGGTGATACAATAGTCACCAAACTCTGGGCGTCCACAGGTGGCATTCGGATGGTTCGCTGTGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTGGGAAGGCATCGTTAATAAACGGCCCTGTAGTGTATCTTAGCACGGCAAACTGCTCCAACTGCAAGTCCGCGCAAGGTCCAAGGGAACGCAAACGTACCCAATAAGTGTCTTTAACA CCGTTT GCTT CCAGCACGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGT GTCAACTTTGCGTGG CTGCAGA TGGAAGGAATCGCT CGCAATCAC TTCCATCATGTGATCTTCAATCTGGAG C TGCAGCGGACACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAATCGTGCCCCACGCCGTACCGTATACACTTCCAACGGCGTT TGGGTAGTTTCA TTCTTCT TCGGATCGTGATACGTCCCCTTTCCGTTGATCAGCAGATTGATCGGCATAATTCCGCCGGCG GAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCC ]
[-] EMBL BX619434 [ anATAAGTGTCTTTAACACCCGTTTAGCTTNCCAGCACGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGTNGTCAACTTTGCGTGGACTGCAGATTGGAAGGAATCGCTACGCAATCACATTCCATCATGTGATCTTCAATCTGGAGNCNNGCAGCGGACACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAATCGTGCCCCACGCCGTACCGTATACACTTCCAACGGCGTTATGGGTAGTTTCATTTCTTCTNTCGGATCGTGATACGTCCCCTTTCCGTTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGNNAAGGCAACCCGGGCATAAAC ]
[-] EMBL CNS08FBZ [ CACCTCCAACGGCGTT TGGGTAGTTTCA TTCTTCT TCGGATCGTGGTACGTCCCCTTTCCATTGATCAGCAGATTGATCGGCATAATTCCGCCGGCG GAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTCTTAGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGAGTCGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCCGGATGGTAGCAGTCCGTATGGTTGCGCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGCTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTTGCACTCGCGTAAACACTGCTCGCCCGGAAATGTGGTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGGCGCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGATTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACCTTTTTTTTGTTTGCGCGTAAACTTGTCATCGCGCACTAGAC]
consensusID : consensus_9619#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 924 fasta sequence
[GTACGTCCCCTTTCCATTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGGAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTC-TTGGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCTCCAGTCAACCGGGACCGG]
[-] EMBL BX606566 [GTACGTCCCCTTTCCATTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGGAAGGCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTC TTGGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTTCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCTGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCTCGTTCGACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTTAAACTCG ]
[-] EMBL BM595127 [ GCAACCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTC TTGGGCTCTCGCACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGTTGGGTATTGTCGCACTCGCGCAAACACTGCcgg ]
[-] EMBL BM601643 [ CCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTC TTAGGCTCTCGCACTATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGTTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCGCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGg ]
[-] EMBL BM606818 [ GTTCGGATCCACTCTCTTTAGGCTCCCGTACGATCAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAATGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCAAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCcgg ]
[-] EMBL BM579741 [ GTGCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGTAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCGAGCAGGACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCcgg ]
[-] EMBL BM614852 [ GCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGTAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCGAGCAGGACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCTCCAGTCAACCGG ]
[-] EMBL BM609206 [ ATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCGGCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAATGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTCGCGTACGCGACCACTAGCACACCAAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAACTTTAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCTTCAGTCAACCCGG ]
[-] EMBL BM587333 [ AGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCACACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGTCCGTATGGTTGCCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCCGTGGTTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGAGCGTCCCGTTAGATTGCTCGAGTAACGTGTTAAGCCAGCTTTGAGCGTTGGCACGCGTTGCGTACGCGACCACTAGCACACCCAGCAGTACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGATTTCTAGACGGTAGCCCAGTTGTTGGGAAAAATTGGGCCAACTTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACACTAAACTGCTCCAGTCAACCACTACCGG]
consensusID : consensus_9619#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 417 fasta sequence
[CCTGGGAGTTCACAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACATTGCACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTGCTGCCGCTTCGGAATCCCAATCCCCTTCAAATCCCAGCCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGGATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGTTTGTATGTGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTTACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGCGG]
[-] EMBL BM599500 [CCTGGGAGTTCACAAGCAGTGACTAGTTTTATTGAGCTGTACAACTATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACATTGCACTACATAAATAACCGAAGTACTCCTACGACGCGACGTCAGTGCTGCCGCTTCGGAATCCCAATCCCCTTCAAATCCCAGCCTGGAAATGGGAGTGAGAAGGGGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCGACCGATAAGCGGATTGGCTTATGGCGGTAAATATCACCGTGTGTTGTAGCTAGAATAAATTACGTTTGTATGTGTGTGCTGAAATTCGACTGTTTGCGAGTGGTTTTGTTGTTCAGCTTACAGACTTCCCTGCAGCAGATGACCCACTGCTGGTGTGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9619#0 ------------------------------------------------------------
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 GTACGTCCCCTTTCCATTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGGAAGGCAA 60
consensus_9619#0 ------------------------------------------------------------
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 CCCGGGCATAAACATCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGC 120
consensus_9619#0 ------------------------------------------------------------
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 CGGTGTATCGTAGTGGTAGAGATCACCGTTCGGATCCACTCTCTTGGGCTCTCGCACGAT 180
consensus_9619#0 ------------------------------------------------------------
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 CAACGCTCCATAATGCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGT 240
consensus_9619#0 ------------------------------------------------------------
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 GCCCGGTTCCGTTGCTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTG 300
consensus_9619#0 ------------------------------------------------------------
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 GGTAATGAACGGGACGCCGTCCATGTAGGGCGTTGCTCGCTGATGCAGCCCGTGCCAGTG 360
consensus_9619#0 ------------------------------------------------------------
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 AATGGCGGCCGATGTGCCCGCCATCGCATTCGTTATGTCGACCACGATCAGATCGTGCCG 420
consensus_9619#0 ------------ACGTTTTCCTGGGAGTTCACAAG-CAG-----TGACTAGTTTTATTGA 42
consensus_9619#2 -------------------CCTGGGAGTTCACAAG-CAG-----TGACTAGTTTTATTGA 35
consensus_9619#1 GCAGACGCTAATCGTTGGGCCGGGAATTTTGCGATTCAGGCTCATGACGCCCCGTTCCAC 480
** ** * ** * * *** **** *
consensus_9619#0 GCTGTACAAC--TATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACA-T 99
consensus_9619#2 GCTGTACAAC--TATTTTAACAAGTATCTAACAGTATCCTATAAATCCGTTGCTTACA-T 92
consensus_9619#1 ACCGTCCGCCGTTATGCAGGCCGGATGGTAGCAGT-CCGTATGGTTGCCTTTCGCACAGT 539
* ** * * *** * * ** **** * *** * * ** * *** *
consensus_9619#0 TGCACTACATAAATAAC----CGAAGTACTCCTACGACGC--------GACGTCAGTACT 147
consensus_9619#2 TGCACTACATAAATAAC----CGAAGTACTCCTACGACGC--------GACGTCAGTGCT 140
consensus_9619#1 CCCGGCAGGCAGGTCCCATCACGTGGTAGTGTTCCATCGTCCAGGAAAAGTGGCATATCC 599
* * * * * ** *** * * * ** * ** *
consensus_9619#0 GCCGCTTCGGAATCCCAATCCCCTTCAAATCCCA---ACCTGGAAATGGGAGTGAGAAGG 204
consensus_9619#2 GCCGCTTCGGAATCCCAATCCCCTTCAAATCCCA---GCCTGGAAATGGGAGTGAGAAGG 197
consensus_9619#1 GTGGCTGGGTATTGTCGCACTCGCGCAAACACTGCTCGCCCGGAAATGTGCTCACATCGA 659
* *** * * * * * * **** * ** ******* * *
consensus_9619#0 GGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCG 264
consensus_9619#2 GGAACGTTCGAGGATGCTTCAAATAATTTATTACACTAGATCAATGCGAGCTGAGAAGCG 257
consensus_9619#1 GCGTCCCGTTCGATTGCT-CGAGTAACGTGTTAAGCCAGCTT--TGAGCGTTGGCACGCG 716
* * * **** * * *** * *** * ** * ** * * ** * ***
consensus_9619#0 ACCGATAAGCGGATTGGCTTATGGCGGTAAATATCACCGTGTGT---TGTAGCTAGAATA 321
consensus_9619#2 ACCGATAAGCGGATTGGCTTATGGCGGTAAATATCACCGTGTGT---TGTAGCTAGAATA 314
consensus_9619#1 TCGCGTACGCGACCACTAGCACACCGAGCAGTACTAGCACGTGTGATCGTAACACGATCA 776
* ** *** * ** * ** * * **** *** * ** *
consensus_9619#0 AATTACGTTTGTATGTGTGTGTTTGTTTGTGGGTGTGCTG-------AAATTCGACTG-- 372
consensus_9619#2 AATTACGTTTGTATGTGTGTG----------------CTG-------AAATTCGACTG-- 349
consensus_9619#1 TCTTTGTTTTGTATGTGGTTTCTAGACGGTAGCCCAGTTGTTGGGAGAAATTGGGCCAAC 836
** ********** * ** ***** * *
consensus_9619#0 ------TTTGCGAGTGGTTTTGTTGT-TCAGCTCACAGACTTCCC----TGCAGCAGATG 421
consensus_9619#2 ------TTTGCGAGTGGTTTTGTTGT-TCAGCTTACAGACTTCCC----TGCAGCAGATG 398
consensus_9619#1 TTAAAACTCGTAACTTTTTTTGTTTTGTTTGCGTGTAAACTTGCTATCGCGCACTAGACA 896
* * * * ******* * * ** * **** * *** ***
consensus_9619#0 ACCCACTGCT--GGTGTGTAGCTGTCGCATTTGGGGAAGTCGGCAGGTGCCTTTACCATC 479
consensus_9619#2 ACCCACTGCT--GGTGTGCGG--------------------------------------- 417
consensus_9619#1 CTAAACTGCTCCAGTCAACCGGGACCGG-------------------------------- 924
****** ** *
consensus_9619#0 TCCGACGTTTCACCGACCTGCAGCACCAGCGCCATACCGACGGCCGTGTGCCACTCGTAA 539
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TGGCAGTGCATCAGCCAGAAGCCTGGGTTGTCCGCACGGAAGCGGACACGTGCGTACCGC 599
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 GGCTCGGAATCGATACGGTGTCCTTGCGCGGTGGAAGCGCCACGGTGTTGCGCGACAGTA 659
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 ACCGCTGCCGGGCTATGTTTTGCGCGATTTCGAGCGTAATCGGTACCCGTCGATCTTGGC 719
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TCATCTCCATCACGAACATCTGGTAGCCGTGCAGGTGGAACGGATGGTTGAGATCGTTCA 779
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CCGAGGGCGTTAGATCGAGAATGTACAGTTCTACGATATCGCCGAGGTTGATCTTTACCC 839
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 GATGGGTGCAGGTGCAGAGCTGTCGATCGGAGCAGGAGTCGGGCCGGTTGTCCTCATCGC 899
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 AGAATGTGTCGTCACGGATTTTCTCCGGCTGGGTGAGCAGTGAGAATGGTGGGTATGCGA 959
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 GGCTGATGTTGTTGATCGCTCCTTGCATCATTACCGAACCGTAGATATTCATATAGTGCT 1019
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CATATCGGTTCGACTCAAACATGCTCTCGAAGCTAACAGGATAGTTGTAGAAACCAAACG 1079
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TTAGCTGATGATCTGGCACTCCGTTGATCACGTCTTCGTCCGTGTCGTACGCTTGAAAGT 1139
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CGGTGATACAATAGTCACCAAACTCTGGGCGTCCACAGGTGGCATTCGGATGGTTCGCTG 1199
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TGGCAACGTTTCGGAACGGTTCCTCGTACGTAGGTGGAGCACGAGTTGGGAAGGCATCGT 1259
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TAATAAACGGCCCAGTGGTGTATCTCAGCACGGCAAACTGCTCCAACTGCAAGTCCGCGC 1319
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 AAGGTCCAAGGGAACGCAAACGTACCCAATAAGTGTCTTTAACACCGTTTGCTTCCAGCA 1379
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CGAAATCGTACCGCTCGCCAGACGTCGACACGAGCGTGTCAACTTTGCGTGGCTGCAGAT 1439
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 GGAAGGAATCGCTCGCAATCACTTCCATCATGTGATCTTCAATCTGGAGCTGCAGCGGAC 1499
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 ACACGTGGCTTGCCGCATTGATAAACCGGAACCGGAATCGTGCCCCACGCCGTACCGTAT 1559
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 ACACCTCCAACGGCGTTTGGGTAGTTTCATTCTTCTTCGGATCGTGGTACGTCCCCTTTC 1619
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CGTTGATCAGCAGATTGATCGGCATAATTCCGCCGGCGGAAGGCAACCCGGGCATAAACA 1679
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TCTCCCCATCGATGTGCATCCAATCTGAGCCGAGAATTACGTGTGCCGGTGTATCGTAGT 1739
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 GGTAGAGATCACCGTTCGGATCCACTCTCTTAGGCTCTCGCACGATCAACGCTCCATAAT 1799
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 GCCCGTTCACCTTATGGTGGCCCGAGTGGGAATGGTAAAACTGTGTGCCCGGTTCCGTTG 1859
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CTAGGAAGGCGTAGCGAAACGTGTTGCCAAATCCGATCGGACACTGGGTAATGAACGGGA 1919
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CGCCGTCCATGTAGGGAGTCGCTCGCTGATGCAGCCCGTGCCAGTGAATGGCCGGATGGT 1979
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 AGCAGTCCGTATGGTTGCGCTTTCGCACAGTCCCGGCAGGCAGGTCCCATCACGTGGTAG 2039
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TGCTCCATCGTCCAGGAAAAGTGGCATATCCGTGGCTGGGTATTGTTGCACTCGCGTAAA 2099
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CACTGCTCGCCCGGAAATGTGGTCACATCGAGCGTCCCGTTCGATTGCTCGAGTAACGTG 2159
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TTAAGCCAGCTTTGAGCGTTGGCACGGCGCGCGTACGCGACCACTAGCACACCGAGCAGT 2219
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 ACTAGCACGTGTGATCGTAACACGATCATCTTTGTTTTGTATGTGATTTCTAGACGGTAG 2279
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 CCCAGTTGTTGGGAGAAATTGGGCCAACTTAAAACTCGTAACCTTTTTTTTGTTTGCGCG 2339
consensus_9619#2 ------------------------------------------------------------
consensus_9619#1 ------------------------------------------------------------
consensus_9619#0 TAAACTTGTCATCGCGCACTAGAC 2363
consensus_9619#2 ------------------------
consensus_9619#1 ------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||