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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2016 fasta sequence
[TTTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGCGCTTGTTGGTCGGACTTGTTTTAGTCTGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACACGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGGTGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC-GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGTTTGGTATCGTTTACGAAACCGCGCCAGGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGCGTCTAGTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCATTGCTGCCAACGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGCTCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGACGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACACTGCGTAAGCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATATTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA-CCGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGCTACGTCCTATACGGGTTGCTGTCGTACGGGCCGAAAAGCTGCTCCGTGCTCTATCCAGACGTGTACACCAATGTGGCCAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATAAATAGAGTGTTATAAAAAA]
[+] EMBL CNS08KLX [TTTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGCGCTTGTTGGTCGGACTTGTTTTAGTCTGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACATGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGATGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGGGGTTTGGTATCGTTTACGAAACCGCGCCAGGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGG ]
[+] EMBL BM625484 [ ccgGGACTTGTTTTAGTCTGGGGATTCCCGTG GCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACACGATGGGTCGCGTACGGTACTACACACTCACGTTGGTTTCGGTGTGCCTTTTGCTGCTGACAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAGCCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTCGGGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACC ]
[+] EMBL BX623486 [ GTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACACGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGGTGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCAAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTACGTTCAGCCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCA ]
[+] EMBL BM581377 [ ccGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGGTGTGCCTTTTGCTGCTGGAAGCTTCCTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCAGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACGCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCC ]
[+] EMBL BM582986 [ ccgGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAGCCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTTCCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACGCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGTACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGTTTGGTATCGTTTACGAAACCGCGCCAAGATACGACAATATGCGACACCAAGGAGTACACGGTGGTT ]
[+] EMBL BX621770 [ GCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCAAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGCTCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACGCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGTTTGGTATCGTTTACGAAACCGCGCCAGGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGGNGGATCGAGCAGTACCTCCGTGCGTCTAGTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCA ]
[+] EMBL BX606977 [ GTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCG ]
[+] EMBL BX609257 [ CAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGGAGTTTGGTATCGTTTACGAAACCGCGC ]
[+] EMBL AGA281914 [ CTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAG ]
[+] EMBL BM642259 [ ccgcccacgCGTCCGCACCCTC GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACGCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGTTTGGTATCGTTTACGAAACCGCGCCAGGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGCGTCTAGTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCATTGCTGCCAACGTCCACGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCA ]
[+] EMBL BX605252 [ GGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGC ]
[+] EMBL BX625610 [ ACGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGCGTCTAGTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCATTGCTGCCAACGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGCTCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGACGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACACTGCGTAAGCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATATTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA CCGCTGCAGCTTCTGCAGCCAGTGAACGGNCAGCAGCGCTACGTC ]
[+] EMBL BX626628 [ ACCAACCATAATAAGCTCGCATTGCTGCCAACGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGCTCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGACGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACACTGCGTAAGCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATATTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA CCGCTGCAGCTTCTGCAGCCAGTGAACGGGCAGCAGCGCTACGTC ]
[-] EMBL CNS08KLY [ ACCATAATAAGCTCGCATTGCTGCCAACGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGCTCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGACGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACA TGCGTAAGCAGCATACCGAAACGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAAC CGCTACGCGAACGATATTGCACTGATCCGG TGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAG TGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCACCCGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGCTACGTCCTATACGGGTTGCTGTCGTACGGGCCGAAAAGCTGCTCCGTGCTCTATCCAGACGTGTACACCAATGTGGCCAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATAAATAG ]
[+] EMBL AL694307 [ cccangattAGACGATCTGTCAGGCGACACTGA TA CGATCTCTATCTAATTAGTGCTGCACACTGCGTAAGCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATATTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA CCGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGCTACGTCCTATACGGGTTGCTGTCGTACGGGCCGAAAAGCTGCTCCGTGCTCTATC ]
[-] EMBL AGA280219 [ GTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA CCGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGNTACGTCCTATACGGGTTGCTGTCGTACGGGCCGAAAAGCTGCTCCGTGCTCTATCCAGACGTGTACACCAATGTGGCCAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATCTATGGAGTGTTATAAAAAA]
consensusID : consensus_9635#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 990 fasta sequence
[GTCGCGTCGCTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGCGCTTGTTGGTCGGACTTGTTTTAGTCTGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACATGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGATGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTT-TGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTCGGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATCTATGGAGTGTTATAAAAAAAAAAAA]
[+] EMBL CNS09IQB [GTCGCGTCGCTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGCGCTTGTTGGTCGGACTTGTTTTAGTCTGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACATGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGATGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTT TGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTCGGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATCTATGGAGTGTTATAAAAAAAAAAAA]
[-] EMBL CNS09IQC [ GCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACATGATGGGTCGCGTACGGTACTACGAACTCACGTTGGTTTCGATGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACT TTTCACAAAAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTTTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGAATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGAAATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTGTGGAACCGGGGCGATGATCAGAGCTCC ]
consensusID : consensus_9635#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 821 fasta sequence
[TCGAGCAGAATCCCGAGGTTAACTAGAGCGCTTGCTCCCGTACGCGTACGACGTGCGCTATGTATGGTCGGACTTGTATTTAGTCTNGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTACATATTACTTAGCTATATTAGTGCCGGAGAGGGGCCACAAGATTATCAGTGTCTACACATGATGGGTACGCGTACGGTACTACGCACTCACGTATGGTTAACGATAGTGCCTATTATGCTGCTGGCAGCTATCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTCAACCTTCTGATTACAAATGGCTTACAGCTCAANGCGCAGGGCGACCTGGCCATGGCACTGTGGCACCTGTANATCACAAAAACAAATACCGCACCGATACCGATNACGGAANCTNACTTGACACGATAGCCGCGANNGGAATACCCAATATACTACGATTCAAACAAATAACGNACTANACANTAAACCGAGACCGACGACATCCAATAGCCTGCTGGCTATGGANTCCCACACACATGGAGGAACATNTCTAAACACTTCGCAGGCACCACACAACGAACAGGNAACGGGCCCGGANAACTAATACCTNAAGGGGCTTACGCCCCCANGCAGGTAGGAGNGCAAAACACAGACCCAACTGCANCACCAGGAGNACATTACCACCACGCGCACACAGACTTAGACGNACCAAAAAGGGCCCACTTATACACCAACACCGCGACCACCCCCCGGAANCANACGANCCCCCCAACTNAGAGCACACACNGCACACCATAAAACCGCAACAACCCTGCN]
[+] EMBL AL694649 [TCGAGCAGAATCCCGAGGTTAACTAGAGCGCTTGCTCCCGTACGCGTACGACGTGCGCTATGTATGGTCGGACTTGTATTTAGTCTNGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTACATATTACTTAGCTATATTAGTGCCGGAGAGGGGCCACAAGATTATCAGTGTCTACACATGATGGGTACGCGTACGGTACTACGCACTCACGTATGGTTAACGATAGTGCCTATTATGCTGCTGGCAGCTATCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTCAACCTTCTGATTACAAATGGCTTACAGCTCAANGCGCAGGGCGACCTGGCCATGGCACTGTGGCACCTGTANATCACAAAAACAAATACCGCACCGATACCGATNACGGAANCTNACTTGACACGATAGCCGCGANNGGAATACCCAATATACTACGATTCAAACAAATAACGNACTANACANTAAACCGAGACCGACGACATCCAATAGCCTGCTGGCTATGGANTCCCACACACATGGAGGAACATNTCTAAACACTTCGCAGGCACCACACAACGAACAGGNAACGGGCCCGGANAACTAATACCTNAAGGGGCTTACGCCCCCANGCAGGTAGGAGNGCAAAACACAGACCCAACTGCANCACCAGGAGNACATTACCACCACGCGCACACAGACTTAGACGNACCAAAAAGGGCCCACTTATACACCAACACCGCGACCACCCCCCGGAANCANACGANCCCCCCAACTNAGAGCACACACNGCACACCATAAAACCGCAACAACCCTGCN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9635#0 --------TTTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGC 52
consensus_9635#1 GTCGCGTCGCTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGC 60
consensus_9635#2 ----TCGAGCAGAATCCCGAGGTTAACTAGAGCGCTTGCTCCCGTACGCGTACGACGTGC 56
* ** * ** *****************************
consensus_9635#0 GCT-TGT-TGGTCGGACTTGT-TTTAGTCTGGGG-ATTCCCGTGGCAGCAGGGAGTTTCC 108
consensus_9635#1 GCT-TGT-TGGTCGGACTTGT-TTTAGTCTGGGG-ATTCCCGTGGCAGCAGGGAGTTTCC 116
consensus_9635#2 GCTATGTATGGTCGGACTTGTATTTAGTCTNGGGGATTCCCGTGGCAGCAGGGAGTTTCC 116
*** *** ************* ******** *** *************************
consensus_9635#0 GTGTGTGGTGGAGGCATT---CATTTCTTAGCTATTT--GTGCCGGAGAGGGGCCA-AAG 162
consensus_9635#1 GTGTGTGGTGGAGGCATT---CATTTCTTAGCTATTT--GTGCCGGAGAGGGGCCA-AAG 170
consensus_9635#2 GTGTGTGGTGGAGGCATTACATATTACTTAGCTATATTAGTGCCGGAGAGGGGCCACAAG 176
****************** *** ********* * ***************** ***
consensus_9635#0 ATTATCAGTGTCTACACACGATGGGT-CGCGTACGGTACTACGCACTCACGT-TGGTTT- 219
consensus_9635#1 ATTATCAGTGTCTACACATGATGGGT-CGCGTACGGTACTACGCACTCACGT-TGGTTT- 227
consensus_9635#2 ATTATCAGTGTCTACACATGATGGGTACGCGTACGGTACTACGCACTCACGTATGGTTAA 236
****************** ******* ************************* *****
consensus_9635#0 CGGT-GTGCCTTTT--GCTGCTGGCAGCT-TCTTCCCAAGCCCAAAACTGTGGCAAACGT 275
consensus_9635#1 CGAT-GTGCCTTTT--GCTGCTGGCAGCT-TCTTCCCAAGCCCAAAACTGTGGCAAACGT 283
consensus_9635#2 CGATAGTGCCTATTATGCTGCTGGCAGCTATCTTCCCAAGCCCAAAACTGTGGCAAACGT 296
** * ****** ** ************* ******************************
consensus_9635#0 AAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGG---AGGGCGAC-TGGCC 331
consensus_9635#1 AAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGG---AGGGCGAC-TGGCC 339
consensus_9635#2 AAGCAGGTCAACCTTCTGATTACAAATGGCTTACAGCTCAANGCGCAGGGCGACCTGGCC 356
******** ************************ ** ** * ******** *****
consensus_9635#0 ATGGCA-TGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGAT 390
consensus_9635#1 ATGGCA-TGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGAT 398
consensus_9635#2 ATGGCACTGTGGCACCTGTANATCACAAAAACAAATACCGCACCGATACCGATNACGGAA 416
****** ******** * * **** * ** * ** * ***
consensus_9635#0 CCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGAT 450
consensus_9635#1 CCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGAT 458
consensus_9635#2 NCTNACTTGACACGATAGCCGCGANNGGAATACCCAATATACTACGAT--TCAAACAAAT 474
* ** ** * * * * ** * * ** ** **
consensus_9635#0 TAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCA 510
consensus_9635#1 TAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCA 518
consensus_9635#2 AACGNACTANACANTAAA--CCGAGACCGACGACATCCAATAGCCTGCTGGCTATGGANT 532
* * * * * * * * * * * * ** * ** * * *
consensus_9635#0 TTCACGCCCG-AGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAAT 569
consensus_9635#1 TTCACGCCCG-AGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAAT 577
consensus_9635#2 CCCACACACATGGAGGAACATNTCTAAACACTTCGCAGGCACCACACAACGAACAGGNAA 592
*** * * ** * * *** *** * ** * * *** *
consensus_9635#0 CAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTC 629
consensus_9635#1 CAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTC 637
consensus_9635#2 CGGGCCCGGANAACTAATAC-CTNAAGGGGCTTACGCCC--CCANGCAGGTAGGAGNGCA 649
* ** ** * ** * **** ** ** * * * **
consensus_9635#0 GTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC 689
consensus_9635#1 GTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC 697
consensus_9635#2 AAACA-CAGACCCAACTGCANCACCAGGAGNAC-ATTACCACCACG-CGCACACAGACTT 706
** * ** * ** *** ** * ** * * * ** ** **
consensus_9635#0 GGAACCGT--GATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTG 747
consensus_9635#1 GGAACTGT--GATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTG 755
consensus_9635#2 AGACGNACCAAAAAGGGCCCACTTATA-------CACCAACACCGCGACCACCCCCCG-G 758
** * *** * *** * *** * ** ** ** *
consensus_9635#0 AAGCACGTCTACCCGTCG-TTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTC 806
consensus_9635#1 AAGCACGTCTACCCGTCG-TTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTC 814
consensus_9635#2 AANCANACGANCCCCCCAACTNAGAGCACACACNGCACACCATAAAACCGCAACAACCCT 818
** ** *** * * ** * * * * * ***** *
consensus_9635#0 GCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGC 866
consensus_9635#1 GCCACTCAGCTTAC--CGAGTCGGTCGAGTGCCAAAAGCTATATCG--ACTGGATTCTGG 870
consensus_9635#2 GCN--------------------------------------------------------- 821
**
consensus_9635#0 AACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGT 926
consensus_9635#1 ATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTT 930
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 -TTGGTATCGTTTACGAAACCGCGCCAGGATACGACAA-TATGCGACACCAAGGAGTACA 984
consensus_9635#1 GTCGGTGCGATCTGTG----CGCAATAAATTATTTCATCTATGGAGTGTTATAAAAAAAA 986
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 CGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGCGTCTA 1044
consensus_9635#1 AAAA-------------------------------------------------------- 990
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 GTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCATTGCTGCCAA 1104
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 CGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGC 1164
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 TCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGA 1224
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 CGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACACTGCGTAA 1284
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 GCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACT 1344
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 CTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCAC 1404
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 TAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATA 1464
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 TTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCT 1524
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 GCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGT 1584
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 GGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGG 1644
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 TCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGA 1704
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 TCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCAC 1764
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 CGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGCTACGTCCTATACGGGTTGCTGT 1824
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 CGTACGGGCCGAAAAGCTGCTCCGTGCTCTATCCAGACGTGTACACCAATGTGGCCAGCT 1884
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 ATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACA 1944
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 CTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATAAATAGAG 2004
consensus_9635#1 ------------------------------------------------------------
consensus_9635#2 ------------------------------------------------------------
consensus_9635#0 TGTTATAAAAAA 2016
consensus_9635#1 ------------
consensus_9635#2 ------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||