These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9647#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1211 fasta sequence [CCGGCCAGTGAACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG-TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA-G-CG-AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC-AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC-AAAC-G-ATGCTCCGCTTCATCGTCACTTCCGAACAT-C-CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA-AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC-CACTG-GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCTAGATTTA] [+] EMBL BM642119 [CCGGCCAGTGAACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATG ] [+] EMBL CNS09Q38 [ AGTGAAC GTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGAC ] [+] EMBL CNS08OGC [ aAACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGGCTGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGA ] [+] EMBL CNS08DW6 [ ACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAACGCCGCAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTTTTTCATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAT AAGTATTTCTGT ] [+] EMBL CNS08I8Z [ GTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGACACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGCACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCAT ] [+] EMBL CNS09KMF [ TCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGC ] [+] EMBL CNS08NWK [ CTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACAACGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAA ] [+] EMBL CNS08NEY [ CTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGCTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGCTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCACTGC ] [+] EMBL BM618347 [ ccGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAAGGTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGC ] [+] EMBL BM578335 [ ccgAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAA G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACACAAAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAACAGCATTGGTTGCTGTG ] [+] EMBL BX620241 [ TTGG TGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAN G CG AACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTTGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATGCTCCGCTTCATCGTCACTTCCGAACATCC CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACT ] [-] EMBL CNS08DW7 [ CGAGCCCGGGTTCGATAAGTGGATCGCTATATTGGAAGTGTACGAGTACTAAATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAAAACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC GAATG TCCGCTTCATCGTAACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC AACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGAAAAAATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTAACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGGTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCTAGA ] [-] EMBL CNS08NEZ [ CTATATTGGAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGAACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGCTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAACGG ATG TCCGCTTCATCGTAACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACA CGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCTGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCT ] [-] EMBL CNS08NWL [ GAAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAAAACTCGTCTGCACTGTACCTGTTCATCGGCACAC AAGTATTTCTGTTCGTTCTGACCGTGATTGGTTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTC AAAC G ATG TCCGCTTCATCGTCACTTCCGAACAT C CGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGAAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCTAGATTTA] [-] EMBL CNS09KMG [ CTGATTCGTCAAAACGG ATG TCCGCTTCATCGTCACTTCCGAACATGCGCGCATTCATCTGCCGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGCACACTGAGAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTAGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTGGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTAAACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCT ] [-] EMBL CNS08OGD [ CGCACTAAAGCTGATCCAAGAA AGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGCGTCAACCCTTGC CACTG GAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGAAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTAAACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATTTATAATAAATAAAGGCTAGA ] [-] EMBL CNS09Q39 [ CTG GGGTGTCGTGACA CGTTACCGGCAATGCGTTCTTCAATGGATGCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAG ] [-] EMBL CNS08I90 [ GGTTCCTGGAAGATAAGCCCATCTGGGCCGCCATCATGGCTATGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGCTAAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCGCATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGCATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAGATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAGATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAAATAAAGGCTAGATTTA] consensusID : consensus_9647#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 659 fasta sequence [CAGAATCGCCCCGAGGGTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGGTGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAAGCGAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTATGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGACAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACACAAGTATTTCTGTATCGTTCTGACCGTGATTGGTNTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTCAAACGATGCTCCGCTTCATCGATCACTTCCGAACATCCGCATTCATCTGCCGCACTAAAGCTGAT] [+] EMBL AL931966 [CAGAATCGCCCCGAGGGTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAAACGGTGTAAGCAGTTTTAAGTGTTACGATTGGTGTTGAAATTTTGCAATACTTATTCGAATTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAACAAAGCGAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCGAACCAAATCGCTTGCATCAAGTACACGCTGTTTGTTTCAATATAGTAGCATGGATCGTTGGAGCGGGACTGTTATGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTGGATCGCTATATTGGACAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCGGTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGTCTGCACTGTACCTGTTCATCGGCACACAAGTATTTCTGTATCGTTCTGACCGTGATTGGTNTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTCAAACGATGCTCCGCTTCATCGATCACTTCCGAACATCCGCATTCATCTGCCGCACTAAAGCTGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9647#0 CCGGCCAGTGAACGGTTTAGTTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAA 60 consensus_9647#1 ----CAGAATCGCCCCGAGGGTTCTCACAATCGCAGCGACTTTTGGATTCGGTGTAAGAA 56 * * * *************************************** consensus_9647#0 ACGGTGTAAGCAGTTTTAAGTGTTACGATTGGTGTTGAAATTTTGCAATACTTATTCGAA 120 consensus_9647#1 ACGGTGTAAGCAGTTTTAAGTGTTACGATTGGTGTTGAAATTTTGCAATACTTATTCGAA 116 ************************************************************ consensus_9647#0 TTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAAC 180 consensus_9647#1 TTTCTCATCACTTGAGTGGTGTAGAAGGTGTATCAAACAATCAGTGACATTAGTGAAAAC 176 ************************************************************ consensus_9647#0 AAAGCGAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCG 240 consensus_9647#1 AAAGCGAACACGAAAATGGCTCGCGGTGAAGGCAAAGGTGAAAGTGTTGCCAGGTTGTCG 236 ************************************************************ consensus_9647#0 AACCAAATCGCTTGCATCAAGTACACGCTGTTTTGTTTCAATATAGTAGCATGGATCGTT 300 consensus_9647#1 AACCAAATCGCTTGCATCAAGTACACGCTGTTT-GTTTCAATATAGTAGCATGGATCGTT 295 ********************************* ************************** consensus_9647#0 GGAGCGGGACTGTT-TGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTG 359 consensus_9647#1 GGAGCGGGACTGTTATGCGTTTACCATTTTTATTCGTGCCGAGCCCGGGTTCGATGAGTG 355 ************** ********************************************* consensus_9647#0 GATCGCTATATTGGA-AGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCG 418 consensus_9647#1 GATCGCTATATTGGACAGTGTACGAGTACTACATAGGAGTGTATATACTGATTGGTGCCG 415 *************** ******************************************** consensus_9647#0 GTGCGCTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAACACTCGT 478 consensus_9647#1 GTGCACTGGTTATGATATTTTCCTTCCTTGGCTGCTGCTCAGCACTGATGGAGCACTCGT 475 **** *********************************************** ******* consensus_9647#0 CTGCACTGTACCTGTTCATCGGCACACAAGTATTTCTGT-TCGTTCTGACCGTGATTGGT 537 consensus_9647#1 CTGCACTGTACCTGTTCATCGGCACACAAGTATTTCTGTATCGTTCTGACCGTGATTGGT 535 *************************************** ******************** consensus_9647#0 T-CGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTCA 596 consensus_9647#1 NTCGGCCATTCTGCTTGACTACTCGACCATGAACTCCAGCATCCAGCCGCTGATTCGTCA 595 ********************************************************** consensus_9647#0 AACGATGCTCCGCTTCATCG-TCACTTCCGAACATCCGCATTCATCTGCCGCACTAAAGC 655 consensus_9647#1 AACGATGCTCCGCTTCATCGATCACTTCCGAACATCCGCATTCATCTGCCGCACTAAAGC 655 ******************** *************************************** consensus_9647#0 TGATCCAAGAAAGCATTGGTTGCTGTGGAGCGGACGGACCGAACGACTACATGGTGATGC 715 consensus_9647#1 TGAT-------------------------------------------------------- 659 **** consensus_9647#0 GTCAACCCTTGCCACTGGAGTGTCGTGACACCGTTACCGGCAATGCGTTCTTCAATGGAT 775 consensus_9647#1 ------------------------------------------------------------ consensus_9647#0 GCGTCAACGAGCTGACCTGGTTCCTGGAAGATAAGTCCATCTGGGCCGCCATCATGGCTA 835 consensus_9647#1 ------------------------------------------------------------ consensus_9647#0 TGATACTGGCTGCCGTACATACCTGCAATGCCGTGCTTGGAATCGTGCTGGTGCAAGCGC 895 consensus_9647#1 ------------------------------------------------------------ consensus_9647#0 TCAGACGCGAGGAGGAAGCAATGAACCGACGCTAAATGCAGGATCCAGCAAGTAGAAGCG 955 consensus_9647#1 ------------------------------------------------------------ consensus_9647#0 CATTTACGCGTGACAGCAGTGAAGGAAGCTTACTTACATTCCAAATCCAGAACCAGGAGC 1015 consensus_9647#1 ------------------------------------------------------------ consensus_9647#0 ATAGAGCTATGACACGCTTGCAAGGGAATGAGTTGTTTTAATTAATTCTACAGTATTTAG 1075 consensus_9647#1 ------------------------------------------------------------ consensus_9647#0 ATATCCGAGCTATCTTTGCCATGTTTTACACTTACTTTACATCGTCCATAGGTACTATAG 1135 consensus_9647#1 ------------------------------------------------------------ consensus_9647#0 ATTAATCGAACAATGTCAGCAATGTCACCCAACCGAACACGTTTGGTGTATCTATAATAA 1195 consensus_9647#1 ------------------------------------------------------------ consensus_9647#0 ATAAAGGCTAGATTTA 1211 consensus_9647#1 ---------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||