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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9648#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 915 fasta sequence
[CCGCCCACGCGTCCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC-GGCCGAGTATGTGGACACACTGTACACTT-GGTCCGCATTCAATACGAACGATCTT-GGCGAAGGTTTGGC-GGATGGGCTGAAGGGACTGATCAAGTA-CGTGCCACTGGAGAAGATTCA-CCTGATTGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGTGAATCGCTGAGTGGCATACAGCGGGGTGATGCC]
[+] EMBL BM647100 [CCGCCCACGCGTCCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGT GATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATACGGGCAGAGTATGTGGACACACTGTACACTTGGGTCCGCATTCAATACGAACGATCTT GGCGAAAGTTTGGC GGATGGGCTGAA ]
[+] EMBL BM586567 [ CCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAAC ]
[+] EMBL BM587660 [ CCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGGCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT G ]
[+] EMBL BM608637 [ ccgGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAA ATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGA ]
[+] EMBL BM599122 [ ccgGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT GGCGAAGGT ]
[+] EMBL BM617007 [ ccgGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTTGGGCGAAGG ]
[+] EMBL BX627896 [ GATCTCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACNGTCATTTTGGTGACCGGATG ]
[+] EMBL BM644102 [ ccgCTGAAAGCACGCGTGTGTTCGGCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACG ]
[+] EMBL BX624447 [ TTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGNGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAGAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCNCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT GGCGAAAGTTTGGCGGGATGGGCTGAANGGACTGATCAAGTACCGTGCCNCTGGAGAAGATTCACCCTGATAGGCCAC ]
[+] EMBL BM596564 [ ccgTCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAACATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT GGCGAAGGTTTGGC GGATGGGCTGAAGGGACTGATCAAGTA CGTGCCACTGGAGAAGATTCA CCTGATTGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGTGAATCGCTGAGTGGCATACAGCGGGGTGATGCC]
[+] EMBL BM583747 [ ccgATGAAGTCAACATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATAC GGCCGAGTATGTGGACACACTGTACACTT GGTCCGCATTCAATACGAACGATCTT GGCGAAGGTTTGGC GGATGGGCTGAAGGGACTGATCAAGTA CGTGCCACTGGAGAAGATTCA CCTGATTGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGTGAATCGCTGAGTGGCATACAGCGGGG ]
consensusID : consensus_9648#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 832 fasta sequence
[TCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATCAAGTACGTGCCACTGGAGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGCGAATCGCTGAGTGGCATACAGCGGGGTGATGCCGATTTCGTGGACATTATTCATACCAATGCGAAGGTCCTGGGCAAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCGTCGTTTCCGTCCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGCTGTATGCCGAGACGGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACTCCCTTCTCTCGCTTAACACTGGCGGGTGCGTGAGCAATCCAATTCCACTTGGCTTTGCCTGCCCCAAAACGGCCAAAGGGAACTTTTTCCTAAAGACGAACGATAAATCACCATTCGCAATGGCATCGTAGTGCCAACTAAC--T------GGTCGATATGAGCTTAGTTGGTGAAAGGCGTTATGTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTAATTTGTTATTTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTGAGTTTGAAAAGAAAAAAAAAAAAGGCCACATGTGCCCAGCCGCGGGCTA]
[+] EMBL BX616812 [TCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATCAAGTACGTGCCACTGGAGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGCGAATCGCTGAGTGGCATACAGCGGGGTGATGCCGATTTCGTGGACATTATTCATACCAATGCGAAGGTCCTGGGCAAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCGTCGTTTCCGTCCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGCTGTATGCCGAGACGGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACTCCCTTCTCTCGCTTAACACTGGCGGGTGCGTGAGCAATCCAATTCCACTTGGCTTTGCCTGCCCCAAAACGGCCAAAGGGAACTTTTTCCTAAAGACGAACGATAAATCACCATTCGCAATGGCATCGTAGTGCCAACTAAC T GGTCGATATGAGCTTAGTTGGTGAAAGGCGTTATGTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTAATTTGTTATTTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAAGTAATTGAAATAAATTGA ]
[+] EMBL BX608849 [ CGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGGGCGAATCGCTGAGTGGCATACAGCGGGGTGATGCCGATTTCGTGGACATTATTCATACCAATGCGAAGGTCCTGGGCAAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCGTCGTTTCCGTCCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGCTGTATGCCGAGACGGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACTCCCTTCTCTCGCTTAACACTGGCGGGTGCGTGAGCAATCCAATTCCACTTGGCTTTGCCTGCCCCAAAACGGCCAAAGGGAACTTTTTCCTAAAGACGAACGATAAATTACCATTCGCAATGGCATCGTAGTGCCAACTAAC T GGTCGATATGAGCTTAGTTGGTGAAAGGCGTTATGTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTAATTTGTTATTTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTG ]
[+] EMBL CNS08JHU [ AAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCGTCGTTTCCGTTCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGCTGTATGCCGAGACAGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACTCCCTTCTCTCGCTTAACACTGGCGGGTGCGTGA CAATCCAATTCCACTTGGCTTTG CTGCCCCAAAACGGCCAAAGGAAACTTTTTCCTAAAGACGAACGATAAATCACCATTCGCAATGGCATCGTAGTGCCAACTAACGGTAGCAACGGTCGATATGAGCTTAGTTGGTGAAAGGCGTTATGTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTAATTTGTTGATTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTGAGTTTGAAAAGAAAAAAAAAAAAGGCCACATGTGCCCAGCCGCGGGCTA]
consensusID : consensus_9648#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 771 fasta sequence
[CCGATTTGTTTCGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCATAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGGTTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAAGGCATTGCTGAGAGTATACCGCAGATATTCTCTCCGGAGCAGCTGCTGGAATTTAGTAAGCAATCGATCATTGGTCTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAACATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACACTTGGTCCGCATTCAATACGAACGATCTTGGCGAAGGTTTGGCGGATGGGCTGAAGGGACTGATCAAGTACGTGCCACTGGAGAAGATTCATCTGATAGGTGCTGGGCGA]
[+] EMBL BM596784 [CCGATTTGTTTCGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCGGCATAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGGTTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAAGGCATTGCTGAGAGTATACCGCAGATATTCTCTCCGGAGCAGCTGCTGGAATTTAGTAAGCAATCGATCATTGGTCTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAACATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCGGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATACGG ]
[+] EMBL BM638243 [ ccgGGCTGGTGGAAAACGTGCAAGATGGGCAAGCGGATGATCGTGTCGATCGTACTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCAATATAACGGACATGAACTACATACTGATGACGGAAGACAACAACGTTACCATACCGTTGCTGGAATCCGACGATCTGTGGAAGAACGAACTGTTCAACAAATCATACGATACGGTCATTTTGGTGACCGGATGGACGTCGAACGTGAACGAGCCGAATCGGGCAATCGATACGATCTACAACGCGTATAAGGCACGTGGCGGGTACAACTTTGTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACACTTGGTCCGCATTCAATACGAACGATCTTGGCGAAGGTTTGGCGGATGGGCTGAAGGGACTGATCAAGTACGTGCCACTGGAGAAGATTCATCTGATAGGTGCTGGGCGA]
consensusID : consensus_9648#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 704 fasta sequence
[GAGGCCAGAATCCGCGCACGAGTGTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAGAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAAGTCAATATAACGGACATGAACTTACATACTGATGACGGAAAGACAAACAACGTTTACCATACCGTTTGCTGGGAAATCGGACGATCTGTTGGAAAGAACGAACTTGTTCAAAGCGAGAGATCATACGGATACGGTCATTTTGGTGACCGGGATGGACGTCGAACGTGACGAGCCGAATCGGGCAATCGATACGATCTACGAACGCGTATAAGGCACGTGGCGGGGTACAACTTTTGTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACACTTGGGTCCGCNATTCAATACGAAGCGATCTTGGCGGAAGGTNTGGGCGGATGGGCTGAAGGGACTGATCAAGTACGTGGCCACTGGAGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACAACATCGTTAGGCAGTGCTTG]
[+] EMBL BX468771 [GAGGCCAGAATCCGCGCACGAGTGTGATCGGATGCTTTTGCGCTCTGGAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAGAAGACGGGAGACGTCGCAAAGGTGGCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAGCTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACGATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAAGTCAATATAACGGACATGAACTTACATACTGATGACGGAAAGACAAACAACGTTTACCATACCGTTTGCTGGGAAATCGGACGATCTGTTGGAAAGAACGAACTTGTTCAAAGCGAGAGATCATACGGATACGGTCATTTTGGTGACCGGGATGGACGTCGAACGTGACGAGCCGAATCGGGCAATCGATACGATCTACGAACGCGTATAAGGCACGTGGCGGGGTACAACTTTTGTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACACTTGGGTCCGCNATTCAATACGAAGCGATCTTGGCGGAAGGTNTGGGCGGATGGGCTGAAGGGACTGATCAAGTACGTGGCCACTGGAGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACAACATCGTTAGGCAGTGCTTG]
consensusID : consensus_9648#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[CTTAGGCTTACATTCACGCTAATCAAACACATTTTACATTTCTGTACAACGTTTCAACAATCAACAAATTACATTCCACAACTTCCTAGACAGCCTCAAAACAAACAACATAACGCCTTTCACCAACTAAGCTCATATCGACCGTTGCTACCGTTAGTTGGCACTACGATGCCATTGCGAATGGTGATTTATCGTTCGTCTTTAGGAAAAAGTTTCCTTTGGCCGTTTTGGGGCAGGCAAAGCCAAGTGGAATTGGATTGCTCACGCACCCGCCAGTTTTAAGCGAGAAAAGGGAGTGGCACTTCACCGCCAACAGGCTCTTTTCCGTTTCGGGATACACTGTCTCGGCATACAGCTCCCAGGCACGCTTATGAGAACATGCCGGATCTAGACATCCCGGTTGAACGGAAACGACGCCGTTGGGATAAAAATCTGCATCTCCGATTGGATCACGCTTGCCCAGCACCTTCGCATTGGCCAGTAGGCCAACAGTGCTCGAGGAAT]
[+] EMBL CNS08JHV [CTTAGGCTTACATTCACGCTAATCAAACACATTTTACATTTCTGTACAACGTTTCAACAATCAACAAATTACATTCCACAACTTCCTAGACAGCCTCAAAACAAACAACATAACGCCTTTCACCAACTAAGCTCATATCGACCGTTGCTACCGTTAGTTGGCACTACGATGCCATTGCGAATGGTGATTTATCGTTCGTCTTTAGGAAAAAGTTTCCTTTGGCCGTTTTGGGGCAGGCAAAGCCAAGTGGAATTGGATTGCTCACGCACCCGCCAGTTTTAAGCGAGAAAAGGGAGTGGCACTTCACCGCCAACAGGCTCTTTTCCGTTTCGGGATACACTGTCTCGGCATACAGCTCCCAGGCACGCTTATGAGAACATGCCGGATCTAGACATCCCGGTTGAACGGAAACGACGCCGTTGGGATAAAAATCTGCATCTCCGATTGGATCACGCTTGCCCAGCACCTTCGCATTGGCCAGTAGGCCAACAGTGCTCGAGGAAT]
consensusID : consensus_9648#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 120 fasta sequence
[CCGCGGACGCGTGGGGTTGTGGAATGTAATTTGTTGATTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTGAGTTTG]
[+] EMBL BM654243 [CCGCGGACGCGTGGGGTTGTGGAATGTAATTTGTTGATTGTTGAAACGTTGAACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTAATTGAAATAAATTGAGTTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9648#1 TCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAGTCA 60
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 ------CCGCCCACGCGTCCGGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCG 54
consensus_9648#2 ---------CCGATTTGTTTCGTCGAGTGAAGCTGATCTCTGAAAGCACGCGTGTGTTCG 51
consensus_9648#3 ------------------------------------------------------------
consensus_9648#4 ------------------------------------------------------------
consensus_9648#1 ATATAACGGACATGAACTACATACTGATCAAGTACGTGCCACTGGAGAAGATTCACCTGA 120
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 GCGTAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGC 114
consensus_9648#2 GCATAAAGTGTCTGTCTGTTACAGTTACTGTGTGTGTGTGCTGGCTGGTGGAAAACGTGC 111
consensus_9648#3 ------------------------------------------------------------
consensus_9648#4 ------------------------------------------------------------
consensus_9648#1 TAGGCCACAGCTTGGGCGCACACATCGTTGGAGGTGCTGGGCGATACTTTCAGTATAAAA 180
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 AAGATGGGCAAGCGGATGATCGTGT---CGATCGTACTGATCGGATGCTTTTGCGCTCTG 171
consensus_9648#2 AAGATGGGCAAGCGGATGATCGTGT---CGATCGTACTGATCGGATGCTTTTGCGCTCTG 168
consensus_9648#3 --------GAGGCCAGAATCCGCGCA--CGAGTGT---GATCGGATGCTTTTGCGCTCTG 47
consensus_9648#4 ------------------------------------------------------------
consensus_9648#1 CGAACAAATCGATACCACGTATCACCGGTCTTGATCCGGCCAATCCATGCTTCAATGAGG 240
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 GAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAAAAGACGGGAGACGTCGCAAAGGTG 231
consensus_9648#2 GAAGTGCACCCCTTTGACTTCGGTGGGTTGGTGAAAAAGACGGGAGACGTCGCAAAGGTG 228
consensus_9648#3 GAAGTGCACCCCTTTGACTTCGGTGGATTGGTGAAGAAGACGGGAGACGTCGCAAAGGTG 107
consensus_9648#4 ------------------------------------------------------------
consensus_9648#1 GCGAATCGCTGAGTGGCATACAGCGGGGTGATGCCGATTTCGTGGACATTATTCATACCA 300
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 GCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAG 291
consensus_9648#2 GCAGCCAAAACGGCGAAAGGCATTGCTGAGAGTATACCGCAGATATTCTCTCCGGAGCAG 288
consensus_9648#3 GCAGCCAAAACGGCGAAGGGCATTGCTGAGAGTATACCGCAAATATTCTCTCCGGAGCAG 167
consensus_9648#4 ------------------------------------------------------------
consensus_9648#1 ATGCGAAGGTCCTGGGCAAGCGTGATCCAATCGGAGATGCAGATTTTTATCCCAACGGCG 360
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 CTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACG 351
consensus_9648#2 CTGCTGGAATTTAGTAAGCAATCGATCATTGGTCTACCGGCGGAAGCGATCGCTGCAACG 348
consensus_9648#3 CTACTGGAATTTAGTAAGCAATCGATCATTGGCTTACCGGCGGAAGCGATCGCTGCAACG 227
consensus_9648#4 ---CTTAGGCTTACATTCACGCTAATCAAACACATTTTACATTTCTGTA---CAACGTTT 54
consensus_9648#1 TCGTTTCCGTCCAACCGGGATGTCTAGATCCGGCATGTTCTCATAAGCGTGCCTGGGAGC 420
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 ATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAA-GT 410
consensus_9648#2 ATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAA-GT 407
consensus_9648#3 ATCAATCAAATATGTTCGGTGGCACTACTCTCCAATGCAACTGCGTCCGAGAATGAAAGT 287
consensus_9648#4 CAACAATCAACAAATTACATTCCACAACTTCCTAGACAGCCTCAAAACAAACAACATAAC 114
consensus_9648#1 TGTATGCCGAGACGGTGTATCCCGAAACGGAAAAGAGCCTGTTGGCGGTGAAGTGCAACT 480
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 CA-ATATAACGGACATGAACT-ACATACTGATGACGGAA-GACAA-CAACGTT-ACCATA 465
consensus_9648#2 CA-ACATAACGGACATGAACT-ACATACTGATGACGGAA-GACAA-CAACGTT-ACCATA 462
consensus_9648#3 CA-ATATAACGGACATGAACTTACATACTGATGACGGAAAGACAAACAACGTTTACCATA 346
consensus_9648#4 GCCTTTCACCAACTAAGCTCATATCGACCGTTGCTACC--GTTAGTTGGCACT-ACGATG 171
consensus_9648#1 CCCTTCTCTCGCTTAACACTGGCGGGTGCGTGAGCAATCCAATTCCACTTGGCTTTGCCT 540
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 CCGTT-GCTGG-----AATCCGACGATCTGT--GGAAGAACGAACT-GTTCAAC-----A 511
consensus_9648#2 CCGTT-GCTGG-----AATCGGACGATCTGT--GGAAGAACGAACT-GTTCAAC-----A 508
consensus_9648#3 CCGTTTGCTGGG---AAATCGGACGATCTGTTGGAAAGAACGAACTTGTTCAAAGCGAGA 403
consensus_9648#4 CCATT-GCGAATGGTGATTTATCGTTCGTCTTTAGGAAAAAGTTTCCTTTGGCCGTTTTG 230
consensus_9648#1 GCCCCAAAACGGCCAAAGGGAACTT--TTTCCTAAAGACGAACGATAAATCACCATTCGC 598
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 AATCATACG-ATACGGTCATTTTGG--TGACCGG-ATGGACGTCGAACGTGAACGAGCCG 567
consensus_9648#2 AATCATACG-ATACGGTCATTTTGG--TGACCGG-ATGGACGTCGAACGTGAACGAGCCG 564
consensus_9648#3 GATCATACGGATACGGTCATTTTGG--TGACCGGGATGGACGTCGAACGTGA-CGAGCCG 460
consensus_9648#4 GGGCAGGCAAAGCCAAGTGGAATTGGATTGCTCACGCACCCGCCAGTTTTAAGCGAGAAA 290
consensus_9648#1 AATGGCATCGTAGTGCCAACTAACTGGTCGATATGAGCTTAGTTGGTGA-AAGGCGTTAT 657
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 AATCGGGCAATCGATACGATCTAC-AACGCGTATAAGGCACGTGGCGGG-TACAACTTT- 624
consensus_9648#2 AATCGGGCAATCGATACGATCTAC-AACGCGTATAAGGCACGTGGCGGG-TACAACTTT- 621
consensus_9648#3 AATCGGGCAATCGATACGATCTACGAACGCGTATAAGGCACGTGGCGGGGTACAACTTTT 520
consensus_9648#4 AGGGAGTGGCACTTCACCGCCAACAGGCTCTTTTCCGTTTCGGGATACACTGTCTCGGCA 350
consensus_9648#1 GTTGTTTGTTTTGAGGCTGTCTAGGAAGTTGTGGAATGTA-ATTTGTTATTTGTTGAAAC 716
consensus_9648#5 ----------CCGCGGACGCGTGGG--GTTGTGGAATGTA-ATTTGTTGATTGTTGAAAC 47
consensus_9648#0 GTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACA-CTTGG-TCCGCA-TTCAAT 681
consensus_9648#2 GTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACA-CTTGG-TCCGCA-TTCAAT 678
consensus_9648#3 GTCGTTATCGATACGGCCGAGTATGTGGACACACTGTACA-CTTGGGTCCGCNATTCAAT 579
consensus_9648#4 TACAGCTCCCAGGCACGCTTATGAGAACATGCCGGATCTAGACATCCCGGTTGAACGGAA 410
* * * * *
consensus_9648#1 GTTGA---ACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTA---- 769
consensus_9648#5 GTTGA---ACAGAAATGTAAAATGTGTTTGATTAGCGTGAATGTAAGCCTAAGGTA---- 100
consensus_9648#0 ACGAA-CGATCTTGGCG-AAGGTTTGG-CGGATGGGCTGAAGGGACTGATCAAGTACGTG 738
consensus_9648#2 ACGAA-CGATCTTGGCG-AAGGTTTGG-CGGATGGGCTGAAGGGACTGATCAAGTACGTG 735
consensus_9648#3 ACGAAGCGATCTTGGCGGAAGGTNTGGGCGGATGGGCTGAAGGGACTGATCAAGTACGTG 639
consensus_9648#4 ACGACGCCGTTGGGATA-AAAATCTGCATCTCCGATTGGATCACGCTTGCCCAGCACCTT 469
** * ** ** * *
consensus_9648#1 ---ATTGA--AATAAATTGAGTTTGAAAAGAAAAAAAAAAAAGGCCACATGTGCCCAGCC 824
consensus_9648#5 ---ATTGA--AATAAATTGAGTTTG----------------------------------- 120
consensus_9648#0 -CCACTGG--AGAAGATTCACCTGATTGGCCACAGCTTGGGCGCACA-CATCGTTGGA-G 793
consensus_9648#2 -CCACTGG--AGAAGATTCATCTGATAGGTG-----CTGGGCGA---------------- 771
consensus_9648#3 GCCACTGG--AGAAGATTCACCTGATAGGCCACAGCTTGGGCGCACAACATCGTTAGGCA 697
consensus_9648#4 CGCATTGGCCAGTAGGCCAACAGTGCTCGAGGAAT------------------------- 504
* ** * * *
consensus_9648#1 GCGGGCTA---------------------------------------------------- 832
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 GTGCTGGGCGATACTTTCAGTATAAAACGAACAAATCGATACCACGTATCACCGGTCTTG 853
consensus_9648#2 ------------------------------------------------------------
consensus_9648#3 GTGCTTG----------------------------------------------------- 704
consensus_9648#4 ------------------------------------------------------------
consensus_9648#1 ------------------------------------------------------------
consensus_9648#5 ------------------------------------------------------------
consensus_9648#0 ATCCGGCCAATCCATGCTTCAATGAGGGTGAATCGCTGAGTGGCATACAGCGGGGTGATG 913
consensus_9648#2 ------------------------------------------------------------
consensus_9648#3 ------------------------------------------------------------
consensus_9648#4 ------------------------------------------------------------
consensus_9648#1 --
consensus_9648#5 --
consensus_9648#0 CC 915
consensus_9648#2 --
consensus_9648#3 --
consensus_9648#4 --
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||