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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9659#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1049 fasta sequence
[CCGCCCACGCGTCC-CCCACGCGACCTGCAACACAGTGTTTCACGTTGTGCATTACG-CAAAGTTTATCTA-CCGG-TAAAGTGTGTAATATAT-CGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT-AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG-GGCACACACTTCTTCGTGCCGTG-GG-TGCAGC-GGCCGATCATTTTCGACATTCGGTCG-CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT-CACGCTCCGTATT-C-TGTTCC-GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG-TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATC-TGACCGAGCGTGCCG-CCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAAGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGGAGGCCGAGAAGGCCCGCTTCATGGTGGAGAAGGCGGAGC-AGATGAAGCAGGCGGCCATCATTACGGCCGAGGGTGACGCACAGGCCGCCCAGATGTTGGCCCGTTCGCTCAAAGAGTCCGGCGATGGTTTGATCGAGCTGCGACGTATTGAGGCGGCCGAGGATATCGCTTACCAGATGAGCCGGTCGCGTGGCGTCAACTATCTGCCGGCCGGACAGCAGACGCTGCTCAGTCTGCCACAGTAAGGGGTGGGAAGGGGATGGCAAAAGGAGGTTGTCCCCAGCTCGCAAGCTTACAACTTTAAAATAACGACGTTGTGTGTCGGGAGAGAATTTTGGTTTAAGTCGAAATGCTGTTTTGCTGTCC]
[+] EMBL BM615807 [CCGCCCACGCGT C CGTA GAACTGCAACACAGTGTTTCACGTTGTGCATTACG CAAAGTTTATCTA CCGG TAAAGTGTGTAATATAT CGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATC TGACCGAGCGTGCCG CCCAGTTCGGCGTGATAC ]
[+] EMBL BM615342 [CCGCCCACGCGTCCGCCCACGCGTCC GCAACACAGTGTTTCACGTTGTGCATTACG CAAAGTTTATCTA CCGG TAAAGTGTGTAATAGATGCGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATC TGACCGAGCGTGCCG CCCAGTT ]
[+] EMBL AL932068 [ cagaaTCC CCGAGGTTAACTGC ACACAGTGTTTCACGTTGTGCATTACG CAAAGTTTATCTACCCGG TAAAGTGTGTAAAATAT CGTCAAAA CAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCTAATGAGTGGCCGTCATCGGCGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGTGGCACACACTTCTTCGTGCCGTGTGGNTGCAGCTGGCCGATCATTTTCGACATTCGGTCGCCAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACATNCACGCTCCGTATTACTTGTTCCTGGCCGGTG CGGANCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGGTTGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCG ]
[+] EMBL BM585756 [ ccgGAACTGCAACACAGTGTTTCACGTTGTGCATTACG CAAAGTTTATCTA CCGG TAAAGTGTGTAATATAT CGTCAAAACCAACCCAGGAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCG ]
[+] EMBL BM589373 [ CCGGCAACACAGTGTTTCACGTTGTGCATTACGTCAAAGTTTATCTA CCGGATAAAGTGTGTAATATAT CGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGC ]
[+] EMBL BM578146 [ CCGGCAACACAGTGTTTCACGTTGTGCATTACG CAAAGTTTATCTA CCGG TAAAGTGTGTAATATAT CGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATCTTGACCGAGCGTGCCG CCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAAGAG ]
[+] EMBL BM605012 [ CCGGCAACACAGTGTTTCACGTTGTGCATTACG CAAAGTTTATCTA CCGG TAAAGTGTGTAATATAT CGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATC TGACCGAGCGTGCCGCCCCAGTTCGGCGTGATACTGGACGACATCTCC ]
[+] EMBL BM584980 [ ccgCTGCAACACAGTGTTTCACGTTGTGCATTACG CAAAGTTTATCTA CCGG TAAAGTGTGTAATATAT CGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATC TGACCGAGCGTGCCG CCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAAGAa ]
[+] EMBL BM645847 [ ccGCAACACAGTGTTTCACGTTGTGCATTACG CAAAGTTTATCTA CCGG TAAAGTGTGTAATATAT CGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATC TGACCGAGCGTGCCG CCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAAGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGGAGGCCGAGAAG ]
[+] EMBL BX605093 [ TAT CGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCT AGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATC TGACCGAGCGTGCCG CCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAAGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGGAGGCCGAGAAGGCCCGCTTCATGGTGGAGAAGGCGGAGC AGATG ]
[+] EMBL BM597907 [ ccgCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAG GGCACACACTTCTTCGTGCCGTG GG TGCAGC GGCCGATCATTTTCGACATTCGGTCG CAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACAT CACGCTCCGTATT C TGTTCC GCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGG TGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAAAAGGTGTCGGACGATC TGACCGAGCGTGCCG CCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAGGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGGAGGCCGAGAAGGCCCGCTTCATGGTGGAGAAGGCGGAGCAAGATGAAGCAGGCGGCCATCATTACGGCCGAGGGTGACGCACAGGCCGCCCAGATGTTGGCCCGTTCGCTCAAAGAGTCCGGCGATGGTTTGATCGAGCTGCGACGTATTGAGGCGGCCGAGGATATCGCTTACCAG ]
[+] EMBL BM591352 [ ccgGCAGCGTGAGATGGTGTCGCAAAAGGTGTCGGACGATC TGACCGAGCGTGCCG CCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAGGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGTAGGCCGAGAAGGCCCGCTTCATGGTGGAGAAGGCGGAGC AGATGAAGCAGGCGGCCATCATTACGGCCGAGGGTGACGCACAGGCCGCCCAGATGTTGGCCCGTTCGCTCAAAGAGTCCGGCGATGGTTTGATCGAGCTGCGACGTATTGAGGCGGCCGAGGATATCGCTTACCAGATGAGCCGGTCGCGTGGCGTCAACTATCTGCCGGCCGGACAGCAGACGCTGCTCAGTCTGCCACAGTAAGGGGTGGGAAGGGGATGGCAAAAGGAGGTTGTCCCCAGCTCGCAAGCTTACAACTTTAAAATAACGACGTTGTGTGTCGGGAGAGAATTTTGGTTTAAGTCGAAATGCTGTTTTGCTGTCC]
consensusID : consensus_9659#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1018 fasta sequence
[AAGAATTCCCGAGGTTACACAGTGTTTCACGTTGTGCATTACGCAAAGTTTATCTACCGGTAAAGTGTGTAATATATCTGNCAAAACCAACCCAGCAATGGCGAACGCAGTTCCGTGAGATCCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCNAGCAGCAGGTGACCGGCGAGGGCACAGGANTATCTATCGTGCCGTGGGTGCAGCGGCGATCATTCTTCGACATTCGGTCGCAGGCCGCGCAACGTACCGGGTCATCACCGGTAGTAACGGATCTTGNCAGGAACGTCAACAATCACGGCTCCGTTATTACTNGTTTCCCCGCCCGGGTTGCCCGGTGAAGCCNAAGACTCTGGGTCACCACAAACGGNAATTNCTNAGCAAACCAAAATGGCCCCTATCCGGGGTCCAGAGTCACTTTCTAAGCCGAAATAGTCAANGCGTGNAGTTNNGCACGTACACCNCCCATTGCGCAAATATCCAAAACAGGATAAGCGNCGAAAGAAGCNGTTCCTTTGCAAACGCAGNANNCNGCCTCCGNTATGGGAAGCACCNAATGATAACCCNAAACATGAGCGCGTGCGACCCTNTGAACANCCTGTGAAATTTCCANAAANTCCCAGCGCGGGTTGGCANAACCTTGAGCGTGGAANACCNGAGGCANGGAACAAAGGNGTNTACGTTAACAGCAGAAACGATAAGTACATTGGGACAGCCAGGAATGACCGACTTGGACCTTCACNCACAAAAGCGTGTGGAGNGNATNAAAATTACATGGGNGACNCNGAACAGCGATATANTTCCCCACACATAAAAACATNCCATGTANACTTCCAAAGTGATTCNTGACCANAACAANCAAGNTANAACAGCACACAGAAANCANACTGTCGCGACCAGAAACTANCACACCAGCAAGGATAAGGNTNCTAAC]
[+] EMBL AL696502 [AAGAATTCCCGAGGTTACACAGTGTTTCACGTTGTGCATTACGCAAAGTTTATCTACCGGTAAAGTGTGTAATATATCTGNCAAAACCAACCCAGCAATGGCGAACGCAGTTCCGTGAGATCCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCNAGCAGCAGGTGACCGGCGAGGGCACAGGANTATCTATCGTGCCGTGGGTGCAGCGGCGATCATTCTTCGACATTCGGTCGCAGGCCGCGCAACGTACCGGGTCATCACCGGTAGTAACGGATCTTGNCAGGAACGTCAACAATCACGGCTCCGTTATTACTNGTTTCCCCGCCCGGGTTGCCCGGTGAAGCCNAAGACTCTGGGTCACCACAAACGGNAATTNCTNAGCAAACCAAAATGGCCCCTATCCGGGGTCCAGAGTCACTTTCTAAGCCGAAATAGTCAANGCGTGNAGTTNNGCACGTACACCNCCCATTGCGCAAATATCCAAAACAGGATAAGCGNCGAAAGAAGCNGTTCCTTTGCAAACGCAGNANNCNGCCTCCGNTATGGGAAGCACCNAATGATAACCCNAAACATGAGCGCGTGCGACCCTNTGAACANCCTGTGAAATTTCCANAAANTCCCAGCGCGGGTTGGCANAACCTTGAGCGTGGAANACCNGAGGCANGGAACAAAGGNGTNTACGTTAACAGCAGAAACGATAAGTACATTGGGACAGCCAGGAATGACCGACTTGGACCTTCACNCACAAAAGCGTGTGGAGNGNATNAAAATTACATGGGNGACNCNGAACAGCGATATANTTCCCCACACATAAAAACATNCCATGTANACTTCCAAAGTGATTCNTGACCANAACAANCAAGNTANAACAGCACACAGAAANCANACTGTCGCGACCAGAAACTANCACACCAGCAAGGATAAGGNTNCTAAC]
consensusID : consensus_9659#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 681 fasta sequence
[CCGCCCACGCGTCCG-GAACTGCAACACAGTGTTTCACGTTGTGCATTACGCAAAGTTTATCTACCG-----ATATCGTCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGGGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTTCGACATTCGGTCGCAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACATCACGCTCCGTATTCTGTTCCGCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAAAAGGTGTCGGACGATCTGACCGAGCGTGCCGCCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAGGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGGAGGCCGAGAAGGCCCGCT]
[+] EMBL BM656407 [CCGCCCACGCGTCCGAGAACTGCAACACAGTGTTTCACGTTGTGCATTACGCAAAGTTTATCTACCG ATATCGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGGGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTTCGACATTCGGTCGCAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACATCACGCTCCGTATTCTGTTCCGCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATCTGACCGAGCGTGCCGCCCAGTTCGGCG ]
[+] EMBL BM596795 [ CCG GAACTGCAACACAGTGTTTCACGTTGTGCATTACGCAAAGTTTATCTACCG ATATCGTCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGGGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTTCGACATTCGGTCGCAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGCCAACATCACGCTCCGTATTCTGTTCCGCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAAAAGGTGTCGGACGATCTGACCGAGCGTGCCGCCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAGGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGGAGGCCGAGAAGGCCCGCT]
[+] EMBL BM601596 [ cc GAACTGCAACACAGTGTTTCACGTTGTGCATTACGCAAAGTTTATCTACCGGTAAAATATCGTCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGGGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTTCGACATTCGGTCGCAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACATCACGCTCCGTATTCTGTTCCGCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAAAAGGTGTCGGACGATCTGACCGAGCGTGCCGCCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAGG ]
consensusID : consensus_9659#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 675 fasta sequence
[CCGCGGACGCGTGGGCGCAAAGTTTATCTACCGGTAAAGTGTGTAATATATCGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGGGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTTCGACATTCGGTCGCAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACATCACGCTCCGTATTCTGTTCCGCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATCTGACCGAGCGTGCCGCCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAAGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGGAGGCCGAGAAGGCCCGCTTCATGGTGGAGAA]
[+] EMBL BM597110 [CCGCGGACGCGTGGGCGCAAAGTTTATCTACCGGTAAAGTGTGTAATATATCGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGGGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTTCGACATTCGGTCGCAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACATCACGCTCCGTATTCTGTTCCGCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGAAGGCGGTCGTGGCCCAGTTCGATGCGGGCGAGCTGATCACGCAGCGTGAGATGGTGTCGCAGAAGGTATCGGACGATCTGACCGAGCGTGCCGCCCAGTTCGGCGTGATACTGGACGACATCTCCATTACGCATCTCACGTTCGGCAAAGAGTTTACGCAGGCCGTCGAAATGAAGCAGGTCGCGCAGCAGGAGGCCGAGAAGGCCCGCTTCATGGTGGAGAA]
[+] EMBL BM603339 [ ccGCGCAAAGTTTATCTACCGGTAAAGTGTGTAATATATCGCCAAAACCAACCCAGCAATGGCAACGCAGTTCCTGAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGGCGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGATCGATTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGGGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTTCGACATTCGGTCGCAGCCGCGCAACGTACCGGTCATCACCGGTAGTAAGGATCTGCAGAACGTCAACATCACGCTCCGTATTCTGTTCCGCCCGGTGCCGGACCAGCTGCCAAAGATCTACACCATCCTCGGGCAGGATTACGACGAGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGAAG ]
consensusID : consensus_9659#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 319 fasta sequence
[GTTGTAGCNTCCNCNCAAGCAATAATCTACCCGAGGGATGTTTANTTTTGTNTATTACNCAAAGTNANCTACCGGTNAAGTGTGTAAANATCGTCTAAAACAACCCAGCAACTGGCANGCAGTTCCTGAATCGTATCGGGCAGCTCGGTCTAGAGTGGCCGTCATCGGCGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTCCGATCGACTTCAGCGGCGTCAAGCACATTGTGACCGGCGAGGTGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTNCAGACATC]
[+] EMBL AL933742 [GTTGTAGCNTCCNCNCAAGCAATAATCTACCCGAGGGATGTTTANTTTTGTNTATTACNCAAAGTNANCTACCGGTNAAGTGTGTAAANATCGTCTAAAACAACCCAGCAACTGGCANGCAGTTCCTGAATCGTATCGGGCAGCTCGGTCTAGAGTGGCCGTCATCGGCGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTCCGATCGACTTCAGCGGCGTCAAGCACATTGTGACCGGCGAGGTGCACACACTTCTTCGTGCCGTGGGTGCAGCGGCCGATCATTTNCAGACATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9659#0 ------CCGCCCACGCGTCCCCCACGCGACCTGCAACACAGTGTTTCACGTTGTGCATTA 54
consensus_9659#2 ------CCGCCCACGCGTCCG------GAACTGCAACACAGTGTTTCACGTTGTGCATTA 48
consensus_9659#3 ---------------------------------------------CCGCGG-ACGCGTGG 14
consensus_9659#4 GTTGTAGCNTCCNCNCAAGCAATAATCTACCCGAGGGA---TGTTTANTTTTGTNTATTA 57
consensus_9659#1 ------------AAGAATTCCC-------GAGGTTACACAGTGTTTCACGTTGTGCATTA 41
*
consensus_9659#0 -CGCAAAGTTTATCTACCGGTAAAGTGTGTAATATATC-GCCAAAACCAACCCAGCAATG 112
consensus_9659#2 -CGCAAAGTTTATCTACCG--------------ATATC-GTCAAAACCAACCCAGCAATG 92
consensus_9659#3 GCGCAAAGTTTATCTACCGGTAAAGTGTGTAATATATC-GCCAAAACCAACCCAGCAATG 73
consensus_9659#4 -CNCAAAGTN-ANCTACCGGTNAAGTGTGTAA-ANATC-GTCTAAAACAACCCAGCAACT 113
consensus_9659#1 -CGCAAAGTTTATCTACCGGTAAAGTGTGTAATATATCTGNCAAAACCAACCCAGCAATG 100
* ****** * ****** * *** * * *** ***********
consensus_9659#0 GC-AACGCAGTTCCT---GAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGG 168
consensus_9659#2 GC-AACGCAGTTCCT---GAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGG 148
consensus_9659#3 GC-AACGCAGTTCCT---GAATCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGG 129
consensus_9659#4 GG-CANGCAGTTCCT---GAATCGTATCGGGCAGCTCGGTCTAG-AGTGGCCGTCATCGG 168
consensus_9659#1 GCGAACGCAGTTCCGTGAGATCCGTATCGGTCAGCTCGGTCTAGGAGTGGCCGTCATCGG 160
* * ******** ** ******** ************* ***************
consensus_9659#0 CGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGA 228
consensus_9659#2 CGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGA 208
consensus_9659#3 CGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGA 189
consensus_9659#4 CGGTGTTGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTCCGA 228
consensus_9659#1 CGGTGTAGTAAACTCGGCGTTATATAACGTTGACGGTGGCCATCGGGCGGTCATTTTCGA 220
****** ************************************************* ***
consensus_9659#0 TCGA-TTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGG-GCACACACTTCT---TCGTG 283
consensus_9659#2 TCGA-TTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGG-GCACACACTTCT---TCGTG 263
consensus_9659#3 TCGA-TTCAGCGGCGTCAAGCAGCAGGTGACCGGCGAGG-GCACACACTTCT---TCGTG 244
consensus_9659#4 TCGACTTCAGCGGCGTCAAGCACATTGTGACCGGCGAGGTGCACACACTTCT---TCGTG 285
consensus_9659#1 TCGA-TTCAGCGGCGTCNAGCAGCAGGTGACCGGCGAGG-GCACAGGANTATCTATCGTG 278
**** ************ **** ************* ***** * * *****
consensus_9659#0 CCGTGGGTGCAGCGGCCGATCATTTTC-GACATTCGGTCGCAG-CCGCGCAACGTACCGG 341
consensus_9659#2 CCGTGGGTGCAGCGGCCGATCATTTTC-GACATTCGGTCGCAG-CCGCGCAACGTACCGG 321
consensus_9659#3 CCGTGGGTGCAGCGGCCGATCATTTTC-GACATTCGGTCGCAG-CCGCGCAACGTACCGG 302
consensus_9659#4 CCGTGGGTGCAGCGGCCGATCATTTNCAGACATC-------------------------- 319
consensus_9659#1 CCGTGGGTGCAGCGGC-GATCATTCTTCGACATTCGGTCGCAGGCCGCGCAACGTACCGG 337
**************** ******* *****
consensus_9659#0 -TCATCACCGGTAGTAA-GGATCT--GCAG-AACGTCAACA-TCACG-CTCCGT-ATT-- 391
consensus_9659#2 -TCATCACCGGTAGTAA-GGATCT--GCAG-AACGTCAACA-TCACG-CTCCGT-ATT-- 371
consensus_9659#3 -TCATCACCGGTAGTAA-GGATCT--GCAG-AACGTCAACA-TCACG-CTCCGT-ATT-- 352
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 GTCATCACCGGTAGTAACGGATCTTGNCAGGAACGTCAACAATCACGGCTCCGTTATTAC 397
consensus_9659#0 CTGTT---CCGCCCGG--TGCCGGACCAGCTGCCAAAGA-TCTACACCATCCTCGGGCAG 445
consensus_9659#2 CTGTT---CCGCCCGG--TGCCGGACCAGCTGCCAAAGA-TCTACACCATCCTCGGGCAG 425
consensus_9659#3 CTGTT---CCGCCCGG--TGCCGGACCAGCTGCCAAAGA-TCTACACCATCCTCGGGCAG 406
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 TNGTTTCCCCGCCCGGGTTGCCCGGTGAA--GCCNAAGACTCTGGGTCACCACAAACGGN 455
consensus_9659#0 GATTACGACG--------AGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGA----AG 493
consensus_9659#2 GATTACGACG--------AGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGA----AG 473
consensus_9659#3 GATTACGACG--------AGCGGGTGCTCCCCTCCATCACGACGGAAGTGCTGA----AG 454
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 AATTNCTNAGCAAACCAAAATGGCCCCTATCCGGGGTCCAGAGTCACTTTCTAAGCCGAA 515
consensus_9659#0 GCGGTCGTGGCC--CAGTTCGATGCGGGCGA-GCTGATCACGCAG---CGTGAGATGGTG 547
consensus_9659#2 GCGGTCGTGGCC--CAGTTCGATGCGGGCGA-GCTGATCACGCAG---CGTGAGATGGTG 527
consensus_9659#3 GCGGTCGTGGCC--CAGTTCGATGCGGGCGA-GCTGATCACGCAG---CGTGAGATGGTG 508
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 ATAGTCAANGCGTGNAGTTNNGCACGTACACCNCCCATTGCGCAAATATCCAAAACAGGA 575
consensus_9659#0 T---CGCAGAAGGTATCGGACGATCTG---ACCGAGCGTGCCGCC-CAGTTCGGCGTGAT 600
consensus_9659#2 T---CGCAAAAGGTGTCGGACGATCTG---ACCGAGCGTGCCGCC-CAGTTCGGCGTGAT 580
consensus_9659#3 T---CGCAGAAGGTATCGGACGATCTG---ACCGAGCGTGCCGCC-CAGTTCGGCGTGAT 561
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 TAAGCGNCGAAAGAAGCNGTTCCTTTGCAAACGCAGNANNCNGCCTCCGNTATGGGAAGC 635
consensus_9659#0 ACTGGACGACATCTCCAT---TACGCATCTCACGTTCGGCAAAGAGTTTACGCAGGCCGT 657
consensus_9659#2 ACTGGACGACATCTCCAT---TACGCATCTCACGTTCGGCAAGGAGTTTACGCAGGCCGT 637
consensus_9659#3 ACTGGACGACATCTCCAT---TACGCATCTCACGTTCGGCAAAGAGTTTACGCAGGCCGT 618
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 ACCNAATGATAACCCNAAACATGAGCGCGTGCGACCCTNTGAACANCCTGTGAAATTTCC 695
consensus_9659#0 CGAAAT----GAAGCAGGTCG-CGCAGCAGGAGGCCGAGAAGGCCCGCTTCATGGTGGAG 712
consensus_9659#2 CGAAAT----GAAGCAGGTCG-CGCAGCAGGAGGCCGAGAAGGCCCGCT----------- 681
consensus_9659#3 CGAAAT----GAAGCAGGTCG-CGCAGCAGGAGGCCGAGAAGGCCCGCTTCATGGTGGAG 673
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 ANAAANTCCCAGCGCGGGTTGGCANAACCTTGAGCGTGGAANACCNGAGGCANGGAACAA 755
consensus_9659#0 AAGGCGGAGCAGATGAAGCAGGCGGCCATCATTACGGCCGAGGGTGACGCACAGGCCGCC 772
consensus_9659#2 ------------------------------------------------------------
consensus_9659#3 AA---------------------------------------------------------- 675
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 AGGNGTNTACGTTAACAGCAGA-AACGATAAGTACATTGG-----GACAGCCAGGAATGA 809
consensus_9659#0 CAGATGTTGGCCCGTTCGCTCAAAGAGTCCGGCGATGGTTTGATCGAGCTGCGACGTATT 832
consensus_9659#2 ------------------------------------------------------------
consensus_9659#3 ------------------------------------------------------------
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 CCGACTTGGACCTTCACNCACAAAAGCGTGTGGAGNGNATNAAAATTACATGGGNGACNC 869
consensus_9659#0 GAGGCGGCCGAGGATATCGCTTACCAGATGAGCCGGTCGCGTGGCGTCAACTATCTGCCG 892
consensus_9659#2 ------------------------------------------------------------
consensus_9659#3 ------------------------------------------------------------
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 NGAACAGCGATATANTTCCCCACACATAAAAACATNCCATGTAN-ACTTCCAAAGTGATT 928
consensus_9659#0 GCCGGACAGCAGACGCTGCTCAGTCTGCCACAGTAAGGGGTGGGAAGGGGATGGCAAAAG 952
consensus_9659#2 ------------------------------------------------------------
consensus_9659#3 ------------------------------------------------------------
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 CNTGACCANAACAANCAAGNTANAACAGCACACAGAAANCANACTGTCGCGACCAGAAAC 988
consensus_9659#0 GAGGTTGTCCCCAGCTCGCAAGCTTACAACTTTAAAATAACGACGTTGTGTGTCGGGAGA 1012
consensus_9659#2 ------------------------------------------------------------
consensus_9659#3 ------------------------------------------------------------
consensus_9659#4 ------------------------------------------------------------
consensus_9659#1 TANCACACCAGCAAGGATAAGGNTNCTAAC------------------------------ 1018
consensus_9659#0 GAATTTTGGTTTAAGTCGAAATGCTGTTTTGCTGTCC 1049
consensus_9659#2 -------------------------------------
consensus_9659#3 -------------------------------------
consensus_9659#4 -------------------------------------
consensus_9659#1 -------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||