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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9682#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1407 fasta sequence
[GCAAGAATCGGCCCGAGGGGCTNNTTATTTGGATTTAATTGCGTAGTTTTCGCAGAAATTCTACTATCGTGCTCAGTGATGTTACAAAATGGGATATTTTTGAGCTGTCAAAACCCATCAACAAAAAATAT-CCAAATAGCTCCAGCTCG-GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA-ATG-TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA-TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC-GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA-GTGCCGGAAGCTGA-TGC-TGTTC-TA-TA-TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG-AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT-CCCCAAACACC-AAATACCA-GAAATAGAGTTTAAGCACC-GGGTCTCGTGTAGTGCATTTTGT-CA-TTGAA-AGTTGTT-AGAAG-AAGCTCTGTG-AATAATACCCT-CGATAATAGTAAA-CCAATA-GCATTGAA-TTCGAAATGAAGGTGAAGAAA-AA-CATCCTCGT--CGGCTG-TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT-GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA-CCCGGTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCA-CCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGCG-GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAAATGGTTATGTTTCTTTATTTTTCTGAAAAAAAAAAAA]
[+] EMBL BX466370 [GCAAGAATCGGCCCGAGGGGCTNNTTATTTGGATTTAATTGCGTAGTTTTCGCAGAAATTCTACTATCGTGCTCAGTGATGTTACAAAATGGGATATTTTTGAGCTGTCAAAACCCATCAACAAAAAATATCCCAAATAGCTCCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATGCCCCAAACACCGAAATACCAGGAAATAGAGTTTAAGCACCGGGGTCTCGTGTAGTGCATTTTGTCCATTTGAACAGTTGTTNAGAAGCAAGCTCTGTGAAATAATACCCTCCGATTATAGTAAANCCAATANGCATTGAATTTCGAAATGAAGGTCAAGAAACAACCATCCTCCTTACGGCTGTTACCGGAAGTG ]
[+] EMBL CNS08GN1 [ ggAAAAAATTT CCAAATAGC CCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAA AACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCAACCGCACCGGAAAAGGGTAGCTTCCCGCTGGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACGT CCCTAAACACC AAATACCA GAAATAGAGTTTAAGCCCC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCTGGGTGGAAAAACTGCTCCAGCTGGCCG ]
[+] EMBL CNS08R32 [ ccATAT CCAAATAGCTCCAGCTCGTGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCATTGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGACCGAGTTTGAGGTGGAAGTACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGACTCTGCCGGCCGCGGTCACACTCCACACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAGTGGGCCGACCTGCTCGTGATTTCA CCACTAGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCG ]
[+] EMBL CNS08O9N [ CCAAATAGCT CAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATTAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCag ]
[+] EMBL BM591655 [ ccgCAAATAGCTCCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG ]
[+] EMBL CNS08DQJ [ aa atAAATAGCTCCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATGCTTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAA AACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCAACCGCACCGGAAAAGGGTAGCTTCCCGCTGGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACCCCAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACGT CCCTAAACACC AAATACCA GAAATAGAGTTTAAGCCCC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCA CCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACTTTTCGCGCCTGGGATCCGACGAAA ]
[+] EMBL CNS096BB [ tATAGCTCTAGCTCGCGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAA AACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCAACCGCACCGGAAAAGGGTAGCTTCCCGCTGGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAGCCGGAACAATCTTAACGT CCCTAAACACC AAATACCA GAAATAGAGTTTAAGCCCC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGG ]
[+] EMBL CNS08IQW [ TAGCTCCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCATTGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGACCGAGTTTGAGGTGGAAAAAAACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAGTGGGCCGACCTGCTCGTGATTTCA CCACTAGACGCTAACAGCCTCGCCAAGATGGCC ]
[+] EMBL BX608004 [ ATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTT ]
[+] EMBL CNS09JJO [ CATAAATTATTGTGTGCGATATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAA AACGAGCTCCCTGCACCAGTACGATGACTGTCTATGACATTTGGCCAGAAAAAGTTTATCCCAACCGCACCGGAAAAGGGTAGCTTCCCGCTGGACCACGGCGGCCAGGTGCCGGAAGCTGAGTGCGTGTTCGTAGTAGTGCGCT ]
[-] EMBL CNS08R33 [ CTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCATTGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGACCGAGTTTGAGGTGGAAGTACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAGTGGGCCGACCTGCTCGTGATTGCA CCACTAGACGCTTACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGTG GCGATACGGGGCTGGGTGCGATGGCCGAAGTGGATACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAAATGGTTATGTTTt ]
[-] EMBL CNS08IQX [ GTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGTTGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGT TTTACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCATTGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGACCGAGTTTGAGGTGGAAGTACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGTTCTGCCGGCCGCGGTCACACTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAGTGGGCCGACCTGCTCGTGATTGCA CCACTAGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGTG GCGATACGGGGCTGGGTGCGATGGCCGAAGTGGATACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAAATGGTTAT ]
[-] EMBL CNS08GN2 [ CAAACCGGAACAATCTTAACGT CCCTAAACACC AAATACCA GAAATAGAGTTTAAGCCCC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCA CCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTTCGAAAACGCTCATGTGCG GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAAATGGTTATGTTTCTTTATTTTTCTGAAAAAAAAAAAA]
[-] EMBL CNS09JJP [ GCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCCGGTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCACCCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGCG GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGAAAAGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATA ]
[-] EMBL CNS096BC [ GAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGTTCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCC GTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCA CCGCTCGGCGCTTACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGAAACGCGCCTGGGATCCGACGAAACCGTTGCTCTTTTGTCCCGCGATGAAAACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGCG GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTG GATTTAATGGAATAAAT GTTAT ]
[-] EMBL CNS08DQK [ TTCTCGCCGCAGGGTCTGCCGGGGGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCC TTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCACCCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTTCGAAAACGCTCATGTGCG GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGGGCAGAGTTGAGATTTAATGGAATAAATGGTTATGTTTCT ]
[-] EMBL CNS08O9O [ CTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGCGCGCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATA ]
consensusID : consensus_9682#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 795 fasta sequence
[GAATNGGCCGAGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGACGTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCAGTGCCGGAAGCTGATGCTGTTCTATATGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATCCCCAAACACCAAATACCAGAAATAGAGTTTAAGCACCGGGTCTCGTGTAGTGCATTTTGTCATTGAAAGTTGTTAGAAGAAGCTCTGTGAATAATACCCTCGATAATAGTAAACCAATAGCATTGAATTCGAAATGAAGGTGAACGAAAAACATCCTCGTCGGCTGTACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCTGGTGGAAAAACTGCGTCCAGCTGACCGAGTTTGAGGTGGAATACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACANTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCGGTCCTGCACATCGAGCTGGGCC]
[+] EMBL AL934862 [GAATNGGCCGAGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGACGTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCAGTGCCGGAAGCTGATGCTGTTCTATATGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATCCCCAAACACCAAATACCAGAAATAGAGTTTAAGCACCGGGTCTCGTGTAGTGCATTTTGTCATTGAAAGTTGTTAGAAGAAGCTCTGTGAATAATACCCTCGATAATAGTAAACCAATAGCATTGAATTCGAAATGAAGGTGAACGAAAAACATCCTCGTCGGCTGTACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCTGGTGGAAAAACTGCGTCCAGCTGACCGAGTTTGAGGTGGAATACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACANTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCGGTCCTGCACATCGAGCTGGGCC]
consensusID : consensus_9682#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence
[CCGGTTTTCGCAGAAATTCTACTATCGTGCTCAGTGATGTTACAAAATGCAAGGAACCACACGATATTTCCATTTTTTCTTAAATTTTGATTCTCTTTTTCCGTTATTTTGCTTCCTTTCAAATCATTCCGCCCAACGGACCAAAGGGGATATTTTTGAGCTGTCAAAACCTATCAACAAAAAATATCCCAAATAGCTCCAGCTCGGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCCTGCATAAATTATTGTGTGCGAATGTTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCAACGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGGTGAGTTATCGTTTGTTGAAGCTGTCTAATTAGTTTGTTTGACCAATTTTGTGTTAAATTACATTAACTACTCTCGTTTCAAATGGTTTCATCATATAGCTTATGCCACACTTGCTTTTAACAGCGTAAGGAAGGCTCTTCCTCCTCCCAAAAATAACCCAAAACAAACCATGCACAGGGTGTCTCGGAACGCATCCCAAGAACCGTCCCATTTTGCTCTGTTTGCTGCAATGTGCATTAAAATTTCATTTCCATAAATTC]
[+] EMBL BM633769 [CCGGTTTTCGCAGAAATTCTACTATCGTGCTCAGTGATGTTACAAAATGCAAGGAACCACACGATATTTCCATTTTTTCTTAAATTTTGATTCTCTTTTTCCGTTATTTTGCTTCCTTTCAAATCATTCCGCCCAACGGACCAAAGGGGATATTTTTGAGCTGTCAAAACCTATCAACAAAAAATATCCCAAATAGCTCCAGCTCGGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCCTGCATAAATTATTGTGTGCGAATGTTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCAACGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGGTGAGTTATCGTTTGTTGAAGCTGTCTAATTAGTTTGTTTGACCAATTTTGTGTTAAATTACATTAACTACTCTCGTTTCAAATGGTTTCATCATATAGCTTATGCCACACTTGCTTTTAACAGCGTAAGGAAGGCTCTTCCTCCTCCCAAAAATAACCCAAAACAAACCATGCACAGGGTGTCTCGGAACGCATCCCAAGAACCGTCCCATTTTGCTCTGTTTGCTGCAATGTGCATTAAAATTTCATTTCCATAAATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9682#0 GCAAGAATCGGCCCGAGGGGCTNNTTATTTGGATTTAATTGCGTAGTTTTCGCAGAAATT 60
consensus_9682#1 ------------------------------------------------------------
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 CTACTATCGTGCTCAGTGATGTTACAAAATGGGATATTTTTGAGCTGTCAAAACCCATCA 120
consensus_9682#1 ------------------------------------------------------------
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 ACAAAAAATATCCAAATAGCTCCAGCTCGGATGGAGGTGCGGCGAAACACGCACGATTAA 180
consensus_9682#1 ------------------------------------------------------------
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 TGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGAATGTTTTACATACTGGT 240
consensus_9682#1 ----------------------------------------------------GAATNGGC 8
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 GGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCAT 300
consensus_9682#1 CGA---GTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCAT 65
consensus_9682#2 ---------CCGGTTTTCGCAGAAATTCTACT-ATCGTGCTCAGTGATGTTACA---AAA 47
** * * ** *** * ** * * * ** * *
consensus_9682#0 CGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGC 360
consensus_9682#1 CGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGC 125
consensus_9682#2 TGCAAGGAACCACACGATATTTCCATTTTTTC--------TTAAATTTTGATTCTCTTTT 99
* ** * *** ** *** * ** *** ** * *
consensus_9682#0 ACCAGTACGATGACGTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAA 420
consensus_9682#1 ACCAGTACGATGACGTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAA 185
consensus_9682#2 TCCGTTATTTTGCTTCCTTTCAAATC------------ATTCCGCCCAACGG-ACCA-AA 145
** ** ** ** * * ** ** *** ** * *** **
consensus_9682#0 AAGGGTAGCTTCCCGCTAGACCACGGCGGCCAGTGCCGGA-AGCTGATGCTGTTCTATAT 479
consensus_9682#1 AAGGGTAGCTTCCCGCTAGACCACGGCGGCCAGTGCCGGA-AGCTGATGCTGTTCTATAT 244
consensus_9682#2 GGGGATATTTTTGAGCT-GTCAAAACCTATCAACAAAAAATATCCCAAATAGCTCCAGCT 204
** ** ** *** * * * * ** * * * * * ** * *
consensus_9682#0 GCGCTGCC--TGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAGCC 537
consensus_9682#1 GCGCTGCC--TGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAGCC 302
consensus_9682#2 CGGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCCTGCAT 264
* ** **** *** * ***** * * * * *
consensus_9682#0 TACCTGCAGTGC-CGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGG 596
consensus_9682#1 TACCTGCAGTGC-CGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGG 361
consensus_9682#2 AAATTATTGTGTGCGAATGTTTTACATACTGGTGGAAGTGTGTGCATTGT--AGTTCAAG 322
* * *** ** *** * ** *** *** * * * ** * * * *
consensus_9682#0 CTACA---GCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATCCCCAAAC 653
consensus_9682#1 CTACA---GCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATCCCCAAAC 418
consensus_9682#2 CCCTATTTGCTGTAATAAATTCGATTGAACCTCAACGGAACAGAA--GACAT----GAGG 376
* * ** ** * *** * * ** * * ******* **** *
consensus_9682#0 ACCAAATACCAGAAATAGAGTTTAAGCACCGGGTCTCGTGTAGTGCATTTTGTCATTGAA 713
consensus_9682#1 ACCAAATACCAGAAATAGAGTTTAAGCACCGGGTCTCGTGTAGTGCATTTTGTCATTGAA 478
consensus_9682#2 TTTATGTAACGTCGGTAGCGGCAAAACAACGAG----GTGAGTTATCGTTTGTTG----A 428
* ** * *** * ** ** ** * *** * ***** *
consensus_9682#0 AGTTGTTAGAAGAAGCTCTGTGAATAATACCCTCGATAATAGTAAACCAATAGCATTGAA 773
consensus_9682#1 AGTTGTTAGAAGAAGCTCTGTGAATAATACCCTCGATAATAGTAAACCAATAGCATTGAA 538
consensus_9682#2 AGCTGTCTAATTAGTTTGTTTGACCAATTTTGT--GTTAAATTACATTAACTACTCTCGT 486
** *** * * * * *** *** * * * * ** * ** * *
consensus_9682#0 TTCGAAATGAAGGTGAA-GAAAAACATCCTCGTCGGCTGTACCGGA-AGTGTGGCCACGA 831
consensus_9682#1 TTCGAAATGAAGGTGAACGAAAAACATCCTCGTCGGCTGTACCGGA-AGTGTGGCCACGA 597
consensus_9682#2 TTC-AAATGGTT-TCATCATATAGCTTATGCCACACTTGCTTTTAACAGCGTAAGGA--- 541
*** ***** * * * * * * * * ** * ** ** *
consensus_9682#0 TCAAGCTTCCCCTGCTGGTGGAAAAACTGC-TCCAGCTGGCCGAGTTCGAGGTGGAAGTA 890
consensus_9682#1 TCAAGCTTCCCCTGCTGGTGGAAAAACTGCGTCCAGCTGACCGAGTTTGAGGTGGAA-TA 656
consensus_9682#2 --AGGCTCTTCCTCCT--CCCAAAAATAACCCAAAACAAACCATGCACAGGGTGTCTCGG 597
* *** *** ** ***** * * * ** * ****
consensus_9682#0 CACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCG 950
consensus_9682#1 CACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCG 716
consensus_9682#2 AACG-CATCCCAAG-AACCGTCCCATTTTGCTCTGTTTGCTGCA--ATGTGC--ATTAAA 651
*** *** ** * * * ** *** * ** *** ** ***
consensus_9682#0 GTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCGGTC 1010
consensus_9682#1 GTCACANTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCGGTC 776
consensus_9682#2 ATTTCATTTC-CATAAATTC---------------------------------------- 670
* ** * * * * *
consensus_9682#0 CTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCACCGCTCGACGCTAAC 1070
consensus_9682#1 CTGCACATCGAGCTGGGCC----------------------------------------- 795
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 AGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCC 1130
consensus_9682#1 ------------------------------------------------------------
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 TGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACAT 1190
consensus_9682#1 ------------------------------------------------------------
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 CCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGC 1250
consensus_9682#1 ------------------------------------------------------------
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 ATTGCGAAAACGCTCATGTGCGGCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACG 1310
consensus_9682#1 ------------------------------------------------------------
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 ATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAA 1370
consensus_9682#1 ------------------------------------------------------------
consensus_9682#2 ------------------------------------------------------------
consensus_9682#0 ATGGTTATGTTTCTTTATTTTTCTGAAAAAAAAAAAA 1407
consensus_9682#1 -------------------------------------
consensus_9682#2 -------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||