cluster # 9688

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Anopheles gambiae
cluster # 9688 cluster # 9688 Sequences # 19 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9688#0 length = 931 sequences # 13

consensus_9688#1 length = 719 sequences # 5
consensus_9688#2 length = 638 sequences # 1

consensusID : consensus_9688#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 931
fasta sequence

                              [GGATATCATCCCTCGCATTAGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG-GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC-GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT-AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCT-GGGTA-GGGCGGGGGAAGGGAGACCGAT-GGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCACTGCCAT-CCTTAGACAATATTTTCTACTTCCTCCTCATCTTCTTCTATCCAAACTTTTTCATTTAACTGGTTCCAAAAGCGTTTCTTAAATTATGATGTTCTATTTCCGTCAAACAAACTTCCTTCCACCCTCTTATTGTATGTAAATAGCCCGTTGATAGTTTGTAAATAAAACAACC-AACAAAATCAAAAAAAAAAAAAAGGCCACATGTGCT]

[+] EMBL CNS098YF             [GGATATCATCCCTCGCATTAGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCA GACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGGTGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCA GGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCT GGGTA GGGCGGGGGAAGGGAGACCGAT GGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCACTGCCAT CCTTAGACAATATTTTCTACTTCCTCCTCATCTTCTTCTATCCAAACTTTTTCATTTAACTGGTTCCAAAAGCGTTTCTTAAATTATGATGTTCTATTTCCGTCAAACAAACTTCCTTCCACCCTCTTATTGTATGAAAAAAGCCCGTTGATAGTTTGTAAATAAAACAACC AACAAAATCAAAAAAAAAAAAAAGGCCACATGTGCT]
[+] EMBL BM635789             [          CCGCGCATTAGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCT GGGTAGGGGCGGGGGAAGGGAGACCGATGGGGCGTTAGGA                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS098YG             [               CATTAG TTTTTTTTTTCCACAACACAACTGCTCTGCTCGCACAGCACAAACAACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGT GCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCAACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGAACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGGTGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGGGCGGGAAGACGCTCGAGAAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGAAACATACTCCACTAGTGCACCAACCTGCCT GGGTA GGGCGGGGGAAGGGAGACCGAT GGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTTACTGCCAT CCTTAGACAATATTTTCTACTTCCTCCTCATCTTCTTCTATCCAAACTTTTTCATTTTACTGGTTCCAAAAGCGTTTCTTAAATTATGATGTTCTATTTCCGTCAAACAAACTTCCTTCCACCCTCTTATTGTATGTAAATAGCCCGTTGATAGTTTGTAAATAAAGTAACCAAACAAAATCAA                         ]
[+] EMBL BM624143             [              ccgTTAGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACATACTACTACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGTGTGGCCAGTCGGACCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCACGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTTGAGCAGATCCGCGCCAACACGCCGCGTGACGACCCCAACTTCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM609745             [                ccgAGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAAGCACACCTGA                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM618447             [                 ccgGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGTCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCT GGGTA GGGCGGGGGAAGGGAGACCGAT GGGCGTTAGGAGGTCCACGCAGGTCCCCGTAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAA                                                                                                                                                                                                                                ]
[+] EMBL BM623245             [                  ccGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCT GGGTA GGGCGGGGGAAGGGAGACCGAT GGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCGCCA                                                                                                                                                                                                                                                                              ]
[+] EMBL BM647338             [                  ccGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGGTA GGGCGGGGGAAGGGAGACCGAT GGGCGTTAGGAGGTCCACGCAGGTCCCCGTAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCGAGGGGCATCCAAACCGTCACTGCCAT CCTT                                                                                                                                                                                                             ]
[+] EMBL BM618444             [                  ccGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM575515             [                          ccgAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCT GGGTA GGGCGGGGGAAGGGAGACCGATGGGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCACTGCCAT CCTTAGACA                                                                                                                                                                                                        ]
[+] EMBL BM648449             [                                           ccGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCG GTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCAC GTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCT GGGTA GGGCGGGGGAAGGGAGACCGAT GGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAG                                                                                                                                                                                                                                                      ]
[+] EMBL BM649119             [                                                                                                                                                                                                                                                                                                                                                                                                           AAGACGCTCGAGCAGATCCGCCCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTT AAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCT GGGTA GGGCGGGGGAAGGGAGACCGAT GGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCACTGCCATCCCTTA                                                                                                                                                                                                            ]
[+] EMBL BM649900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgATCCAAACTTTTTCATTTAACCGGTTCCAAAAGCGTTTCTTAAATTATGATGTTCTATTTCCGTCAAACAAACTTCCTTCCACCCTCTTATTGTATGTAAATAGCCCGTTGATAGTTTGT                                                  ]




>consensus_9688#0
GGATATCATCCCTCGCATTAGCTTTTATCAAGCCACAACACCACTGCTCTGCTCGCACAG
CACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTC
GCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTC
AACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAG
AGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTC
CAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTG
CCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAAC
CCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTG
AGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAG
TCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGTAGG
GCGGGGGAAGGGAGACCGATGGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCG
CCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCACTGC
CATCCTTAGACAATATTTTCTACTTCCTCCTCATCTTCTTCTATCCAAACTTTTTCATTT
AACTGGTTCCAAAAGCGTTTCTTAAATTATGATGTTCTATTTCCGTCAAACAAACTTCCT
TCCACCCTCTTATTGTATGTAAATAGCCCGTTGATAGTTTGTAAATAAAACAACCAACAA
AATCAAAAAAAAAAAAAAGGCCACATGTGCT

consensusID : consensus_9688#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 719
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGT--CCGAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGTAGGGCGGGGGAAGGGAGACCGATGGGCGTTAGGAGGTCCACGCAGGTCCCCGTAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCACTGCCA]

[+] EMBL BM632940             [CCGCCCACGCGTCCGCCCACGCGT  CCGAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGTAGGGCGGGGGAAGGGAGACCGATGGGCGTTAGGAGGTCCACGCAGGTCCCCGTAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCACTGCCA]
[+] EMBL BM597503             [            CCGCGGACGCGTGGGCAAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGG                                                                                                                              ]
[+] EMBL BM618909             [                          CCGAGCCACAACACCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGTAGGGCGGGGGAAGGGAGACCGATGGGCGTTAGGAGGTCCACGCAGGTCCCCGTAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAG                       ]
[+] EMBL BX616858             [                                                 GCTCGCACAGCACAAACCACACACAACTTCAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGTAGGGCGGGGGAAGGGAGACCGATGGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCGTCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCAT                 ]
[+] EMBL BX610592             [                                                                                                          GCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAAGAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCAT                                                                                                                                                                                                                                                                                 ]




>consensus_9688#1
CCGCCCACGCGTCCGCCCACGCGTCCGAGCCACAACACCACTGCTCTGCTCGCACAGCAC
AAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCCGTCGCT
GCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAAC
CCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGC
GGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAG
TACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCC
GTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCG
CCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGC
GGCAAGAAGTAAGGCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACACAGTCA
GTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGTAGGGCG
GGGGAAGGGAGACCGATGGGCGTTAGGAGGTCCACGCAGGTCCCCGTAACCCCGTCGCCA
GGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCACTGCCA

consensusID : consensus_9688#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 638
fasta sequence

                              [CCGCCCACGCGTCCGCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGTAGAGCGGGGGAAGGGAGACCGATGGGCGTTAGGAAGTCCACGCAGGTCCCCGCAACCCCGTCGCCAG]

[+] EMBL BM634448             [CCGCCCACGCGTCCGCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGTAGAGCGGGGGAAGGGAGACCGATGGGCGTTAGGAAGTCCACGCAGGTCCCCGCAACCCCGTCGCCAG]




>consensus_9688#2
CCGCCCACGCGTCCGCACTGCTCTGCTCGCACAGCACAAACCACACACAACAACAATGTA
CAAGCTGTTCGTTATTGCCGCGCTGGTGGCCGTCGCTGCCGCCCAGAACCCGCAGGACGC
TCAGGCCCAGGTGCTCGCGTCCGACTCGGTCGTCAACCCGGACGGCTCGTACAACTATCG
CTACGAGACGAGCAACGGACTGGCGGCGCAGGAGAGCGGCGTCGGTGGCCAGTCGGCCCA
GGGCAGCTACTCGTACACCGGTGACGATGGCGTCCAGTACCAGGTGTCGTACGTGGCCGA
CGAGAACGGATTCCAGCCGCAGGGTGCCCATCTGCCCGTCGATGGTCCCGCTCCCGACCA
CGTCCTGAAGACGCTCGAGCAGATCCGCGCCAACCCGCCGCGTGACGACCCCAACTTCAG
CATGGATGCGCTGAACGCTGCCATCGCTCGGCTGAGCGGCAAGAAGTAAGGCGGAGGGCG
TTGATAGTAGCAGCTGAAGACCGTGCCAACACAGTCAGTCTACTTAAGCACACCTGACAC
ATACTCCACTAGTGCACCAACCTGCCTGGGTAGAGCGGGGGAAGGGAGACCGATGGGCGT
TAGGAAGTCCACGCAGGTCCCCGCAACCCCGTCGCCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9688#1      ------CCGCCCACGCGTCCGCCCACGCGTCCGAGCCACAACACCACTGCTCTGCTCGCA 54
consensus_9688#2      ------------------CCGCCCACGCGTCCG-----------CACTGCTCTGCTCGCA 31
consensus_9688#0      GGATATCATCCCTCGCATTAGCTTTTAT---CAAGCCACAACACCACTGCTCTGCTCGCA 57
                                          **         *            ****************

consensus_9688#1      CAGCACAAACCACACACAACAACAATGTACAAGCTGTTTGTTATTGCCGCGCTGGTGGCC 114
consensus_9688#2      CAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCC 91
consensus_9688#0      CAGCACAAACCACACACAACAACAATGTACAAGCTGTTCGTTATTGCCGCGCTGGTGGCC 117
                      ************************************** *********************

consensus_9688#1      GTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTC 174
consensus_9688#2      GTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTC 151
consensus_9688#0      GTCGCTGCCGCCCAGAACCCGCAGGACGCTCAGGCCCAGGTGCTCGCGTCCGACTCGGTC 177
                      ************************************************************

consensus_9688#1      GTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAG 234
consensus_9688#2      GTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAG 211
consensus_9688#0      GTCAACCCGGACGGCTCGTACAACTATCGCTACGAGACGAGCAACGGACTGGCGGCGCAG 237
                      ************************************************************

consensus_9688#1      GAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGC 294
consensus_9688#2      GAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGC 271
consensus_9688#0      GAGAGCGGCGTCGGTGGCCAGTCGGCCCAGGGCAGCTACTCGTACACCGGTGACGATGGC 297
                      ************************************************************

consensus_9688#1      GTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCAT 354
consensus_9688#2      GTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCAT 331
consensus_9688#0      GTCCAGTACCAGGTGTCGTACGTGGCCGACGAGAACGGATTCCAGCCGCAGGGTGCCCAT 357
                      ************************************************************

consensus_9688#1      CTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCC 414
consensus_9688#2      CTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCC 391
consensus_9688#0      CTGCCCGTCGATGGTCCCGCTCCCGACCACGTCCTGAAGACGCTCGAGCAGATCCGCGCC 417
                      ************************************************************

consensus_9688#1      AACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGG 474
consensus_9688#2      AACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGG 451
consensus_9688#0      AACCCGCCGCGTGACGACCCCAACTTCAGCATGGATGCGCTGAACGCTGCCATCGCTCGG 477
                      ************************************************************

consensus_9688#1      CTGAGCGGCAAGAAGTAAGGCGGTGGGCGTTGATGGTAGCAGCTGAAGACCGTGCCAACA 534
consensus_9688#2      CTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACA 511
consensus_9688#0      CTGAGCGGCAAGAAGTAAGGCGGAGGGCGTTGATAGTAGCAGCTGAAGACCGTGCCAACA 537
                      *********************** ********** *************************

consensus_9688#1      CAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGT 594
consensus_9688#2      CAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGT 571
consensus_9688#0      CAGTCAGTCTACTTAAGCACACCTGACACATACTCCACTAGTGCACCAACCTGCCTGGGT 597
                      ************************************************************

consensus_9688#1      AGGGCGGGGGAAGGGAGACCGATGGGCGTTAGGAGGTCCACGCAGGTCCCCGTAACCCCG 654
consensus_9688#2      AGAGCGGGGGAAGGGAGACCGATGGGCGTTAGGAAGTCCACGCAGGTCCCCGCAACCCCG 631
consensus_9688#0      AGGGCGGGGGAAGGGAGACCGATGGGCGTTAGGAGGTCCACGCAGGTCCCCGCAACCCCG 657
                      ** ******************************* ***************** *******

consensus_9688#1      TCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCAC 714
consensus_9688#2      TCGCCAG----------------------------------------------------- 638
consensus_9688#0      TCGCCAGGAGCTGGCCAACTTCGAACAAAGATCTACTTCAAGGGGCATCCAAACCGTCAC 717
                      *******                                                     

consensus_9688#1      TGCCA------------------------------------------------------- 719
consensus_9688#2      ------------------------------------------------------------
consensus_9688#0      TGCCATCCTTAGACAATATTTTCTACTTCCTCCTCATCTTCTTCTATCCAAACTTTTTCA 777
                                                                                  

consensus_9688#1      ------------------------------------------------------------
consensus_9688#2      ------------------------------------------------------------
consensus_9688#0      TTTAACTGGTTCCAAAAGCGTTTCTTAAATTATGATGTTCTATTTCCGTCAAACAAACTT 837
                                                                                  

consensus_9688#1      ------------------------------------------------------------
consensus_9688#2      ------------------------------------------------------------
consensus_9688#0      CCTTCCACCCTCTTATTGTATGTAAATAGCCCGTTGATAGTTTGTAAATAAAACAACCAA 897
                                                                                  

consensus_9688#1      ----------------------------------
consensus_9688#2      ----------------------------------
consensus_9688#0      CAAAATCAAAAAAAAAAAAAAGGCCACATGTGCT 931