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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9690#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 2077 fasta sequence
[CCCCGCAGGTTAGCGGCATCGAAGGGCTCGACGTGCAGCAGCAGCAGCAGCAGTACCCCA-GACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA-GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC-ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG-TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC-TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC-GGGCCGACCT-GCCCAACCC-GGACGATGTGCG-CGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCT-CCCTGTCTAAAAAAAAGTGTGTGTCTGTGTTGGATTATATCCTATACGGTCATTACTGTCAGGCGACTTGCTACTCGTGCTGTTTCGAGATACAACATGGCCGCCATACTAAATCCACTTCGCTTCCTTCTGCTCGGCCGGTGACGAGGACAGTAACCGTCTCGTCTCGGTATCCGAATCCTGTTCCTGCTCATCATCCTGAGCGCGCGCCTCGTAGTGGGTCGGCCGGTGCGCCGGAGTGTTCGGTGCCGTTCCGCCAGCCGGTTGCGGTTGCGCACGCTTCACTCGGTTCGGGCTGCTCGGTGTGGCGTCGAGCAGCGCGTACGGCACGTGACAGTTGCGGTCGGAAAAGGCGGGAAAGTACTGACGGTAGCAGAGATAGGACAGCACGATCCCGATCAGCGAACCGACCGTCACGTCCTGCCAGTGGTGATGGTAGTCGCACGTTCGGCTGATCGCGATCATGGTCGCGGCAAACAGGGGCAACCCGGCGGCAATCACGCGCACCGATCGGCCCCGGCCCCG-TTCGTTCATCAGGTGCAGCTTGCCGATAAGCGGCCAGGTCAGGAAGCCGAGCCCAACAAAGGCGAGGGAGGAATGGCCGGATGGGAAGCTC-TGCGCCCCGTCTATCAGTGCCCGCATATCCTTCCCGGTGCAGTGCAGCTCG-TCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCC-GCGGGCGGCCTACCGCAA-TCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCGCGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCACGAGAGCGGTCCTGGTCCGAAGCGTGCGGACGCGTGGGCGG]
[+] EMBL AL933541 [CCCCGCAGGTTAGCGGCATCGAAGGGCTCGACGTGCAGCAGCAGCAGCAGCAGTACCCCA GACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAA ]
[+] EMBL BX619853 [ atnCGGCA CGA GG CGACGTGCAGCAGCAGCAGCAGCAGTACCCCAGGACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGNTGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAAGGAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAANGNNCTGCCCTGGTGCCTTGGCAANGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGANNT GCCCAACCC GGACGATGTGCG CG ]
[+] EMBL BX619932 [ ATCGAAGGGCTCGACGTGCAGCAGCAGCAGCAGCAGTACCCCA GACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATCNATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACG CCGGCCGAANNGACTG CCTGGTG CTGGGCAANNGGTNCGACACGTCCCCGCNGGTCAGCGCGCTGGTGCAGCGGGGCCGACCTGGCCCAACCCNGGACGATGTGCGNCGTCTGGg ]
[+] EMBL BM591329 [ CCGCCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GGACGATGTGCG CGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGAC ]
[+] EMBL BX618978 [ TCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGA ATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GGACGATGTGCG CGTCTGGTGCGAGGTGAACGGTGTG ]
[+] EMBL BX610889 [ CGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGA ATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GGACGATGTGCG CGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAA ]
[+] EMBL AGA285363 [ TCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAAACAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACGGTCTCGCGCTCGACATGACCGGGATGGAC T ]
[+] EMBL AGA285470 [ AAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACGTTCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGACTTTTATACTGGACGCCCGGCCGAAGGGACTGGCC ]
[+] EMBL BM584917 [ TCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGAGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GG ]
[-] EMBL AGA284174 [ TGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GGACGATGTGCG CGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCT CCCTGTCTAAAAAAAA ]
[-] EMBL AGA284067 [ CGATGTGCG CGTCTGGTGCGAGATGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCT CCCTGTCAAAAAAAA ]
[-] EMBL BM583530 [ GGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCTGCCCTGTCTATGTGTGTGTGTGTGTCTGTGTTGGATTATATCCTATACGGTCATTACTGTCAGGCGACTTGCTACTCGTGCTGTTTCGAGATACAACATGGCCGCCATACTAAATCCACTTCGCTTCCTTCTGCTCGGCCGGTGACGAGGACAGTAACCGTCTCGTCTCGGTATCCGAATCCTGTTCCTGCTCATCATCCTGAGCGCGCGCCTCGTAGTGGGTCGGCCGGTGCGCCGGAGTGTTCGGTGCCGTTCCGCCAGCCGGTTGCGGTTGCGCACGCTTCACTCGGTTCGGGCTGCTCGGTGTGGCGTCGAGCAGCGCGTACGGCACGTGACAGTTGCGGTCGGAAAAGGCGGGAAAGTACTGACGGTAGCAGAGATAGGACAGCACGATCCCGATCAGCGAACCGACCGTCACGTCCTGCCAGTGGTGATGGTAGTCGCACGTTCGGCTGATCGCGATCATGGTCGCGGCAAACAGGGGCAACCCGGCGGCAATCACGCGCACCGATCGGCCCCGGCCCCG TTCGTTCATCAGGTGCAGCTTGCCGATAAGCGG ]
[-] EMBL BX604596 [ CCGATCGGCCCCGGCCCCGTTTCGTTCATCAGGTGCAGCTTGCCGATAAGGTACCAGGTCAGGAAGCCGAGCCCAACAAAGGCGAGGGAGGAATGGCCGGATGGGAAGCTC TGCGCCCCGTCTATCAGTGCCCGCATATCCTTCCCGGTGCAGTGCAGCTCG TCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCC GCGGGCGGCCTACCGCAA TCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGATACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCACGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCACGAG ]
[-] EMBL BM645873 [ GCCGAGCCCAACAAAGGCGAAGGAGGAATGGCCGGATGGGAAGCTCTTGCG CCCGTCTATCAGTGCGCGCATGTCCTTCCCGGTGCAGTGCAGCTCG TCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCC GCGGGCGGCCTACCGCAA TCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCGCGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGTAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGCGGACGCGTGGGCGG ]
[-] EMBL BM596155 [ ATCAGTGCCCGCATATCCTTCCCGGTGCAGTGCAGCTTGTTGGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCCGGCGGGCGGCCTACCGCAATTCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGATACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCACGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCACGAGAGCGG ]
[-] EMBL BM579694 [ GTGCAGTGCAGCTCG TCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCC GCGGGCGGCCTACCGCAA TCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGATAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCGCGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCACGAGAGGCGTCCTGGTCCGAAGCGTGCGGACGCGTGGGCGG]
[-] EMBL BM618130 [ GCGTGAATGCCAGCCCCGGCACTCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCGCGTGG ]
consensusID : consensus_9690#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence
[ACATGTGTATGTATAGGTGTGTTTGCGTGTGCTAGCATACTTCATATTTCCCCCCTCTCTTTCGTGTATGCGGTCGATCGTACCATCTCCTAATTGATACACGGCGTAGTAACACAACAGCTGACGATTCACGGCAATCGAAGGGCTCGACGTGCAGCAGCAGTACCCCAGCAGTAGTACCCCAGACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAAGAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACT]
[+] EMBL BX626213 [ACATGTGTATGTATAGGTGTGTTTGCGTGTGCTAGCATACTTCATATTTCCCCCCTCTCTTTCGTGTATGCGGTCGATCGTACCATCTCCTAATTGATACACGGCGTAGTAACACAACAGCTGACGATTCACGGCAATCGAAGGGCTCGACGTGCAGCAGCAGTACCCCAGCAGTAGTACCCCAGACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAAGAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACT]
consensusID : consensus_9690#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence
[AGAATCGCCACGAGGTGTAAGAAAGCAGCACTGCTCGGTGNCGTAATCAATTGGGGAGCATACTTTATATTTCCCCCCTCTCTTTCGTGTATGCGGTCGATCGTACCATCGTCCTAATTGATACACGGCGTAGTAACACAACAGCTGACGATTCGCGGCAATCGAAGGGCTCGACGTGCAGCAGACAGCAGCAGCGAGTACCCCAGACGCCCACCGAACGGGCGATGACTACGCGCGNCTCCGTCCAAGAGTGCCGACCACGGTCCAAGGTTCTTGCAAATCGGAGCCCGGAAAATTATCGGTGCTGGCGGTAAACTACAAGAGAACATTTTGCGCCTCACAAGAGCT]
[+] EMBL BX469301 [AGAATCGCCACGAGGTGTAAGAAAGCAGCACTGCTCGGTGNCGTAATCAATTGGGGAGCATACTTTATATTTCCCCCCTCTCTTTCGTGTATGCGGTCGATCGTACCATCGTCCTAATTGATACACGGCGTAGTAACACAACAGCTGACGATTCGCGGCAATCGAAGGGCTCGACGTGCAGCAGACAGCAGCAGCGAGTACCCCAGACGCCCACCGAACGGGCGATGACTACGCGCGNCTCCGTCCAAGAGTGCCGACCACGGTCCAAGGTTCTTGCAAATCGGAGCCCGGAAAATTATCGGTGCTGGCGGTAAACTACAAGAGAACATTTTGCGCCTCACAAGAGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 CCCCGCAGGTTAGCGGCATCGAAGGGCTCGACGTGCAGCAGCAGCAGCAGCAGTACCCCA 60
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTT 120
consensus_9690#1 -------------------------------------------------ACATGTGTATG 11
consensus_9690#2 -------------------------AGAATCGCCACGAGGTGTAAGAAAGCAGCACTGCT 35
consensus_9690#0 CTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAAGAAATTTTGCGCCT 180
consensus_9690#1 TATAGGTGTGTTTGCGTGTGCTAGCATACTTCATATTTCCC----CCCTCTCTTTCGTGT 67
consensus_9690#2 CGGTGNCGTAATCAATTGGGG-AGCATACTTTATATTTCCC----CCCTCTCTTTCGTGT 90
consensus_9690#0 CACAAACTCCCCCAAGCCGGA-TGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGC 239
* *** * * ** ** * ** **** * * **
consensus_9690#1 ---ATGCGGTCGATCGTACCATC-TCCTAATTGATACACGGCGTAGTAACACAACAGCTG 123
consensus_9690#2 ---ATGCGGTCGATCGTACCATCGTCCTAATTGATACACGGCGTAGTAACACAACAGCTG 147
consensus_9690#0 TGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGC-CAACCATCCGCATCCCG 298
* **** * * * * * * * * ** * ** * * * * *
consensus_9690#1 ACGATTCACGGCAATCGAA--GGGCTCGACGTGCAGCAGCAGTACCCCAGCAGT-AGTAC 180
consensus_9690#2 ACGATTCGCGGCAATCGAA--GGGCTCGACGTGCAGCAG----ACAGCAGCAGCGAGTAC 201
consensus_9690#0 CGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATCATCGGGCGGCGC 358
* **** ** **** * *** * * ** * * * *
consensus_9690#1 CCC----AGAC-CCCACCGAACGGGCGA-GAC--ACGCGCGC-TCCGTCCAAGA-TGCCG 230
consensus_9690#2 CCC----AGACGCCCACCGAACGGGCGATGACT-ACGCGCGNCTCCGTCCAAGAGTGCCG 256
consensus_9690#0 TGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACGTCGGTGGCTACTGTCTCGCGCTC 418
* * ******** * ***** * * *** * * **
consensus_9690#1 ACCACG-TC--CAAG-TTCTTGCAA-TCGA--CCCGGA-AAATTATCGGTGCTGGCG-TA 281
consensus_9690#2 ACCACGGTC--CAAGGTTCTTGCAAATCGGAGCCCGGA-AAATTATCGGTGCTGGCGGTA 313
consensus_9690#0 GACATGACCGGCATGGACTTTATAC-TGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCT 477
** * * ** * ** * * * ***** ** * * **** *
consensus_9690#1 AACTACAAAG---AAA--TTTTGCGCCTCACAA-ACTCCCCCAAGCCGGATGCACCCGTC 335
consensus_9690#2 AACTACAAGA---GAACATTTTGCGCCTCACAA-GAGCT--------------------- 348
consensus_9690#0 TGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGCGGGCCGACCTGCC 537
* * * **** ** *
consensus_9690#1 ATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACT--------- 386
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 CAACCCGGACGATGTGCGCGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAG 597
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 TACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGAC 657
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCA 717
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 CGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGC 777
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 TGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCTC 837
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 CCTGTCTAAAAAAAAGTGTGTGTCTGTGTTGGATTATATCCTATACGGTCATTACTGTCA 897
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GGCGACTTGCTACTCGTGCTGTTTCGAGATACAACATGGCCGCCATACTAAATCCACTTC 957
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GCTTCCTTCTGCTCGGCCGGTGACGAGGACAGTAACCGTCTCGTCTCGGTATCCGAATCC 1017
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 TGTTCCTGCTCATCATCCTGAGCGCGCGCCTCGTAGTGGGTCGGCCGGTGCGCCGGAGTG 1077
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 TTCGGTGCCGTTCCGCCAGCCGGTTGCGGTTGCGCACGCTTCACTCGGTTCGGGCTGCTC 1137
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GGTGTGGCGTCGAGCAGCGCGTACGGCACGTGACAGTTGCGGTCGGAAAAGGCGGGAAAG 1197
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 TACTGACGGTAGCAGAGATAGGACAGCACGATCCCGATCAGCGAACCGACCGTCACGTCC 1257
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 TGCCAGTGGTGATGGTAGTCGCACGTTCGGCTGATCGCGATCATGGTCGCGGCAAACAGG 1317
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GGCAACCCGGCGGCAATCACGCGCACCGATCGGCCCCGGCCCCGTTCGTTCATCAGGTGC 1377
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 AGCTTGCCGATAAGCGGCCAGGTCAGGAAGCCGAGCCCAACAAAGGCGAGGGAGGAATGG 1437
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 CCGGATGGGAAGCTCTGCGCCCCGTCTATCAGTGCCCGCATATCCTTCCCGGTGCAGTGC 1497
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 AGCTCGTCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCCGCGGGCGG 1557
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 CCTACCGCAATCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAG 1617
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAAT 1677
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCC 1737
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCC 1797
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 TTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGC 1857
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 AGGTTGTATTCCGGGGCGCGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTAC 1917
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 GCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACA 1977
consensus_9690#1 ------------------------------------------------------------
consensus_9690#2 ------------------------------------------------------------
consensus_9690#0 CACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCAC 2037
consensus_9690#1 ----------------------------------------
consensus_9690#2 ----------------------------------------
consensus_9690#0 GAGAGCGGTCCTGGTCCGAAGCGTGCGGACGCGTGGGCGG 2077
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||