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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9692#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 956 fasta sequence
[CTGTTGGCCTACAGGAAAATTGCATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG-ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG-TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG----GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG-AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG-GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG-TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA-ACA-TTTTGGTCAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGC]
[-] EMBL CNS09DQS [CTGTTGGCCTACAGGAAAATTGCATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTG TGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGT GAGGCA TTTTGtccacac ]
[+] EMBL CNS09CM6 [ gcAAATTGCATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAGACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCCGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTCGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA ACATTTTTGGTCTAAAAAAAAAA ]
[+] EMBL CNS093BU [ TTGAAAAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGATG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCGAAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGAAAAAGCTGTCGA A A AAAAAAAAAAAAAAAAAAAAAAAAGGCC ]
[-] EMBL CNS09CM7 [ ATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAGACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCCGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTTTGTGCCGACACGGTCAAAACACTCAAGGACAAGCGGGAGGAAAACAAGGACGAACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTG TAACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGC ]
[+] EMBL CNS09DQR [ tccAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGCTTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA ACA TTTTGGTCCAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGC]
[+] EMBL CNS09JBE [ ATTGTTGTATTTTTGATCAATTTTTAACAGAAAAGCCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGCTTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA ACA TTTTGGTATAAAAAAAAAAAAAAAaaag ]
[+] EMBL AGA285048 [ CAATCTACACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCACAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCCGAGCTGAGCGTCGAGGACATTATTCGGGAACGGACGCAAAAAACATTCCGCGAACG TTGTAGGCTATTTTTCCGTTTCGATTCGCTATAAAGCAGCGCATCG GNGAGAGA ]
[-] EMBL CNS09JBF [ CACACAGGGTTTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTTTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACGCACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTTGTTACGAACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGC ]
[+] EMBL AL931134 [ cgccgaggnGACGGAATCGTTC AAGGTCAGGTCGATGCTGAAGC AAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGATACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTA ]
[-] EMBL AGA283758 [ TATTCGGGAACGGACGCAAAAAACATTCCGCGAACG TTGTAGGCTATTTTTCCGTTTCGATTCGCTATAAAGCAGCGCATCGGAGAGAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACGAATGCAGTGGTGGTGCATCGCTGACGCACTCGAGTTCGAAGCGCACCAGCA AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG ATAAATGGTTGAGGAAAAAAGGGGCGAGATATTCTGGCACTTG TTATCACAGCAGGTGTTTTTACAAAGATTTTAAGTAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTCCGCAAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA Aaaaaaa ]
[-] EMBL AGA281484 [ AAACATTCCGCGGACG TTGTAGGCTATTTTTCCGTTTCGATTCGCTATAAAGCAGCGCATCGGAGAGAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACGAATGCAGTGGTGGTGCATCGCTGACGCACTCGAGTTCGAAGCGCACCAGCA AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATGAGTAAATGGTTGAGGAAAAAAGGGGCGAGATATTCTGGCACTTGTTGATCACAGCAGGTGTTTTTACAAAGATTTTAAGTAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTCCGCAAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA Aaaaaaaa ]
[-] EMBL CNS093BV [ G AAGAAGCAGCAGCATTTATACCTGAGTGGCCCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTT ]
consensusID : consensus_9692#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 723 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCGCACGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAACCACCCCGACAATCTCCACCGCATCACACAGAATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACGACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCCGAGCTGAGCGTGGAAGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGTTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAATCCGTCGGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCGAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATGGTAAAGGGTTGAGGAAAAAAGGGG]
[+] EMBL BM608107 [CCGCCCACGCGTCCGCCCACGCGTCCGCGCACGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAACCACCCCGACAATCTCCACCGCATCACACAGAATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACGACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCCGAGCTGAGCGTGGAAGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGTTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAATCCGTCGGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCGAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATGGTAAAGGGTTGAGGAAAAAAGGGG]
[+] EMBL AGA283081 [ ATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACGACGTTGCACTGAACAAGCAGTTCAAAACGGAACAG ]
consensusID : consensus_9692#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 659 fasta sequence
[GACGCGCCAGGAGAAGGGCATCTTCCGGCCGGACATGATCGAGCTGTTGAGGCAGGCGAAGAAGGGCAGTTTGAAGCACCAGCAGGCAGAGGAACCAAGGACGGACAGTGAAACCGGGGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGGGGCGGCGTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATTGCGCAGGCGTTCATCTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTAAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCATGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACGCTCCGACGGTGGCCCATCGCAACGGTGCTGAATCGCGAGTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGTCGTGGGCATCCATTTCGACCCGAAGTACTTCCCCGAGCCGGAGCGTTTCGATCCCGAACGGTTCAGTGCGGCCAATCGGAACAACATCCAACCGGGGTACGTACCTACCGTTCGGTGCTGGACCACGCAATTGC]
[+] EMBL BX610320 [GACGCGCCAGGAGAAGGGCATCTTCCGGCCGGACATGATCGAGCTGTTGAGGCAGGCGAAGAAGGGCAGTTTGAAGCACCAGCAGGCAGAGGAACCAAGGACGGACAGTGAAACCGGGGAAGGGTTTGCGACCGCCGAGGAGTCGCACGTGGGGCGGCGGGCGCACGATCGCGTCGGGACG ]
[+] EMBL BX609474 [ AGGCAGAGGAACCAAGGACGGACAGTGAAACCGGGGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGGGGCGGCGTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATTGCGCAGGCGTTCATCTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTAAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCATGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACGCTCCGACGGTGGCCCATCGCAACGGTGCTGAATCGCGAGTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGTCGTGGGCATCCATTTCGACCCGA ]
[+] EMBL BX616044 [ GGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGGGGCGGCGTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATTGCGCAGGCGTTCATCTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTAAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACTCTCACGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACGCTCCGACGGTGGCCCATCGCAACGGTGCTGAATCGCGAGTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGTCGTGGGCATCCATTTCGACCCGAAGTACTTCCCCGAGCCGGAGCGTTTCGATCCCGAACGGTTCAGTGCGGCCAATCGGAACAACATCCAACCGGGGTACGTACCTACCGTTCGGTGCTGGACCACGCAATTGC]
consensusID : consensus_9692#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence
[AGAATNGCCACGGTNATTTGAAGCACAGCAGGCAGCAGGAACAATAACGGACAGTGAAACCTGGGGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGTGGTGCGGCCTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATAGCGCAGTGCCTTCATTTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTGAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCACGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACCGCTCCGACGGTGGCCCCATCGCAACGGTGCTGAATCGCGAGTTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGGTCGTGGGCATTCCATTTTCCGACCGAAGGTACTTCCCCGAGACCGGANNCCGGTTATCCGGATTCCCCGGAACGGGTTCANGGTGGC]
[+] EMBL AL695752 [AGAATNGCCACGGTNATTTGAAGCACAGCAGGCAGCAGGAACAATAACGGACAGTGAAACCTGGGGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGTGGTGCGGCCTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATAGCGCAGTGCCTTCATTTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTGAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCACGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACCGCTCCGACGGTGGCCCCATCGCAACGGTGCTGAATCGCGAGTTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGGTCGTGGGCATTCCATTTTCCGACCGAAGGTACTTCCCCGAGACCGGANNCCGGTTATCCGGATTCCCCGGAACGGGTTCANGGTGGC]
consensusID : consensus_9692#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 125 fasta sequence
[CAGCTATTACGCTTATACTACAATAAACAACATTATATAACATGTTTGATGTGTTTGCGGACAATCGGAACAACATCCAACCGGGTACGTACCTACCGTTCGGTGCTGGACCACGCAATTGCATT]
[+] EMBL AGA283034 [CAGCTATTACGCTTATACTACAATAAACAACATTATATAACATGTTTGATGTGTTTGCGGACAATCGGAACAACATCCAACCGGGTACGTACCTACCGTTCGGTGCTGGACCACGCAATTGCATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9692#2 --GACGCGCCAGGAGAAGGGCATCTTCCGGCCGGACATGATCGAGCTGTTGAGGCAGGCG 58
consensus_9692#3 -------------------------------------------------------AGAAT 5
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 CTGTTGGCCTACAGGAAAATTGCATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTT 60
consensus_9692#1 ----CCGCCCACGCGTCCGCC-CAC-GCGTCCGCGCACGCTTCTGTTATTGTTGTATTTT 54
consensus_9692#2 AAGAAGGGCAGTTTGAAGCACCAGCAGGCAGAGGAACCAAGGACGGACAGTGAAACC-GG 117
consensus_9692#3 NGCCACGGTNATTTGAAGCAC-AGCAGGCAGCAGGAACAATAACGGACAGTGAAACCTGG 64
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 TGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCA 120
consensus_9692#1 TGATCAATTTTTAACAGAAAAACCACCGCAAAAACCACCCCGACAATCTCCACCGCATCA 114
consensus_9692#2 GGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGGGG--CGGCGTGCGCACGATCGC-GT 174
consensus_9692#3 GGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGTGGTGCGGCCTGCGCACGATCGC-GT 123
consensus_9692#4 -----------------------------------------------CAGCTATTAC-GC 12
consensus_9692#0 CACAGGATCTGTAGCAAT----GAGTTTCAAGTATGA---GTGTGCCGATTTCTCGCAGT 173
consensus_9692#1 CACAGAATCTGTAGCAAT----GAGTTTCAAGTATGA---GTGTGCCGATTTCTCGCAGT 167
* * *
consensus_9692#2 CTGGACGGACACGGAGCTGATTGCGCAG-GCGTTCATCTTCTTCTTCGCCGGGTTCGAAA 233
consensus_9692#3 CTGGACGGACACGGAGCTGATAGCGCAGTGCCTTCATTTTCTTCTTCGCCGGGTTCGAAA 183
consensus_9692#4 TTATACTACAATAAACAACATTATATAACATGTTTGATGTGTTTGCGGACAA--TCGGAA 70
consensus_9692#0 TTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACA 233
consensus_9692#1 TTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACA 227
* * * * * * *
consensus_9692#2 CCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTAAATGAGGACATTCAGG 293
consensus_9692#3 CCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTGAATGAGGACATTCAGG 243
consensus_9692#4 CAACATCCAACCGGGTA-CGTACCTACCGTTCGGTGCTGGACCACGCAATTGCATT---- 125
consensus_9692#0 CAACCATACCGACGGAATCGTTCAAA--GGTCAGGTCGATGCTGAAGCAAAGTGTCGCGA 291
consensus_9692#1 CAACCATACCGACGGAATCGTTCAAA--GGTCAGGTCGATGCTGAAGCAAAGTGTCGCGA 285
* * * * *** * * * *
consensus_9692#2 CCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCA 353
consensus_9692#3 CCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCA 303
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 CCTGCACGGACAGCTAGAATCGGGCTACAGC-CACCGGCAGGAAGCGATCAAGAAGTGTA 350
consensus_9692#1 CCTGCACGGACAGCTAGAATCGGGCTACAGC-CACCGGCAGGAAGCGATCAAGAAGTGTA 344
consensus_9692#2 TGTACGAACA-GCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAAC-GCTCCG 411
consensus_9692#3 CGTACGAACA-GCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACCGCTCCG 362
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 TCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG 410
consensus_9692#1 TCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACG 404
consensus_9692#2 ACGGTGGCCC-ATCGCAACGGTGCTGAATCGCGAGT-GCGTCCGGAACTATCAGTACGAC 469
consensus_9692#3 ACGGTGGCCCCATCGCAACGGTGCTGAATCGCGAGTTGCGTCCGGAACTATCAGTACGAC 422
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 ACGTTGCACTGAACA-AGCAGTTCAAAACGG--AACAGCGAAAGCTACGATTGCTGCAAT 467
consensus_9692#1 ACGTTGCACTGAACA-AGCAGTTCAAAACGG--AACAGCGAAAGCTACGATTGCTGCAAT 461
consensus_9692#2 GATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGG-TCGT 528
consensus_9692#3 GATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGGTCGT 482
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 C-TGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGT 526
consensus_9692#1 C-CGAGCTGAGCGTGGAAGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGT 520
consensus_9692#2 GGGCAT-CCATTT--CGACCCGAAGTACTTCCCCGAGCCGGAGCGTTTCGATCCCGAACG 585
consensus_9692#3 GGGCATTCCATTTTCCGACCGAAGGTACTTCCCCGAGACCGGANNCCGGTTATCCGGATT 542
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 TGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCGGAGAGAGAGAGAGAG 586
consensus_9692#1 TGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAATCCGTCGGAGAGAGAGAG---- 576
consensus_9692#2 GTTCAGTGCGGCCAATCGGAACAACATCCAACCGGGGTACGTACCTACCGTTCGGTGCTG 645
consensus_9692#3 CCCCGGAACGGGT--TCANGGTGGC----------------------------------- 565
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 GTTCTAGAAGGCT--CTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACG 644
consensus_9692#1 GTTCTAGAAGGCT--CTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACG 634
consensus_9692#2 GACCACGCAATTGC---------------------------------------------- 659
consensus_9692#3 ------------------------------------------------------------
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 CACTCGTGTTCGAAGCGCACCAGCGAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATT 704
consensus_9692#1 CACTCGTGTTCGAAGCGCACCAGCGAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATT 694
consensus_9692#2 ------------------------------------------------------------
consensus_9692#3 ------------------------------------------------------------
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 TAATGGTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTGTGATCACAGCAG 764
consensus_9692#1 TAATGGTAAAGGGTTGAGGAAAAAAGGGG------------------------------- 723
consensus_9692#2 ------------------------------------------------------------
consensus_9692#3 ------------------------------------------------------------
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 GTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTC 824
consensus_9692#1 ------------------------------------------------------------
consensus_9692#2 ------------------------------------------------------------
consensus_9692#3 ------------------------------------------------------------
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 CGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTT 884
consensus_9692#1 ------------------------------------------------------------
consensus_9692#2 ------------------------------------------------------------
consensus_9692#3 ------------------------------------------------------------
consensus_9692#4 ------------------------------------------------------------
consensus_9692#0 ATTGTAGTAAAGCGTAATAGCTGTCGAACATTTTGGTCAAAAAAAAAAAAAAAAGGCCAC 944
consensus_9692#1 ------------------------------------------------------------
consensus_9692#2 ------------
consensus_9692#3 ------------
consensus_9692#4 ------------
consensus_9692#0 ATGTGCTCGAGC 956
consensus_9692#1 ------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||