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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9704#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1594 fasta sequence
[ATTTCAAACACACCGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG-CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAG-TGCGCAATCCCGCCCAGGAGGCGAAGCTG-TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG---------GCGGGGGGGGGGGG-TGGAGG-AGAGAGTGAAC--GTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG-A-AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCATACTCTGACGACGATGATCGGGTTTGCTTAATTTTACGAGCTCTTTGACTACTGACGCGACGTCCACGTGCATTTATTGCTGCGTAACTGGTGCAACGCTATTGAACAACATTTACAAAAGTGGGGGGGGGTGTCC-TTCCCATCCTACCTGCCCTTCTTATGGTACGCACTGCGCTTTGGTTCACTTTCCACCTCCTCCCGCTCCAGCTCATCGTCCGTTTCGTCCTGCTCGTCCTGCTCCATCTCGCGCCGGTACAGCTCCTGAAACACTTCGTACTCTTCCAGCGTAACGTACGCCACCTTCACCGCGAACCGCTTGTCGCTCGTGTCCGTAATCTGGTGCAGCGGAGGATTGCCCGTCGGTGTGCTTTTCTCCGCCTTGAGCGACCGCGGCTTAAACAGTCCCAGCCGCTCCAGGAACGTGTGCCGGCAGCGCAAATGGTCCANATCGTGCGCAAAGGCGCTGGATTTCACCACCTCCAGTACCTCGTGGCGCATCGCCTGCAGCANGTAGGCGATCTTTGCCTCCGTCA]
[+] EMBL AGA281395 [ATTTCAAACACGCCGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGC ]
[+] EMBL CNS08XMC [ ACCGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACAAACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGGGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAC TGCGCAATCCCGCCCAGGAGGCGAA CTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAGAGTAAAC GTGTGTTTTTTTTTAATTTTTTAACCGCGTGTATTTTTGGTTGCGTtt ]
[+] EMBL CNS0909J [ aaaaaGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACAAACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAC TGCGCAATCCCGCCCAGGAGGCGAA CTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAAATTAAAC GTTTTTTTTTTTTTAATTTTTTAACCcct ]
[+] EMBL BX627277 [ CGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCTTCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAA ]
[+] EMBL CNS08D26 [ CGGACAAAGTTCACGTCCCGCGACGTTGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACAAACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAC TGCGCAATCCCGCCCAGGAGGCGAA CTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAAAGTAAAC GTTTTTTTTTTTTTTATTTTTTAACCGCGTTTATTTTTGGTTGCGTTTTTCGAT ]
[+] EMBL CNS08RW5 [ GGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACAAACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGGGAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCAATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGGGGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAC TGCGCAATCCCGCCCAGGAGGCGAA CTGTTCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGA ]
[+] EMBL BM644517 [ ccgCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCTTCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAG ]
[+] EMBL BX605856 [ ACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCTTCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGA ]
[+] EMBL BM590644 [ ccgCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCACCCGTCGCTCCTGCGCTCCG CCACCTTGATTTCGCGTGTGATTCCGTTCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGTTGGCGGAGCTGCGCAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTA ]
[-] EMBL CNS0909K [ GTCGCACCGCCCGTTGCTCCTGCG TCCG CCAACTTGTTTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAAAACAAGAACAGCAAAATGGCAAAACGGGCGGCCGGCTTTTTCATATTTCGCCGACTGCGCGAACGTATCGAGTTTCTGATGCTGCAGGCATCGTACGGCCAGCATAACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGG GCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGAAATCGTGGACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTTGCTGGCGGAG TGCGAAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGAACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGGTGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAGAGTGAAC GTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATAAACACACATAGAAACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTGTATAAACTGTTCACTTTAAACCGAGCG ]
[+] EMBL BX611528 [ CCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCTTCGTACTGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCG ]
[-] EMBL CNS08XMD [ gTCCGCCCAACTTGTTTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAAAACAAGAACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTTTCTGATGCTGCAGGCATCGTACGGCCAGCATAACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGGGGACGATTATGCGACGG GCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAG TGCGCAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAGAGTGAAC GTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCA ]
[-] EMBL CNS08D27 [ CG CCCACTTGTTTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGAACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTTTCTGATGCTGCAGGCATCGTACGGCCAGCATAACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGG GCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAG TGCGCAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAGAGTGAAC GTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAA ]
[-] EMBL BM606348 [ AGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCCCCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACGCCGGGGGAAGGGGGGGGGGGGGGTTGGAGGAAGAGAGTGGAC CGTGTGTGTGTGT TTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCT ATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCATACTCTGA ]
[-] EMBL AGA283009 [ GGGGGGG TGGAGG AGAGTGTGGAC GTGTGTGTGTGTGT TTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCT ATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCATACTCTG ]
[-] EMBL CNS08RW6 [ AGAGTGAACGTGTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGACCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACAT ]
[+] EMBL CNS09DR0 [ ttttttttTTTCGATCGAG CCAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCATACTCTGACGACGATGATCGGGTTTGCTTAATTTTACGAGCTCTTTGACTACTGACGCGACGTCCACGTGCATTTATTGCTGCGTAACTGGTGCAACGCTATTGAACAACATTTACAAAAGTGGGGGGGGGTGTCC TTCCCATCCTACCTGCCCTTCTTATGGTACGCACTGCGCTTTGGTTCACTTTCCACCTCCTCCCGCTCCAGCTCATCGTCCGTTTCGTCCTGCTCGTCCTGCTCCATCTCGCGCCGGTACAGCTCCTGAAACACTTCGTACTCTTCCAGCGTAACGTACGCCACCTTCACCGCGAACCGCTTGTCGCTCGTGTCCGTAATCTGGTGCAGCGGAGGATTGCCCGTCGGTGTGCTTTTCTCCGCCTTGAGCGACCGCGGCTTAAACAGTCCCAGCCGCTCCAGGAACG ]
[+] EMBL BX621007 [ TATTGCTGCGTAACTGGTGCAACGCTATTGGACAACATTTAAATAAAAAAACGAAAGTCACCTTTCCCATCCTATCTGCCCTTCTTATGGTACGCACTGCGCTTTGGTTCACTTTCCACCTCCTCCCGCTCCAGCTCATCGTCCGTTTCGTCCTGCTCGTCCTGCTCCATCTCGCGCCGGTACAGCTCCTGAAACACTTCGTACTCTTCCAGCGTAACGTACGCCACCTTCACCGCGAACCGCTTGTCGCTCGTGTCCGTAATCTGGTGCAGCGGAGGATTGCCCGTCGGTGTGCTTTTCTCCGCCTTGAGCGACCGCGGCTTAAACAGTCCCAGCCGCTCCAGGAACGTGTGCCGGCAGCGCAAATGGTCCANATCGTGCGCAAAGGCGCTGGATTTCACCACCTCCAGTACCTCGTGGCGCATCGCCTGCAGCANGTAGGCGATCTTTGCCTCCGTCA]
consensusID : consensus_9704#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1482 fasta sequence
[GCAAGAATTGCCCGAGGGTTTCCTGCGACGTTGTTCCCCGTTCTGCGAAAGTGCACCTGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCTGCAGTAGAGATGTCGCACCTGCGCCGTCTGCTCCTGCNGCTCCGGCAACTTTGATTTCGCGTGGTAGATTCCCTGTGCCCCAAAAAAAGGACTAAACCAATTTGAAAACCACCAATGGGGACCAGGGCCAAAANAATTGGGTGCACAAACACACCTGTNGTGGCCGTGCCCCGGGCATTNTACCTTACAATTAATTTTCACGGCCCGAAACTTTGGCGGCCNGGAACACCGGTTANTTTCGGAAGGGTTAATTCCTTGGACATTTGCCTTGGCAAGGGGCTTATTACCGGACTAACCNGGTGGCCCCAAGGCAAATCCCAAACCTCTTTGGTGGGGTTACCCTGTCACCCAAACACCCCGGGACANACACTGGGGGGTTTCCCCAACGCGGTTTTCCGGGAAATTTCCCCTCGTGGGTGTGGNGATGGACAAGNGTGGGACACCCGGANAACTTTNACATTTGCTTGCAACAACCTCGAGTGGGGNCCCCCCCTTTGGGTATCNGNGTCGGGCACACTAATACACNGGTACANCCNCCTGGNANTGTGANAAAATGGCCCCGGGTGGACTATTTAAAACCTGGGTCCCACCGGAGAATACAACACNTGGTNTTTTTAGTAAACNCCCNTTTTANAACTAGACAGCAGGCCAATTTTTATCCCAAANTACCCCTCGGGGTAGACAACATNGGGCCGACAAAATACCAAGNGTTTAGGGCTCGACTGNGGCCCTTTCCCCGGCAAAGGTATCAAACACANAAACACACNGGTTTATGGAGACACACTNCTGTCGGCTAGNAGCCATACACGCNGGACAACGTGCACAACATGTGGGATTNGGGGAGGGTAACCCCCAGNGGATNATTACNNANAACGANCTTTCGTGGGAGCCGTCATTCNTTTGGCGGACATGCGGTCGAAAACGGNTCCACCTTTTTTGNGCACTGAGGCCCACCAANAAGAGTTTTACGCCCCACGCCNCCNGGGGAGAGAACCACCCCCAAAAGGGGTGGCNTAACGATGCAAACACCTAGCGTGCANAGAACAACGNGACCACTTTTGTGGGTATTACACCCCCGAGNGAACAAGCNTGGAGAAAGTGNGGGCNATACAACNCCCACAAAGCGNTGGCGAACAGCCCACTGTTTTGGTACAACAACTGCATTTCATGNGATGGCCACATNTTGGTGGATNAACCACACCCGTTATGGGGATCNGTGCACACANATTTGCGGCCAACACAANGATCNACCGCAGTCANATCAAGATATTCCGACACCNAANAATCANCAAAACATTAAATGNGCACCCTACGANATGCAGGA]
[+] EMBL AL693891 [GCAAGAATTGCCCGAGGGTTTCCTGCGACGTTGTTCCCCGTTCTGCGAAAGTGCACCTGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCTGCAGTAGAGATGTCGCACCTGCGCCGTCTGCTCCTGCNGCTCCGGCAACTTTGATTTCGCGTGGTAGATTCCCTGTGCCCCAAAAAAAGGACTAAACCAATTTGAAAACCACCAATGGGGACCAGGGCCAAAANAATTGGGTGCACAAACACACCTGTNGTGGCCGTGCCCCGGGCATTNTACCTTACAATTAATTTTCACGGCCCGAAACTTTGGCGGCCNGGAACACCGGTTANTTTCGGAAGGGTTAATTCCTTGGACATTTGCCTTGGCAAGGGGCTTATTACCGGACTAACCNGGTGGCCCCAAGGCAAATCCCAAACCTCTTTGGTGGGGTTACCCTGTCACCCAAACACCCCGGGACANACACTGGGGGGTTTCCCCAACGCGGTTTTCCGGGAAATTTCCCCTCGTGGGTGTGGNGATGGACAAGNGTGGGACACCCGGANAACTTTNACATTTGCTTGCAACAACCTCGAGTGGGGNCCCCCCCTTTGGGTATCNGNGTCGGGCACACTAATACACNGGTACANCCNCCTGGNANTGTGANAAAATGGCCCCGGGTGGACTATTTAAAACCTGGGTCCCACCGGAGAATACAACACNTGGTNTTTTTAGTAAACNCCCNTTTTANAACTAGACAGCAGGCCAATTTTTATCCCAAANTACCCCTCGGGGTAGACAACATNGGGCCGACAAAATACCAAGNGTTTAGGGCTCGACTGNGGCCCTTTCCCCGGCAAAGGTATCAAACACANAAACACACNGGTTTATGGAGACACACTNCTGTCGGCTAGNAGCCATACACGCNGGACAACGTGCACAACATGTGGGATTNGGGGAGGGTAACCCCCAGNGGATNATTACNNANAACGANCTTTCGTGGGAGCCGTCATTCNTTTGGCGGACATGCGGTCGAAAACGGNTCCACCTTTTTTGNGCACTGAGGCCCACCAANAAGAGTTTTACGCCCCACGCCNCCNGGGGAGAGAACCACCCCCAAAAGGGGTGGCNTAACGATGCAAACACCTAGCGTGCANAGAACAACGNGACCACTTTTGTGGGTATTACACCCCCGAGNGAACAAGCNTGGAGAAAGTGNGGGCNATACAACNCCCACAAAGCGNTGGCGAACAGCCCACTGTTTTGGTACAACAACTGCATTTCATGNGATGGCCACATNTTGGTGGATNAACCACACCCGTTATGGGGATCNGTGCACACANATTTGCGGCCAACACAANGATCNACCGCAGTCANATCAAGATATTCCGACACCNAANAATCANCAAAACATTAAATGNGCACCCTACGANATGCAGGA]
consensusID : consensus_9704#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 330 fasta sequence
[GCAAGAATTGCCCGAGGTNNTACCGCGACGTCGTTCCCCGGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGGCCGTCGCTCCTGCGCTCCGGCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACATGCAAAATGGNAAAACGGGCTGGCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATG]
[+] EMBL AL930121 [GCAAGAATTGCCCGAGGTNNTACCGCGACGTCGTTCCCCGGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGGCCGTCGCTCCTGCGCTCCGGCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACATGCAAAATGGNAAAACGGGCTGGCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9704#0 ATTTCAAACACACCGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCG-T 59
consensus_9704#2 --------------GCAA-GAATTGCCCGAGGT---NNTACCGCGACGTCGTTCCCCGGT 42
consensus_9704#1 --------------GCAA-GAATTGCCCGAGGG---TTTCCTGCGACGTTGTTCCCCG-T 41
** * ** * * * * * * ******* ******** *
consensus_9704#0 TCCGCGAAAGTGCACC-GTACCAAACACTCACACACACACTTACACACACACGCCGCAGC 118
consensus_9704#2 TCCGCGAAAGTGCACC-GTACCAAACACTCACACACACACTTACACACACACGCCGCAGC 101
consensus_9704#1 TCTGCGAAAGTGCACCTGTACCAAACACTCACACACACACTTACACACACACGCCGCAGC 101
** ************* *******************************************
consensus_9704#0 CTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCC-GCA 177
consensus_9704#2 CTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCC-GCA 160
consensus_9704#1 CTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCTGCA 161
************************* ****************************** ***
consensus_9704#0 GTAGAGA-GTCGCACC---GCCCGTCGCTCCTGCG-CTCCGCCAACTT-GATTTCGCGTG 231
consensus_9704#2 GTAGAGA-GTCGCACC---GGCCGTCGCTCCTGCG-CTCCGGCAACTT-GATTTCGCGTG 214
consensus_9704#1 GTAGAGATGTCGCACCTGCGCCGTCTGCTCCTGCNGCTCCGGCAACTTTGATTTCGCGTG 221
******* ******** * * ******** ***** ****** ***********
consensus_9704#0 T--GATTCC--GTGCCCCAAAAA--GGACTAA-CCA--TTGAACACAAG-GACA-GCAAA 280
consensus_9704#2 T--GATTCC--GTGCCCCAAAAA--GGACTAA-CCA--TTGAACACAAG-GACATGCAAA 264
consensus_9704#1 GTAGATTCCCTGTGCCCCAAAAAAAGGACTAAACCAATTTGAAAACCACCAATGGGGACC 281
****** ************ ******* *** ***** ** * * * *
consensus_9704#0 ATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTAT 340
consensus_9704#2 ATGGNAAAACGGGCTGGCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTAT 324
consensus_9704#1 AGGGCCAAAANAATTG--GGTGCACAAACA---CACCTGTNGTGGCCGTGCCCCGGGCAT 336
* ** *** * ** * * * * ** * * * ** * **
consensus_9704#0 CTGATGCTGCAGGCA--TCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCG 398
consensus_9704#2 CTGATG------------------------------------------------------ 330
consensus_9704#1 TNTACCTTACAATTAATTTTCACGGCCCGAAACTTTGGCGGCCN--GGAACACCGGTTAN 394
*
consensus_9704#0 ATCCGGGGGAGGACGATTATGCGACG---GCCCTG-CGGGAAACG----ACCGAGGAAGC 450
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 TTTCGGAAGGGTTAATTCCTTGGACATTTGCCTTGGCAAGGGGCTTATTACCGGACTAAC 454
consensus_9704#0 CGGATACGCCGAAAGTGA--CCTAAACATTCACCG-GAAGCAATCGTGCACGCTCGAGTA 507
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 CNGGTGGCCCCAAGGCAAATCCCAAACCTCTTTGGTGGGGTTACCCTGT-CACCCAAACA 513
consensus_9704#0 CAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGTGCGCAATCCCGCC 567
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 CCCCG-GGACANACACTGGGGGGTTTCCCCAACGCGGTTTTCCGGGA----AATTTCCCC 568
consensus_9704#0 CAGGAGGCGAAGCTGTCCGACGAGCACCAGG-ACATGAAGTGGCTGGACTGTGA--TGAA 624
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 TCGTGGGTGTGGNGATG-GACAAGNGTGGGACACCCGGANAACTTTNACATTTGCTTGCA 627
consensus_9704#0 GCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAG 684
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 ACAACCTCGAGTGGGGNCCCCC---CCTTTGGGTATCNGNGTCGGGCACACTAATACACN 684
consensus_9704#0 ATTAAGGCAAACGAGCTGTGAACGGCGGGGGGGGGGGGTGGAGGAGAGAGTGAACGTGTG 744
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 GGTACANCCNCCTGGNANTGTGANAAAATGGCCCCGGGTGGACTATTTAA--AACCTGGG 742
consensus_9704#0 TGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGT 804
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 TCCCACCG-GAGAATACAACACNTGGTNTTTTTAGTAAAC--NCCCNTTTTANAACTAGA 799
consensus_9704#0 CTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATC 864
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 C-AGCAGGCCAATTTTTATCCCAAANTACCCCTCGGGGTAGACAACATNGGGCCGACAA- 857
consensus_9704#0 TCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATC 924
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 --AATAC---CAAGNGTTTAGGGCTCGACTGNGGCCCTTTCCCCGGCAAAGGTATCAAAC 912
consensus_9704#0 GCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTA 984
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 ACANAAACACACNGGTTTATGGAGACACA-CTNCTGTCGGCTAGNAGCCA-TACACGCNG 970
consensus_9704#0 AACTTTAGCCACGATTATATATGATATATGCCGAGTGAA----AACTGTTCACTTTAAAC 1040
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 GACAACGTGCACAAC-ATGTGGGATTNGGGGAGGGTAACCCCCAGNGGATNATTACNNAN 1029
consensus_9704#0 CGAGCGAATAAATGAGAGTCAT-ACTCTGACGACGATGATCGGGTTTGCTTAATTTTACG 1099
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 AACGANCTTTCGTGGGAGCCGTCATTCNTTTGGCGGACAT-GCGGTCGAAAACGGNTCCA 1088
consensus_9704#0 AGCTCTTTGACTACTGACGCGACGTCCACGTGCATTTATTGCTGCGTAACTGGTGCAACG 1159
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 CCTTTTTTGNGCACTGAGGCC-CACCAANAAGAGTTTTACGCCCCACGCCNCCNGGGG-- 1145
consensus_9704#0 CTATTGAACAACATTTACAAAAGTGGGGGGGGGTGTCCTTCCCATCCTACCTGCCCTTCT 1219
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 ----AGAGAACCACCCCCAAAAG--GGGTGGCNTAACGATGCAAAC--ACCTAGCGTGCA 1197
consensus_9704#0 TATGGTACGCACTGCGCTTTGGTTCACTTTCCACCTCCTCCCGCTCCAGCTCATCGTCCG 1279
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 NAGAACAACGNGACCACTTTTGTGGGTATTACACCCCCGAGNGAACAAGCNTGGAGAAAG 1257
consensus_9704#0 TTTCGTCCTGCTCGTCCTGCTCCATCTCGCGCCGGTACAGCTCCTGAAACACTTCGTACT 1339
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 TGNGGGCN---------------ATACAACNCCCACAAAGCGN-TGGCGAACAGCCCACT 1301
consensus_9704#0 CTTCCAGCGTAACGTACGCCACCTTCACCGCGAACCGCTTGTCGCTCGTGTCCGTAATCT 1399
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 GTTTTGGTACAACA-ACTGCATTTCATGNGATGGCCACATNTTGGTGGATNAACCACACC 1360
consensus_9704#0 GGTGCAGCGGAGGATTGCCCGTCGGTGTGCTTTTCTCCGCCTTGAGCGACCGCGGCTTAA 1459
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 CGTTATGGGGATCNGTGCACACANATTTGCGGC-CAACACAANGATCNACCGCAGTCANA 1419
consensus_9704#0 ACAGTCCCAGCCGCTCCAGGAACGTGTG-CCGGCAGCGCAAATGGTCCANATCGTGCGCA 1518
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 TCA-----AGATATTCCGACACCNAANAATCANCAAAACATTAAATGNGCACCCTACG-- 1472
consensus_9704#0 AAGGCGCTGGATTTCACCACCTCCAGTACCTCGTGGCGCATCGCCTGCAGCANGTAGGCG 1578
consensus_9704#2 ------------------------------------------------------------
consensus_9704#1 -ANATGCAGGA------------------------------------------------- 1482
consensus_9704#0 ATCTTTGCCTCCGTCA 1594
consensus_9704#2 ----------------
consensus_9704#1 ----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||