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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9736#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1117 fasta sequence
[CCGCGGACGCGTGGGTTTTTTTTTTTTTTCTGTTTCTGTTTGTGTGTACACGCGCGTGTATGTGTCACTGTATTGTTGGACCCTCTCCATCGACCGCGCTTGGCGCGCCGCTTTACGGTGAGCTGGAACCGGCCGCCGGACGGTACAGCGGATTCCGGTCCTTGACCGGCAGCGGGTGCGCCTCCGTGTTGAACACCCAATCGTCCAGCGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGCACGTCGTCCTTCACCGGCTCGGTGAGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCCTGCACCGCATCCCAGCCCCAGTCGCGGTACTTCTGGTCGTGCGTCAGCCGCCACATGATGAAGTAGCTTTCGAACGTTTCCGGCCGCAGGATGTAGTACTTCTCCTGCGCTTTCAGTGCCTTCGCCTCGACGCCATCGTTGAAGCGGAACGATTCCGGCCCGAGCCGGGTGTACGTGCGGATGTAGCTCTCGTGGCACGTGTTGGTCAGCCCCTCGCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAACAGACCACCTGCAAAGCACGCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCATGTCGGACACGTACGTCAGACCGGACGGGGTGTTCCGCACCATGTGCTTGATGATGGCCTGCATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGGACTGGATCCACGCCTTCAGCAGGTACTCGTAGAAGCTGTCGCCGAGCGCACCGAGCGACATGTGCTGCTGGCCCCACTTGCCCGTCTTCGGGTTGAGATAGTTAGGGTACAGGCCCTTCGGCTTCTCGATGTCCTTCAGCACCGCCCGGATCGTCTGGACCCGCTCCCGGTACACCGAGTCGCCGGTGATGTCGCTCAGGTAGGCGAACTCCATGTGCAGCGTGCCGAACTCGGACAGGATGCTGCTGCCACCGCTTGCCCAGCCGTAGTTTTTGCTCACCTTTGCGTGTGTGTGTGTGTGTGGGTGCGG]
[+] EMBL BM655881 [CCGCGGACGCGTGGGTTTTTTTTTTTTTTCTGTTTCTGTTTGTGTGTACACGCGCGTGTATGTGTCACTGTATTGTTGGACCCTCTCCATCGACCGCGCTTGGCGCGCCGCTTTACGGTGAGCTGGAACCGGCCGCCGGACGGTACAGCGGATTCCGGTCCTTGACCGGCAGCGGGTGCGCCTCCGTGTTGAACACCCAATCGTCCAGCGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGCACGTCGTCCTTCACCGGCTCGGTGAGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCCTGCACCGCATCCCAGCCCCAGTCGCGGTACTTCTGGTCGTGCGTCAGCCGCCACATGATGAAGTAGCTTTCGAACGTTTCCGGCCGCAGGATGTAGTACTTCTCCTGCGCTTTCAGTGCCTTCGCCTCGACGCCATCGTTGAAGCGGAACGATTCCGGCCCGAGCCGGGTGTACGTGCGGATGTAGCTCTCGTGGCACGTGTTGGTCAGCCCCTCGCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAACAGACCACCTGCAAAGCACGCCAGATGGTCCATCT ]
[-] EMBL BX609004 [ GCGGGTGCGCCTCCGTGTTGAACACCCAATCGTCCAGCGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGCACGTCGTCCTTCACCGGCTCGGTGAGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGGGCGGCAGTGCTTCTCGAGTGCCTGCACCGCATCCCAGCCCCAGTCGCGGTACTTCTGGTCGTGCGTCAGCCGCCACATGATGAAGTAGCTTTCGAACGTTTCCGGCCGCAGGATGTAGTACTTCTCCTGCGCTTTCAGTGCCTTCGCCTCGACGCCATCGTTGAAGCGGAACGATTCCGGCCCGAGCCGGGTGTACGTGCGGATGTAGCTCTCGTGGCACGTGTTGGTCAGCCCCTCGCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAACAGACCACCTGCAAAGCACGCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCATGTCGGACACGTACGTCAGACCGGACGGGGTGTTCCGCACCATGTGCTTGATGATGGCCTGCATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGGAC ]
[-] EMBL BM613839 [ cgTGCATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGGACTGGATCCACGCCTTCAGCAGGTACTCGTAGAAGCTGTCGCCGAGCGCACCGAGCGACATGTGCTGCTGGCCCCACTTGCCCGTCTTCGGGTTGAGATAGTTAGGGTACAGGCCCTTCGGCTTCTCGATGTCCTTCAGCACCGCCCGGATCGTCTGGACCCGCTCCCGGTACACCGAGTCGCCGGTGATGTCGCTCAGGTAGGCGAACTCCATGTGCAGCGTGCCGAACTCGGACAGGATGCTGCTGCCACCGCTTGCCCAGCCGTAGTTTTTGCTCACCTTTGCGTGTGTGTGTGTGTGTGGGTGCGG]
consensusID : consensus_9736#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 958 fasta sequence
[GTCTTCTCCCCCCCCCCCTGTCCTGCCACGCACTACAGAGATAAGGTATCACCCGGTGGCCGAGCAAAATTAACACTCTTCTTCGCCCAAACTTATCTGGCTCCTTTCAGCTGAGATACAGGGATAAGAAATCTTGCGGTTTTGTTTTTCTACTTTTCTTCTTCTTCTTCTGTTTCTGTTTGTGTGTACACGCGCGTGTATGTGTCACTGTATTGTTGGACCCTCTCCATCGACCGCGCTTGGCGCGCCGCTTTACGGTGAGCTGGAACCGGCCGCCGGACGGTACAGCGGATTCCGGTCCTTGACCGGCAGCGGGTGCGCCTCCGTGTTGAACACCCAATCGTCCAGCGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCT-GCACGTCGTCCTTCACCGGCTCGGTGAGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCCTGCACCGCATCCCAGCCCCAGTCGCGGTACTTCTGGTCGTGCGTCAGCCGCCACATGATGAAGTAGCTTTCGAACGTTTCAGGCCGCAGGATGTAGTACTTCTCCTGCGCTTTCAGTGCCTTCGCCTCGACGCCATCGTTGAAGCGGAACGATTCCGGCCCGAGCCGGGTGTACGTGCGGATGTAGCTCTCGTGGCACGTGTTGGTCAGCCCCTCGCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAACAGACCACCTGCAAAGCACGCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCATGTCGGACACGTACGTCAGACCGGACGGGGTGTTCCGCACCATGTGCTTGATGATGGCCTGCATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGACCCTCGGGCGA]
[+] EMBL AGA281866 [GTCTTCTCCCCCCCCCCCTGTCCTGCCACGCACTACAGAGATAAGGTATCACCCGGTGGCCGAGCAAAATTAACACTCTTCTTCGCCCAAACTTATCTGGCTCCTTTCAGCTGAGATACAGGGATAAGAAATCTTGCGGTTTTGTTTTTCTACTTTTCTTCATCTTCTTCTGTTTCTGTTTGTGTGTACACGCGCGTGTATGTGTCACTGTATTGTTGGACCCTCTCCATCGACCGCGCTTGGCGCGCCGCTTTACGGTGAGCTGGAACCGG ]
[+] EMBL AGA282331 [ TCTTCTCCCCCCCCCCCTGTCCTGCCACGCACTACAGAGATAAGGTATCACCCGGTGGCCGAGCAAAATTAACACTCTTCTTCGCCCAAACTTATCTGGCTCCTTTCAGCTGAGATACAGGGATAAGAAATCTTGCGGTTTTGTTTTTCTACTTTTCTTCTTCTTCTTCTGTTTCTGTTTGTGTGTACACCCGCGTGTATGTGTCACTGTATTGTTGGACCCTCTCCATC ]
[+] EMBL AGA281892 [ CCCCTGTCCTGCCACGCACTACAGAGATAAGGTATCACCCGGTGGCCGAGCAAAATTAACACTCTTCTTCGCCCAAACTTATCTGGCTCCTTTCAGCTGAGATACAGGGATAAGAAATCTTGCGGTTTTGTTTTTCTACTTTTCTTCTTCTTCTTCTGTTTCTGTTTGTGTGTACACGCGCGTGTATGTGTCACTGTATTGTTGGACCCTCTCCATCGACCGCGCTTGGCGCGCCGCTTTACGGTGAGCTGGAACCGGCCGCCGGACGGTACAGCGGATTCCGGTCCTTGACCGGCAGCGGGTGCGCCT ]
[-] EMBL BX606585 [ AGAGATAAGGTATCACCCGGTGGCCGAGCAAAATTAACACTCTTCTTCGCCCAAACTTATCTGGCTCCTTTCAGCTGAGATACAGGGATAAGAAATCTTGCGGTTTTGTTTTTCTACTTTTCTTCTTCTTCTTCTGTTTCTGTTTGTGTGTACACGCGCGTGTATGTGTCACTGTATTGTTGGACCCTCTCCATCGACCGCGCTTGGCGCGCCGCTTTACGGTGAGCTGGAACCGGCCGCCGGACGGTACAGCGGATTCCGGTCCTTGACCGGCAGCGGGTGCGCCTCCGTGTTGAACACCCAATCGTCCAGCGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCT GCACGTCGTCCTTCACCGGCTCGGTGAGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGTGCGGCAGTGCT ]
[+] EMBL AGA282048 [ GCGCCGCTTTACGGTGAGCTGGAACCGGCCGCCGGACGGTACAGCGGATTCCGGTCCTTGACCGGCAGCGGGTGCGCCTCCGTGTTGAACACCCAATCGTCCAGCGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCT GCACGTCGTCCTTCACCGGCTCGGTGAGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCCTGCACCGCATCCCAGCCCCAGTCGCGGTACTTCTGGTCGTGCGTCAGCCGCCACATGATGAAGTAGCTTT ]
[+] EMBL AGA282788 [ GTACAGCGGATTCCGGTCCTTGACCGGCAGCGGGTGCGCCTCCGTGTTGAACACCCAATCGTCCAGCGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCT GCACGTCGTCCTTCACCGGCTCGGTGAGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCCTGCACCGCATCNCAGCCCCAGTCGCGGTACTTCTGGTCGTGCGTCAGCCGCCACATGATGAAGTAGC ]
[+] EMBL AGA283212 [ GCAGCGGGTGCGCCTCCGTGTTGAACACCCAATCGTCCAGCGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGGCACGTCGTCCTTCACCGGCTCGGT AGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCCTGCACCGCATCCCAGCCCCAGTCGCGGTACTTCTGGTCGTGCGTCAGCCGCCACATGATGAAGTAGCTT ]
[-] EMBL AL932146 [ AGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCT GCACGTCGTCCTTCACCGGCTCGGTGAGGTAGACGTTCTTCAGCCCGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCCTGCACCGCATCCCAGCCCCAGTCGCGGTACTTCTGGTCGTGCGTCAGCCGCCACATGATGAAGTAGCTTTCGAACGTTTCAGGCCGCAGGATGTAGTACTTCTCCTGCGCTTTCAGTGCCTTCGCCTCGACGCCATCGTTGAAGCGGAACGATTCCGGCCCGAGCCGGGTGTACGTGCGGATGTAGCTCTCGTGGCACGTGTTGGTCAGCCCCTCGCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAACAGACCACCTGCAAAGCACGCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCATGTCGGACACGTACGTCAGACCGGACGGGGTGTTCCGCACCATGTGCTTGATGATGGCCTGCATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGACCCTCGGGCGA]
consensusID : consensus_9736#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 672 fasta sequence
[TCCTTGCGTGTCGTCGTTGCNTCTGTGTGTCGTNTGTCNGTGNGTTACTGTTTCTTTTCTTCTTCTTCGTTCTTNTTCGCCCNAACGTTATCTGGCTCCTTTCAGCTGAGATACAGGGATAAGAAATCGTGCGGTTTTGTTTTTCTACTTGTTCTTCGTTCGTTCTTCTGTTTCTGTTTGTGTGTACACGCGCAGTGTATGTGTCACATGTATTGTTGGACCCTCTCCATCAGACACAGCAGCATTGGCAGCAGCCAGCATTTACAGGTGAGCATGGAACCAGGCCAGCCAGGACAGGTACAGCAGGATTCCAGGTCNCATTGACCAGGCAGCAGGGTGCAGCACTCACAGTGTTGAACACCCAAATCGTCCAGCAGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGCACGTCGTCNCTTCACCAGGCTCAGGTGAGGTAGACGTTCTTCAGCCCAGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCACTGCACCGCATCCCAGCCCCAGTCGCAGGTACTTCTGGTCGTGCGTCAGCCAGCACACATGATGAAGAAGCTTTCGAACGTTTCCGGCCGCAGGATGTAGTACTTCTCACTGCGCTTTCAAACCTCGGGCNATTCT]
[-] EMBL AL930299 [TCCTTGCGTGTCGTCGTTGCNTCTGTGTGTCGTNTGTCNGTGNGTTACTGTTTCTTTTCTTCTTCTTCGTTCTTNTTCGCCCNAACGTTATCTGGCTCCTTTCAGCTGAGATACAGGGATAAGAAATCGTGCGGTTTTGTTTTTCTACTTGTTCTTCGTTCGTTCTTCTGTTTCTGTTTGTGTGTACACGCGCAGTGTATGTGTCACATGTATTGTTGGACCCTCTCCATCAGACACAGCAGCATTGGCAGCAGCCAGCATTTACAGGTGAGCATGGAACCAGGCCAGCCAGGACAGGTACAGCAGGATTCCAGGTCNCATTGACCAGGCAGCAGGGTGCAGCACTCACAGTGTTGAACACCCAAATCGTCCAGCAGGCAGCAGCGAGTCGTCGGAAAACAGCAGATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGCACGTCGTCNCTTCACCAGGCTCAGGTGAGGTAGACGTTCTTCAGCCCAGGTGTAGCCGGTCGGTGTGCGGCAGTGCTTCTCGAGTGCACTGCACCGCATCCCAGCCCCAGTCGCAGGTACTTCTGGTCGTGCGTCAGCCAGCACACATGATGAAGAAGCTTTCGAACGTTTCCGGCCGCAGGATGTAGTACTTCTCACTGCGCTTTCAAACCTCGGGCNATTCT]
consensusID : consensus_9736#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence
[TGGACAGTCAANGCNCCCGCCTAACTAACTGGATCGAATCGTATNCCNTTCTCGATACCGCGTNTTTCCCGGTCCCTGCNCCGGGAATTGTAAGTACCTTGTCATCCTTGCCGCCTTTTCTAACGTGCCCTTCCGGGCCTTTNGAACCGCCCAANTTCCGTTTGAAACGCCGGGAACGANTTCCGGCCCGATCCGGNTGTACGTNGCCGGATGTACGCTCTCGTGGCACTGTGCTTGGTCAGCCCCTCGCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAACAGACCACCTGCAAAGCACGCCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCATGTCGGACACGTACGTCAGACCGGACGGGGTGTTCCGCACATGTGCTTTGATGATGGCCTGCATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGGACTGGATCCACGCCTTCAGCAGGTACTCGTAGAAGCTGTCGCCGAGCGCACCGAGCGACATGTGCTGCTGGCCCCACTTGCCCGTCTTCGTCATCGTGCCGAATTCTTGCCTG]
[-] EMBL BX468905 [TGGACAGTCAANGCNCCCGCCTAACTAACTGGATCGAATCGTATNCCNTTCTCGATACCGCGTNTTTCCCGGTCCCTGCNCCGGGAATTGTAAGTACCTTGTCATCCTTGCCGCCTTTTCTAACGTGCCCTTCCGGGCCTTTNGAACCGCCCAANTTCCGTTTGAAACGCCGGGAACGANTTCCGGCCCGATCCGGNTGTACGTNGCCGGATGTACGCTCTCGTGGCACTGTGCTTGGTCAGCCCCTCGCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAACAGACCACCTGCAAAGCACGCCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCATGTCGGACACGTACGTCAGACCGGACGGGGTGTTCCGCACATGTGCTTTGATGATGGCCTGCATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGGACTGGATCCACGCCTTCAGCAGGTACTCGTAGAAGCTGTCGCCGAGCGCACCGAGCGACATGTGCTGCTGGCCCCACTTGCCCGTCTTCGTCATCGTGCCGAATTCTTGCCTG]
consensusID : consensus_9736#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 470 fasta sequence
[CAGCACCGCCCGGATCGTCTGGACCCGCTCCCGGTACACCGAGTCGCCGGTGATGTCGCTCAGGTAGGCGAACTCCATGTGCAGCGTGCCGAACTCGGACAGGATGCTGCTGCCGCCGCTTGCCCAGCCGTAGTTTTTGCTCACCCCATTGTGCACGTTAACCAGCGCGTACGGGATGCCGGTCGGGGTCTGGAAGGCGGGCAGCAGCTTGTCCGCGACGTAGCGCGCCTTCTCCAGGAACATCCGGTCGCCGGTGAAGGCGTAGCAGGTGAGGAAGCCCCCGATGAACCGTATGTTCGTCTCGAACACGGACAGCTCCGCGTCCACGTTGTCGAGGGTGAACTTGCGCTCGACCCACTCCCGCCCCTCGTCGAACTCCTTGTGCAGGCCCATCAGGTAGAGCGTGTCCAGCCCGTCCACGATCGTCGCGCCGAGATCGAACGACCCGAAGATGCTGTTGCTGTGGCCGC]
[-] EMBL AGA280710 [CAGCACCGCCCGGATCGTCTGGACCCGCTCCCGGTACACCGAGTCGCCGGTGATGTCGCTCAGGTAGGCGAACTCCATGTGCAGCGTGCCGAACTCGGACAGGATGCTGCTGCCGCCGCTTGCCCAGCCGTAGTTTTTGCTCACCCCATTGTGCACGTTAACCAGCGCGTACGGGATGCCGGTCGGGGTCTGGAAGGCGGGCAGCAGCTTGTCCGCGACGTAGCGCGCCTTCTCCAGGAACATCCGGTCGCCGGTGAAGGCGTAGCAGGTGAGGAAGCCCCCGATGAACCGTATGTTCGTCTCGAACACGGACAGCTCCGCGTCCACGTTGTCGAGGGTGAACTTGCGCTCGACCCACTCCCGCCCCTCGTCGAACTCCTTGTGCAGGCCCATCAGGTAGAGCGTGTCCAGCCCGTCCACGATCGTCGCGCCGAGATCGAACGACCCGAAGATGCTGTTGCTGTGGCCGC]
[-] EMBL AGA281630 [ CCGAGTCGCCGGTGATGTCGCTCAGGTAGGCGAACTCCATGTGCAGCGTGCCGAACTCGGACAGGATGCTGCTGCCGCCGCTTGCCCAGCCGTAGTTTTTGCTCACCCCATTGTGCACGTTAACCAGCGCGTACGGGATGCCGGTCGGGGTCTGGAAGGCGGGCAGCAGCTTGTCCGCGACGTAGCGCGCCTTCTCCAGGAACATCCGGTCGCCGGTGAAGGCGTAGCAGGTGAGGAAGCCCCCGATGAACCGTATGTTCGTCTCGAACACGGACAGCTCCGCGTCCACGTTGTCGAGGGTGAACTTGCGCTCGACCCACTCCCGCCCCTCGTCGAACTCCTTGTGCAGGCCCATCAGGTAGAGCGTGTCCAGCCCGTCCACGATCGTCGCGCCGAGATCGAACGACCCGAAGATGCTGTTGCTGTGGCCGC]
[-] EMBL AGA281163 [ TCACCCCATTGTGCACGTTAACCAGCGCGTACGGGATGCCGGTCGGGGTCTGGAAGGCGGGCAGCAGCTTGTCCGCGACGTAGCGCGCCTTCTCCAGGAACATCCGGTCGCCGGTGAAGGCGTAGCAGGTGAGGAAGCCCCCGATGAACCGTATGTTCGTCTCGAACACGGACAGCTCCGCGTCCACGTTGTCGAGGGTGAACTTGCGCTCGACCCACTCCCGCCCCTCGTCGAACTCCTTGTGCAGGCCCATCAGGTAGAGCGTGTCCAGCCCGTCCACGATCGTCGCGCCGAGATCGAACGACCCGAAGATGCTGTTGCTGTGGCCGC]
[-] EMBL AGA280349 [ TTGTGCACGTTAACCAGCGCGTACGGGATGCCGGTCGGGGTCTGGAAGGCGGGCAGCAGCTTGTCCGCGACGTAGCGCGCCTTCTCCAGGAACATCCGGTCGCCGGTGAAGGCGTAGCAGGTGAGGAAGCCCCCGATGAACCGTATGTTCGTCTCGAACACGGACAGCTCCGCGTCCACGTTGTCGAGGGTGAACTTGCGCTCGACCCACTCCCGCCCCTCGTCGAACTCCTTGTGCAGGCCCATCAGGTAGAGCGTGTCCAGCCCGTCCACGATCGTCGCGCCGAGATCGAACGACCCGAAGATGCTGTTGCTGTGGCCGC]
[-] EMBL AGA280164 [ CGGGATGCCGGTNGGGGTNTGGAAGGCGGGCAGCAGCTTGTCCGCGACGTAGCGCGCCTTCTCCAGGAACATCCGGTCGCCGGTGAAGGCGTAGCAGGTGAGGAAGCCCCCGATGAACCGTATGTTCGTCTCGAACACGGACAGCTCCGCGTCCACGTTGTCGAGGGTGAACTTGCGCTCGACCCACTCCCGCCCCTCGTCGAACTCCTTGTGCAGGCCCATCAGGTAGAGCGTGTCCAGCCCGTCCACGATCGTCGCGCCGAGATCGAACGACCCGAAGATGCTGTTGCTGTGGCCGC]
[-] EMBL AGA280196 [ ACATCCGGTCGCCGGTGAAGGCGTAGCAGGTGAGGAAGCCCCCGATGAACCGTATGTTCGTCTCGAACACGGACAGCTCCGCGTCCACGTTGTCGAGGGTGAACTTGCGCTCGACCCACTCCCGCCCCTCGTCGAACTCCTTGTGCAGGCCCATCAGGTAGAGCGTGTCCAGCCCGTCCACGATCGTCGCGCCGAGATCGAACGACCCGAAGATGCTGTTGCTGTGGCCGC]
consensusID : consensus_9736#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 236 fasta sequence
[GCGGCCACAGCAGCATTTTCTTCGGGTCGTTCGATCTCGGGGGGACCCTCGTGGACGGGCTGGACACACTCTACCTGATGGGCCTGCACAAGGAGTTCGTCGAGGGGCGGGAGTGGGTCTAGCGCAGGTTCACCCTCGACAACGTGGACGCGGAGCTGTCCGTGTTCGAGATGATCATACGGTTCATCGGGGGCTTCCTCACCTGCTACGCCTTCATCGGTGATCGGCTGTTCCTG]
[+] EMBL AGA280578 [GCGGCCACAGCAGCATTTTCTTCGGGTCGTTCGATCTCGGGGGGACCCTCGTGGACGGGCTGGACACACTCTACCTGATGGGCCTGCACAAGGAGTTCGTCGAGGGGCGGGAGTGGGTCTAGCGCAGGTTCACCCTCGACAACGTGGACGCGGAGCTGTCCGTGTTCGAGATGATCATACGGTTCATCGGGGGCTTCCTCACCTGCTACGCCTTCATCGGTGATCGGCTGTTCCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9736#1 GTCTTCTCCCCCCCCCCCTGTCCTGCCACGCACTACAGAGATAAGGTATCACCCGGTGGC 60
consensus_9736#2 ---TCCTTGCGTGTCGTCGTTGCNTCTGTGTGTCGTNT-GTCNGTGNGTTACT--GTTTC 54
consensus_9736#0 ------------------------------------------------------------
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 CGAGCAAAATTAACACTCTTCTTCGCCCAAAC-TTATCTGGCTCCTTTCAGCTGAGATAC 119
consensus_9736#2 TTTTCTTCTTCTTCGTTCTTNTTCGCCCNAACGTTATCTGGCTCCTTTCAGCTGAGATAC 114
consensus_9736#0 ------------------------------------------------------------
consensus_9736#3 ---------------------------TGGACAGTCAANGCNCCCGCCTAACTAA----C 29
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 AGGGATAAGAAATCTTGCGGTTTTGTTTTTCTACTT-TTCTTCTTC--TTCTTCTGTTTC 176
consensus_9736#2 AGGGATAAGAAATCGTGCGGTTTTGTTTTTCTACTTGTTCTTCGTTCGTTCTTCTGTTTC 174
consensus_9736#0 ----------------------CCGCGGACGCGTGGGTTTTTTTTT--TTTTTCTGTTTC 36
consensus_9736#3 TGGATCGAATCGTATNCCNTTCTCGATACCGCGTNT-TTCCCGGTCCCTGCNCCGGGAAT 88
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 TGTTTGTGTGT----ACACGCGC-GTGTATGTGTCAC-TGTATTGTTGGACCCTCTCCAT 230
consensus_9736#2 TGTTTGTGTGT----ACACGCGCAGTGTATGTGTCACATGTATTGTTGGACCCTCTCCAT 230
consensus_9736#0 TGTTTGTGTGT----ACACGCGC-GTGTATGTGTCAC-TGTATTGTTGGACCCTCTCCAT 90
consensus_9736#3 TGTAAGTACCTTGTCATCCTTGCCGCCT-TTTCTAACGTGCCCTTCCGGGCCTTTNGAAC 147
consensus_9736#4 ---------------------------------------------CAGCACCGCCCGGAT 15
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 CGACCGCGC-----TTGG--CG-----CGCCGCTTTACGGTGAGC-TGGAACC-GGCCGC 276
consensus_9736#2 CAGACACAGCAGCATTGG--CAGCAGCCAGCATTTACAGGTGAGCATGGAACCAGGCCAG 288
consensus_9736#0 CGACCGCGC-----TTGG--CG-----CGCCGCTTTACGGTGAGC-TGGAACC-GGCCGC 136
consensus_9736#3 CGCCCAANTTCCGTTTGAAACGCCGGGAACGANTTCCGGCCCGATCCGGNTGTACGTNGC 207
consensus_9736#4 CGTCTGGAC------CCGCTCCCGGTACACCGAGTCGCCGGTGATGTCGCTCA-GGTAGG 68
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 C--GGAC-GGTACAGC-GGATTCCGG---TCCTTGACC-GGCAGC-GGGTGCGCCTCC-- 325
consensus_9736#2 CCAGGACAGGTACAGCAGGATTCCAGGTCNCATTGACCAGGCAGCAGGGTGCAGCACTCA 348
consensus_9736#0 C--GGAC-GGTACAGC-GGATTCCGG---TCCTTGACC-GGCAGC-GGGTGCGCCTCC-- 185
consensus_9736#3 C--GGAT--GTACGCTCTCGTGGCAC-TGTGCTTGGTC-AGCCCCTCGCCGATCTCCATG 261
consensus_9736#4 C--GAACTCCATGTGCAGCGTGCCGA----ACTCGGACAGGATGCTGCTGCCGCCGCTTG 122
consensus_9736#5 -----GCGGCCACAGCAGCATTTTCT-TCGGGTCGTTCGATCTCGGGGGGACCCTCGTGG 54
* * * *
consensus_9736#1 --GTGTTGAACAC--CCAA-TCGTCCAGC--GGCAGCAGCGAGTCGTCGGAAAACAGCAG 378
consensus_9736#2 CAGTGTTGAACAC--CCAAATCGTCCAGCA-GGCAGCAGCGAGTCGTCGGAAAACAGCAG 405
consensus_9736#0 --GTGTTGAACAC--CCAA-TCGTCCAGC--GGCAGCAGCGAGTCGTCGGAAAACAGCAG 238
consensus_9736#3 TACTGCTGGGAAT--ACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAACAGACCACCTG 319
consensus_9736#4 CCCAGCCGTAGTT--TTTGCTCACCCCATT--GTGCACGTTAACCAGCGCGTACGGGATG 178
consensus_9736#5 ACGGGCTGGACACACTCTACCTGATGGGCC-TGCACAAGGAGTTCGTCGAGGGGCGGGAG 113
* * * * *
consensus_9736#1 ATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGCACGTCGT-CC-TTCACC 436
consensus_9736#2 ATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGCACGTCGT-CNCTTCACC 464
consensus_9736#0 ATAGAGGTACTTGAGCGTTTCGGCGAGGAAGAAGCTCTGCTGCACGTCGT-CC-TTCACC 296
consensus_9736#3 CAAAGCACGCCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCATGTCGGACACG 379
consensus_9736#4 CCGGTCGGGGTCTGGAAGGCGGGCAGCAGCTTGTCCGCGACGTAGCGCGCCTTCTCCAGG 238
consensus_9736#5 TGGGTCTAGCGCAGGTTCACCCTCGACAACGTGGACGCGGAGCTGTCCGTGTTCGAGATG 173
* * * * *
consensus_9736#1 -GGCTC-GGTGAGGTAGACGTTCTTCAGCCC-GGTGTAGCCGGTCGGTGTGCGGCAGTGC 493
consensus_9736#2 AGGCTCAGGTGAGGTAGACGTTCTTCAGCCCAGGTGTAGCCGGTCGGTGTGCGGCAGTGC 524
consensus_9736#0 -GGCTC-GGTGAGGTAGACGTTCTTCAGCCC-GGTGTAGCCGGTCGGTGTGCGGCAGTGC 353
consensus_9736#3 TACGTCAGACCGGACGG--GGTGTTCCGCAC--ATGTGCTTTGATGATGGCCTGCATCGC 435
consensus_9736#4 AACATCCGGTC-GCCGGTGAAGGCGTAGCAGGTGAGGAAGCCCCCGATGAACCGTATGTT 297
consensus_9736#5 ATCATACGGTTCATCGGGGGCTTCCTCACCTGCTACGCCTTCATCGGTGATCGGCTGTTC 233
* * * * * ** * *
consensus_9736#1 TTC-TCGAGTGC---CTGCACCGCATCCCAGCCCCAGTCGC-GGTACTTCTGGTCGTGCG 548
consensus_9736#2 TTC-TCGAGTGCA--CTGCACCGCATCCCAGCCCCAGTCGCAGGTACTTCTGGTCGTGCG 581
consensus_9736#0 TTC-TCGAGTGC---CTGCACCGCATCCCAGCCCCAGTCGC-GGTACTTCTGGTCGTGCG 408
consensus_9736#3 GTCGTCGTACATT--TCGCGC-GCCTCCCAGTCCTCCTGCCCGGACTGGATCCACGC-CT 491
consensus_9736#4 CGTCTCGAACACGGACAGCTCCGCGTCCACGTTGTCGAGGG-TGAACTTGCGCTCGACCC 356
consensus_9736#5 CTG--------------------------------------------------------- 236
consensus_9736#1 TCAGCCGCCACA--TGATGAAGTAGCTTT-CGAACGTTTCAGGCCGCAGGA-TGTAGTAC 604
consensus_9736#2 TCAGCCAGCACACATGATGAAGAAGCTTT-CGAACGTTTCCGGCCGCAGGA-TGTAGTAC 639
consensus_9736#0 TCAGCCGCCACA--TGATGAAGTAGCTTT-CGAACGTTTCCGGCCGCAGGA-TGTAGTAC 464
consensus_9736#3 TCAGCAGGTACT--CGTAGAAGCTGTCGC-CGAGCGCACCGAGCGACATG--TGCTGCTG 546
consensus_9736#4 ACTCCCGCCCCT--CGTCGAACTCCTTGTGCAGGCCCATCAGGTAGAGCGTGTCCAGCCC 414
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 TTCTC----CTGCGCTTTCAGTGCCTTCGCCTCGACGCCATCGTTGAAGCGGAACGATTC 660
consensus_9736#2 TTCTCA---CTGCGCTTTCAA-------ACCTCGG-GCNATTCT---------------- 672
consensus_9736#0 TTCTC----CTGCGCTTTCAGTGCCTTCGCCTCGACGCCATCGTTGAAGCGGAACGATTC 520
consensus_9736#3 GCCCCA---CTTGCCCGTCTTCGTCATCGTGCCGAATTCTTGCCTG-------------- 589
consensus_9736#4 GTCCACGATCGTCGCGCCGAGATCGAACGACCCGAAGATGCTGTTGCTGTGGCCGC---- 470
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 CGGCCCGAGCCGGGTGTACGTGCGGATGTAGCTCTCGTGGCACGTGTTGGTCAGCCCCTC 720
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 CGGCCCGAGCCGGGTGTACGTGCGGATGTAGCTCTCGTGGCACGTGTTGGTCAGCCCCTC 580
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 GCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAA 780
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 GCCGATCTCCATGTACTGCTGGGAATACTGATTGTTGAGCGAGGTACCGCCGAGCCCGAA 640
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 CAGACCACCTGCAAAGCACGCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCAT 840
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 CAGACCACCTGCAAAGCACGCCAGATGGTCCATCTTGTGCTCGAGCCGGTCGAACTTCAT 700
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 GTCGGACACGTACGTCAGACCGGACGGGGTGTTCCGCACCATGTGCTTGATGATGGCCTG 900
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 GTCGGACACGTACGTCAGACCGGACGGGGTGTTCCGCACCATGTGCTTGATGATGGCCTG 760
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 CATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGACCCTCGGGCGA-- 958
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 CATCGCGTCGTCGTACATTTCGCGCGCCTCCCAGTCCTCCTGCCCGGACTGGATCCACGC 820
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 ------------------------------------------------------------
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 CTTCAGCAGGTACTCGTAGAAGCTGTCGCCGAGCGCACCGAGCGACATGTGCTGCTGGCC 880
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 ------------------------------------------------------------
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 CCACTTGCCCGTCTTCGGGTTGAGATAGTTAGGGTACAGGCCCTTCGGCTTCTCGATGTC 940
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 ------------------------------------------------------------
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 CTTCAGCACCGCCCGGATCGTCTGGACCCGCTCCCGGTACACCGAGTCGCCGGTGATGTC 1000
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 ------------------------------------------------------------
consensus_9736#2 ------------------------------------------------------------
consensus_9736#0 GCTCAGGTAGGCGAACTCCATGTGCAGCGTGCCGAACTCGGACAGGATGCTGCTGCCACC 1060
consensus_9736#3 ------------------------------------------------------------
consensus_9736#4 ------------------------------------------------------------
consensus_9736#5 ------------------------------------------------------------
consensus_9736#1 ---------------------------------------------------------
consensus_9736#2 ---------------------------------------------------------
consensus_9736#0 GCTTGCCCAGCCGTAGTTTTTGCTCACCTTTGCGTGTGTGTGTGTGTGTGGGTGCGG 1117
consensus_9736#3 ---------------------------------------------------------
consensus_9736#4 ---------------------------------------------------------
consensus_9736#5 ---------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||