cluster # 9756

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Anopheles gambiae
cluster # 9756 cluster # 9756 Sequences # 20 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9756#0 length = 1208 sequences # 14

consensus_9756#1 length = 660 sequences # 2
consensus_9756#2 length = 613 sequences # 4

consensusID : consensus_9756#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1208
fasta sequence

                              [CTGGTGAGATCGGATCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC-GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT-GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT-CCGAGTTTTTACACACACATACA-CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATACAGTTTTATGTTTCCGAGTG]

[+] EMBL CNS09NQK             [CTGGTGAGATCGGATCAGCTCGAACGGAGTGGCCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAGGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGGAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCTGGGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX603188             [   GTGAGATCGGATCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09KAO             [        tTCTGAT AGCTCGAACGGAGTGTCCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATAGCCCCTAATTTTTGTGCC                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX608668             [            GATCAGCTCTAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGC                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM612653             [              ccgGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX611051             [                         GGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAAC GCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX616028             [                                                                                                                                     AGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGATGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTA CCAGCAT                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM648979             [                                                                                                                                               ccgTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATC                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM655027             [                                                                                                                                                                                                                                                                                                                                                                       ccgGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATTCCCGAGTTTTTACACACACATACACCCACTCTAAACTACTACTGC                                                                                                                                                                                                                           ]
[+] EMBL BX608676             [                                                                                                                                                                                                                                                                                                                                                                                                                           GACATTTCGGCCGAGGAAGCGACAGATATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCC GAGTCCAGGGTCAGCATTGTGAAGCAAGCTTTTGCAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT CCGAGTTTTTACACACACATACA CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATAC                   ]
[+] EMBL BX615635             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAAAGCT GGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT CCGAGTTTTTACACACACATACA CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTaaa                                                                  ]
[+] EMBL BX617155             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGACCGGCGATGGAACGATAACGATTGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTA                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS09KAP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGAAACGCCTGTGCCGTTTACGTACAAATAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT CCGAGTTTTTACACACACATACA CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATACAGTTTTATGTTTCCGAGTG]
[-] EMBL CNS09NQL             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCGGATTGAGCGCCTCGATCGATTCGGATGCGTACTTTGACCTGATGATGCGCCAGGCGTTTAAACTGTAGAAACGCCTGTGCCGTTTACGTACAACTAATATTTAATCGTACCACTCACCCATGGCCCATTTTTTATGTACCCAGCATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATT CCGAGTTTTTAAAAAAACATACA CCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGATGATGAAAATGTGCTGCACCCGGAATGAGCAAAACACGCAAACGTTTTCCGATTGTTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGA                                ]




>consensus_9756#0
CTGGTGAGATCGGATCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAA
ACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAA
CGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACAT
CGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCT
CTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGT
GGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAAC
AAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCG
GCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAAC
ATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGTG
AAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGATGGAACGATAACGATTGAGGATTTA
AAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGAT
GTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCTCCGTG
ACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGGATGCG
TACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTTTACGT
ACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGCATACA
TCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATTCCGAGTTTTTACAC
ACACATACACCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAGATGAA
CCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCAGCTGA
TGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTGTTGTT
GAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATACAGTTTTATGTT
TCCGAGTG

consensusID : consensus_9756#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 660
fasta sequence

                              [CCGCCCACGCGTCCGCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTTTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAACAAGCAGCTAAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACCGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAACATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGTGCAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGATGGAACGATAACGATCGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGAT]

[+] EMBL BM584232             [CCGCCCACGCGTCCGCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTTTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAACAAGCAGCTAAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACCGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAACATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGTGCAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGATGGAACGATAACGATCGAGGATTTAAAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGAT]
[+] EMBL BM626800             [          ccgatCAGCTCGAACGGAGTGACCGCTACAAGGGAAATAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGAGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTATTTTACTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGTCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGACTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAACATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGTGCAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGATGGAACGATAACGATCGAGGAT                                                               ]




>consensus_9756#1
CCGCCCACGCGTCCGCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAA
ACAGTGAAGATCTGTGCAGTGTAGAAAGGTTTAGAAGCAGAACAACCAACCATCTTCGAA
CGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACAT
CGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCT
CTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGT
GGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAAC
AAGCAGCTAAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACCGGGCTGGACATTTCG
GCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAAC
ATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGTG
CAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGATGGAACGATAACGATCGAGGATTTA
AAGAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGGAGGAT

consensusID : consensus_9756#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 613
fasta sequence

                              [GCAGAATCCCCCGAGGTTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGTCGAAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGACTGGAACGATAACGATTGAGCGATTTAAACGAATGTGTA]

[+] EMBL AL930712             [GCAGAATCCCCCGAGGTTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGTCGAAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGACTGGAACGATAACGATTGAGCGATTTAAACGAATGTGTA]
[+] EMBL BX601653             [                           TGACCGCTACAAGGGACACAAAGTTTCTTAAACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGGAAGCGACAGAAATGTTTAACAAA                                                                                                                                                                     ]
[+] EMBL BX611952             [                                                                                                      ACCAACCATCTTCGAACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAG                                                                                                                                                                                             ]
[+] EMBL BX618522             [                                                                                                                                                                                                                                                                                                                TCGGGTATCCCGGGGCGGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGCCGAGG                                                                                                                                                                                            ]




>consensus_9756#2
GCAGAATCCCCCGAGGTTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTAAAC
AGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGAACG
CGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACATCG
CCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGCTCT
GTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCGTGG
TGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAACAA
GCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTCGGC
CGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAACAT
GACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGTCGA
AGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGACTGGAACGATAACGATTGAGCGATTT
AAACGAATGTGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9756#0      CTGGTGAGATCGGATCAG-CTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTA 59
consensus_9756#2      ---GCAGAATCCCCCGAGGTTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTA 57
consensus_9756#1      -CCGCCCACGCGTCCGCAGCTCGAACGGAGTGACCGCTACAAGGGACACAAAGTTTCTTA 59
                         *      *         ****************************************

consensus_9756#0      AACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGA 119
consensus_9756#2      AACAGTGAAGATCTGTGCAGTGTAGAAAGGTGTAGAAGCAGAACAACCAACCATCTTCGA 117
consensus_9756#1      AACAGTGAAGATCTGTGCAGTGTAGAAAGGTTTAGAAGCAGAACAACCAACCATCTTCGA 119
                      ******************************* ****************************

consensus_9756#0      ACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACA 179
consensus_9756#2      ACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACA 177
consensus_9756#1      ACGCGCAACAAACGAGCAATCGTTTACTTTATTTGCTGGCGGTTACCATTGTATGGCACA 179
                      ************************************************************

consensus_9756#0      TCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGC 239
consensus_9756#2      TCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGC 237
consensus_9756#1      TCGCCCCGTCAGTGCAATGTCTCGTCAAGAATCTGAAATGATCAACCGTAGCCGCCGTGC 239
                      ************************************************************

consensus_9756#0      TCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCG 299
consensus_9756#2      TCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCG 297
consensus_9756#1      TCTGTCCTCGGGCGCGCTGACCGACTCGATCGAGAAGCTGCGACACATGTGCCTTGCCCG 299
                      ************************************************************

consensus_9756#0      TGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAA 359
consensus_9756#2      TGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGATGACGACGGCAA 357
consensus_9756#1      TGGTGCCTCGGGTATCCTGGGGCTGGGACGCTGTTTCCGCCGCATGGACGACGACGGCAA 359
                      ************************************************ ***********

consensus_9756#0      CAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTC 419
consensus_9756#2      CAAGCAGCTGAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACTGGGCTGGACATTTC 417
consensus_9756#1      CAAGCAGCTAAATCTGGAAGAGTTTATCAAGGGTCTGCACGACACCGGGCTGGACATTTC 419
                      ********* *********************************** **************

consensus_9756#0      GGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAA 479
consensus_9756#2      GGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGCTCGATTAA 477
consensus_9756#1      GGCCGAGGAAGCGACAGAAATGTTTAACAAATTTGATACGGACGGTAGCGGTTCGATTAA 479
                      *************************************************** ********

consensus_9756#0      CATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGT 539
consensus_9756#2      CATGACCGAGTTTCTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGGGTCAGCATTGT 537
consensus_9756#1      CATGACCGAGTTTTTGGTCGCGATTCGTCCAAACATGTCCGAGTCCAGAGTCAACATTGT 539
                      ************* ********************************** **** ******

consensus_9756#0      -GAAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGA-TGGAACGATAACGATTGAG-GA 596
consensus_9756#2      CGAAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGACTGGAACGATAACGATTGAGCGA 597
consensus_9756#1      -GCAGCAAGCTTTTGCAAAGCTGGACAAGACCGGCGA-TGGAACGATAACGATCGAG-GA 596
                       * ********************************** *************** *** **

consensus_9756#0      TTTAAA-GAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGG 655
consensus_9756#2      TTTAAACGAATGTGTA-------------------------------------------- 613
consensus_9756#1      TTTAAA-GAATGTGTACTCTGTGAAGAACCATCCACTGTACATCAGTGGAGAGGAGACGG 655
                      ****** *********                                            

consensus_9756#0      AGGATGTCATCTTGCGGAAGTATTTGGCAAACTTTGAGGAGAACGGCAATGTGGACGGCT 715
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      AGGAT------------------------------------------------------- 660
                                                                                  

consensus_9756#0      CCGTGACCAAAGAGGAGTTCCTCAACTACTACGCCGGATTGAGCGCCTCGATCGATTCGG 775
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      ATGCGTACTTTGACCTGATGATGCGCCAGGCGTTCAAACTGTAGACACGCCTGTGCCGTT 835
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      TACGTACAACTAATATTTAATCGTACCACTCCCCCATGGCCCATTTTTTATGTACCCAGC 895
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      ATACATCTTATGTATTAGATTGGTTCGATCAAACGACTACCGGAAGTGATTCCGAGTTTT 955
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      TACACACACATACACCACTCTAAACTACTACTGCCTTGAGAGATGAGCAGCAGGAGCAAG 1015
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      ATGAACCAAAGTGAGGAAACAGGACAACTCCTGCACGCCGGGAAGTCGTCGTGGCGAGCA 1075
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      GCTGATGATGAAACTGTGCTGCACCCGGAATGAGCAAGACACGCAAACGTTTTCCGATTG 1135
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      TTGTTGAAACACAAATCAATGCACAAGTGTTTACTTAACGATTAATAAACATACAGTTTT 1195
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      ATGTTTCCGAGTG 1208
consensus_9756#2      -------------
consensus_9756#1      -------------