|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9767#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1440 fasta sequence
[GCACATGCCTGCCTTTTGTTNGTATTTTTTTGGTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCTCGTCGATCGGCTTCTTGCGGGGCACGACGAGCGAGGTGCGGCCAGCGCTGCAACGCCCCTAGAATGTTGCCCAGTATGTGCAGCACCTC-GTCGGACGTTTTGAAATGGTACGCACTGTCCACGTTGTCGATGTGGTTGATCGCCTGCTGCAGATGGTTGGCCGCATCCTGCACCTGCTGTATCTTCCACGGGTAGTCCTGGGTGATGGAGGTGCGCTGGATCTGTTGCTGCTGCCGCTGCACCTTAAAGTTGATGTCCGCATGCGTTATGCTGTCCCCGGTAAGCGTGACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACAAACTTGTCCTGCTTCTTGCCCTCGTTACCGTACAGCGGGACCGGAAATCGGTGGGCACACTCCACCAGGATAACGTGCAGCTGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTTAGGGCTTCCTCCTTCTC-GCAGTCTGCCATCTTCT-GGCCTACTTTTCGCTGTGGCGGCGGTCGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC-ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTTTGGGGGCAAACCTTTGCTCCTTTTGCTGCTGCTGCTGCTGCCGG]
[+] EMBL BX466694 [GCACATGCCTGCCTTTTGTTNGTATTTTTTTGGTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCTCGTCGATCGGCTTCTTGCGGGGCACGACGAGCGAGGTGCGGCCAGCGCTGCAACGCCCCTAGAATGTTGCCCAGTATGTGCAGCACCTCGGTCGGACGTTTTGAAATGGTACGCAC ]
[-] EMBL AGA283789 [ AGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCTCGTCGATCGGCTTCTTGCGGGGCACGAC ]
[+] EMBL AGA285454 [ ATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAG ]
[-] EMBL AGA284158 [ CGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCTCGTCGATCGGCTTCTTGCGGGGCACGAC ]
[-] EMBL AGA280370 [ ATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGGTGCGGCTCTTCATCAGCTCGTCGATCGGCATCTTGCGGGGCACGAC ]
[+] EMBL AGA284573 [ GCCCCTAGAATGTTGCCCAGTATGTGCAGCACCTC GTCGGACGTTTTGAAATGGTACGCACTGTCCACGTTGTCGATGTGGTTGATCGCCTGCTGCAGATGGTTGGCCGCATCCTGCACCTGCTGTATCTTCCACGGGTAGTCCTGGGTGATGGAGGTGCGCTGGATCTGTTGCTGCTGCCGCTGCACCTTAAAGTTGATGTCCGCATGCGTTATGCTGTCCCCGGTAAGCGTGACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACAAACTTGTCCTGCTTCTTGCCCTCGTTACCGTACAGCGGGACCGGAAATCGGTGGGCACACTCCACCAGGATAACGTGCAGCTGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTTAGGGCTTCCTCCTTCTC GCAGTCTGCCATCTTCTGGGCCTA ]
[+] EMBL AGA283566 [ CCCCTAGAATGTTGCCCAGTATGTGCAGCACCTC GTCGGACGTTTTGAAATGGTACGCACTGTCCACGTTGTCGATGTGGTTGATCGCCTGCTGCANATGGTTGGCCGCATCCTGCACCTGCTGTATCTTCCACGGGTAGTCCTGNGTGATGGAGGTGCGCTGGATCTGTTGCTGCTGCCGCTGCACCTTAAAGTTGATGTCCGCATGCGTTATGCTGTCCCCGGTAAGCGTGACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACANACTTGTCCTGCTTCTTGCCCTCGTTACCGTACAGCGGGACCGGAAATCGGTGGGC ]
[-] EMBL BM579566 [ TGCGTTATGCTGTCCCCGGTAAGCGTGACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACAAACTTGTCCTGCTTCTTGCCCTCGTTACCGTACAGCGGGACCGGAAATCGGTGGGCACACTCCACCAGGATAACGTGCAGCTGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTTAGGGCTTCCTCCTTCTC GCAGTCTGCCATCTTCT GGCCTACTTTTCGCTGTGGCGGCGGTCGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTTTGGGGGCAAACCTTTGCTCCTTTTGCTGCTGCTGCTGCTGCCGG]
[-] EMBL BX626239 [ CAGCGGGACCGGAAATCGGTGGGCACACTCCNCCAGGATAACGTGCAGCTGCTTCAGCACNGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCCGCAGATTTAGGGCTTCCTCCTTCTC GCAGTCTGCCATCTTCT GGCCTACTTTTCGCTGTGGCGGCNGTCGCATATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGATGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTANGAAGATCTGCTCCAGATAGCGCCNCCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTTT ]
[-] EMBL BX622508 [ ACTCCACCAGGATAACGTGCAGCTGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTTAGGGCTTCCTCCTTCTC GCAGTCTGCCATCTTCT GGCCTACTTTTCGCTGTGGCGGCGGTCGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAATGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTTTGG ]
[-] EMBL BX620913 [ TGCAGATTTAGGGCTTCCTCNTTCTCGGCAGTCTGCCATCTTCT GGCNTACTTTTCGCTGTGGCGGCGGTCGCCTATTGTNCGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACNCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTA ]
[-] EMBL AGA285932 [ GGCGGTCGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGCAACACTGCCGTCGTCGCTGGCGG ]
[-] EMBL AGA284855 [ AGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAAT ]
consensusID : consensus_9767#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1227 fasta sequence
[ATGTTAGTACAGTTTTCTTTCGGTTTGCGTGTAGATTTATAATTTTGGCATACTAATTCTACGGTTAGGAATATTGTTGGCTTAAGTTATCGCATTCGCTCAATGTGTGTATTATGTTATCCTTTCTGCCAATTTAGATAAGTACAGATTACACCTTTTCGAAATAGAAAGGAAAAGGACTGGGTTTTCAGGGACATTTCTACTGACTTTGTTCACAACTAACCGATTGAATGATGATTCGAACACACACTGCCAATTACTTCCTTGTATATCTCGATTTAGTAACGATCAAATGTATTGCTGCATCCCTTCAAATCTCCTTTCCGCAAAATCATGGCACTAAGGAATCGAATTTTGTGAAAGGAGCAAAACCTGATTGGACTACCAGCGCGGTTGTCGATTATACACAACACGAAAACCTCGAATACGCTTGATGAAACAGGTTTTTTTTGGATAGTACTTACAGGCTAATGCAATAACAACGGGATTAGCGCTTTTTGTGTTGATTGAATAATAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTAGGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGACCGTGTGGTATATTTAACTATCCTTTT--TTTTTTTT--GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC-TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGC-GACAGCGCCTTCATGTTGCGGCTCTTCATCAGC-TCGTCGATC-GGCTTCT-TG-CGGGGCACGACGAGCGAGGTGCGGCCGCGCTGCAACGCACATAGAATGTTGCCCAGTAAGGCAGCA]
[+] EMBL AGA282071 [ATGTTAGTACAGTTTTCTTTCGGTTTGCGTGTAGATTTATAATTTTGGCATACTAATTCTACGGTTAGGAATATTGTTGGCTTAAGTTATCGCATTCGCTCAATGTGTGTATTATGTTATCCTTTCTGCCAATTTAGATAAGTACAGATTACACCTTTTCGAAATAGAAAGGAAAAGGACTGGGTTTTCAGGGACATTTCTACTGACTTTGTTCACAACTAACCGATTGAATGATGATTCGAACACACACTGCCAATTACTTCCTTGTATATCTCGATTTAGTAACGATCAAATGTATTGCTGCATCCCTTCAAATCTCCTTTCCGCAAAATCATGGCACTAAGGAATCGAATTTTGTGAAAGGAGCAAAACCTGATTGGACTACCAGCGCGGTTGTCGATTATACACAACACGAAAACCTCGAATACGCTTGATGAAACAGGTTTTTTTTGGATAGTACTTACAGGCTAA ]
[-] EMBL BX621065 [ ACCAGCGCGGTTGTCGATTATACACACCACGAAACCCTCGAATACGCTTGATGAAACAGGTTTTTTTTGGATAGTACTTACAGGCTAATGCAATAACAACGGGATTAGCGCTTTTTGTGTTGATTGAATAATAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTAGGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGACCGTGTGGTATATTTAACTATCCTTTT TTTTTTTT GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGG ]
[-] EMBL BX606414 [ CGATTATACACAACACGAAAACCTCGAATACGCTGGATGAAACAGGTTTTTTTTGGATAGTACTTACAGGCTAATGCAATAACAACGGGATTAGCGCTTTTTGTGTTGATTGAATAATAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTAGGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGACCGTGTGGTATATTTAACTATCCTTTT TTTTTTTT GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGAT GCTAAATCTTCTGGCAGGTTCGGC GACAGCGCCTTCATGTTGCGGCTCTTCATCAGC TCGTCGATC GGCTTCT TG CGGGGCACGACGAGCGAGGTGCGGCCGCGCTGCAACGCACATAGAATGTTGCCCAGTAAGGCAGCA]
[-] EMBL BM637880 [ CAGGCTAATGCAATAACAACGGGATTAGCGCTTTTTGTGTTGATTGAATAATAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTAGGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGACCGTGTGGTATATTTAACTATCCTTTT TTTTTTTT GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGC GACAGCGCgg ]
[+] EMBL BX466734 [ ctcaCTTTTCCTGTGTTGTANGTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCGTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCNGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCGTCGTCGATCGGGATTCTNAGCCGGGGCACGACGAGCGAGGTGCGGCCGCGnct ]
[+] EMBL AGA285080 [ T TTTTTTTT GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTA ]
consensusID : consensus_9767#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence
[CCGGGAACCGGTCCGAGAGACGCGTACATCCACTAGGCGCTCTGGTGGGGCTCTGTGGACCTGAGTAGTGCGCGCTGTCCATGATGGCACTGTAGTTCAAATCAATTGTCGTATTCGAATGGTCGAAATAGTGTTCTTTTGCGGCCAAATAGACGAGTGTCTTGTGTGTTGTGTATACACGAAGAATCGAACCAGCGCCGGTTATCATCAACGAAGGTCGGCGGAGACACACATACTACACCCCTGCTCCCCGTGTGCCGTTGTTTATCGTGCTGTTGATTTTGATAATTATCGAACCAAATTTTTGAGCAAACGCACGAGCCGGGCCGCACAAGATCACGCGGTCCAAACGGTCCAAAAACGGAACGGCCCACAGCGGGCAGTGTGGATGCGCGACCGATCCAGAGGTGTTGCGTTCCCGTGTTGGGGTGATTGGAATTTCACGACCAGGACAAGGTTGCAAATTGAACAAGATTAAACCAGGGGACGGGTGTGCGGTATTCAGGTGAAAGCATTCCTTGACTGATTGGAGGACGCTTCTTCAACCAGGCACTCAACTCAGCTGGCCGCAAATGTTGCGATTCAGCGGATCGAACTGGTTCACCAGACCACACTCCCGCCGGAAGAGTGGGAAAAAAGTAAAGGTAACCTTCTCGGACCAGCTCGACACG]
[+] EMBL BM644915 [CCGGGAACCGGTCCGAGAGACGCGTACATCCACTAGGCGCTCTGGTGGGGCTCTGTGGACCTGAGTAGTGCGCGCTGTCCATGATGGCACTGTAGTTCAAATCAATTGTCGTATTCGAATGGTCGAAATAGTGTTCTTTTGCGGCCAAATAGACGAGTGTCTTGTGTGTTGTGTATACACGAAGAATCGAACCAGCGCCGGTTATCATCAACGAAGGTCGGCGGAGACACACATACTACACCCCTGCTCCCCGTGTGCCGTTGTTTATCGTGCTGTTGATTTTGATAATTATCGAACCAAATTTTTGAGCAAACGCACGAGCCGGGCCGCACAAGATCACGCGGTCCAAACGGTCCAAAAACGGAACGGCCCACAGCGGGCAGTGTGGATGCGCGACCGATCCAGAGGTGTTGCGTTCCCGTGTTGGGGTGATTGGAATTTCACGACCAGGACAAGGTTGCAAATTGAACAAGATTAAACCAGGGGACGGGTGTGCGGTATTCAGGTGAAAGCATTCCTTGACTGATTGGAGGACGCTTCTTCAACCAGGCACTCAACTCAGCTGGCCGCAAATGTTGCGATTCAGCGGATCGAACTGGTTCACCAGACCACACTCCCGCCGGAAGAGTGGGAAAAAAGTAAAGGTAACCTTCTCGGACCAGCTCGACACG]
consensusID : consensus_9767#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 653 fasta sequence
[CCGGAATTAGCTGCGTCGTATAATATATATAGGTGCACCGCGTGTATACTTGATGTTTGTTATTATTCAATCAACACAAAAAGCGCTAATCCCGTTGTTATTGCATTAGCCTGTAAGCACTATCCAAAAACAAAAATACCTGTTTCATCAATCGTATTCGAGGTTTTCGTGTTGTGTATAATCGACAACCGCGCCGGTATTCCAATCAGGTTTTGCTCCTTTCACAAAATTCGATTCCTTAGTGCCATGATTTTGCGGAAAGGAGACTTTAAGCGATGCAGCAATACATTTGATCGTTACTAAATCGAGATATACAAGGAAGTAATTGGCAGTGTGCGTGTTTGTGTGTTCGAATCACCATTCAATCGGTTAGTTGTGAACAAAGTCAGTAGAAATGTCCCTGAAACCCCAGTCCTTTTCCTTCCTATTTCGAAAAGGTGTAATCTGTACTTATCTAAATTGGCAGAAAGGATAACATAATACACACATTGGGCGAATGCGATAACTTAAGCCAACAATAATCCTAACCGTAGAATTAGTCTGCCAAAATTATAAATCTACACGCAAACCGAAAGAAAACTATATTAACATCTGGGCTGGAGAAAAAAAAACCCACTGAGGCACAACAGATCGTCGTTTACAACACAAAACAT]
[+] EMBL BM588521 [CCGGAATTAGCTGCGTCGTATAATATATATAGGTGCACCGCGTGTATACTTGATGTTTGTTATTATTCAATCAACACAAAAAGCGCTAATCCCGTTGTTATTGCATTAGCCTGTAAGCACTATCCAAAAACAAAAATACCTGTTTCATCAATCGTATTCGAGGTTTTCGTGTTGTGTATAATCGACAACCGCGCCGGTATTCCAATCAGGTTTTGCTCCTTTCACAAAATTCGATTCCTTAGTGCCATGATTTTGCGGAAAGGAGACTTTAAGCGATGCAGCAATACATTTGATCGTTACTAAATCGAGATATACAAGGAAGTAATTGGCAGTGTGCGTGTTTGTGTGTTCGAATCACCATTCAATCGGTTAGTTGTGAACAAAGTCAGTAGAAATGTCCCTGAAACCCCAGTCCTTTTCCTTCCTATTTCGAAAAGGTGTAATCTGTACTTATCTAAATTGGCAGAAAGGATAACATAATACACACATTGGGCGAATGCGATAACTTAAGCCAACAATAATCCTAACCGTAGAATTAGTCTGCCAAAATTATAAATCTACACGCAAACCGAAAGAAAACTATATTAACATCTGGGCTGGAGAAAAAAAAACCCACTGAGGCACAACAGATCGTCGTTTACAACACAAAACAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9767#0 GCACATGCCTGCCTTTTGTTNGTATTTTTTTGGTTTGGTTTTCCTCCT--CTTATGCGTT 58
consensus_9767#1 ---------------ATGTTAGTACAGTTTTCTTTCGGTTTGCGTGTAGATTTATAATTT 45
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 CACCTTATATATCCTGCCGC-ATAAAGAGAGGTGGC--GGTTTGTTCGATCTGGTTG-TC 114
consensus_9767#1 TGGCATACTAATTCTACGGTTAGGAATATTGTTGGCTTAAGTTATCGCATTCGCTCAATG 105
consensus_9767#2 ------------------------CCGGGAACCGGTCCGAGAGA-CGCGTACATCCACTA 35
consensus_9767#3 ---------------------------------------------------CCGGAATTA 9
*
consensus_9767#0 TGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACAT 174
consensus_9767#1 TGTGTATTATGTTATCCTTTCTGCCAATTTAGATAAGTACAGATTACACCTTTTCGAAAT 165
consensus_9767#2 GGCGCTCTG-GTGGGGC--TCTGTGGACCTGAGTAG-TGCGCGCTGTCCATGATGGCACT 91
consensus_9767#3 GCTGCGTCGTATAATATATATAGGTGCACCGCGTGTATACTTGATGTTTGTTATTATTCA 69
* * *
consensus_9767#0 GGTACGCAACCGCTGGCTGAGCGGACCCGG-CATCAGTAG-GACAGTGCTGACGG-TGAG 231
consensus_9767#1 AGAAAGGAAAAG--GACTGGGTTTTCAGGGACATTTCTACTGACTTTGTTCACAA-CTAA 222
consensus_9767#2 GTAGTTCAAATC--AATTGTCGTATTCGAATGGTCGAAATAGTGTTCTTTTGCGG-CCAA 148
consensus_9767#3 ATCAACACAAAA--AGCGCTAATCCCGTTGTTATTGCATTAGCCTGTAAGCACTATCCAA 127
* * * * *
consensus_9767#0 CG---CGATCCAACGGTGAA--GTCCTTATACTGCGAGAATACTGATATCTTATCCTTCA 286
consensus_9767#1 C----CGATTGAATGATGATTCGAACACACACTGCCA-ATTACTTCCTTGTATATCTCGA 277
consensus_9767#2 ATAGACGAGTGTCTTGTGTGTTGTGTATACACGAAGA-ATCGAACCAGCGCCGGTTATCA 207
consensus_9767#3 AAACAAAAATACCTGTTTCATCAATCGTATTCGAGGT------TTTCGTGTTGTGTATAA 181
* * * * *
consensus_9767#0 GCTGCTGGCA--CAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGG 344
consensus_9767#1 TTTAGTAACGATCAAATGTATTGCTGCATCCCTTCAAATCTCCTTTCCGCAAAATCATGG 337
consensus_9767#2 TCAACGAAGG-TCGGCGGAGACAC-ACA-TACTACACCCCTGCTCCCCGTGTGCCGTTGT 264
consensus_9767#3 TCGACAACCG--CGCCGGTATTCCAATCAGGTTTTGCTCCT----TTCACAAAATTCGAT 235
* * * * *
consensus_9767#0 T-ACGGAGCACTCCGCCT----GGCACGAGTCGAACTTCATCGTGC--CCTGGAAGTTGG 397
consensus_9767#1 C-ACTAAGGAATCGAATTTTGTGAAAGGAGCAAAACCTGATTGGACTACCAGCGCGGTTG 396
consensus_9767#2 TTATCGTGCTGTTGATTTT---GATAATTATCGAACCAAATTTTTGAGCAAACGCACGAG 321
consensus_9767#3 TCCTTAGTGCCATGATTTT---GCGGAAAGGAGACTTTAAGCGATGCAGCAATACAT--- 289
* * * *
consensus_9767#0 TCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAAT 457
consensus_9767#1 TCGATTA-TACACAACACGAAAACCTCGAATACGCTTGATGAAACAGGTTTTTTTTGGAT 455
consensus_9767#2 CCGGGCCGCACAAGATCACGCGGTCCAAACGGTCCAAAAACGGAACGGCCCACAGCGGGC 381
consensus_9767#3 TTGATCGTTACTAAATCGAGATATACAAGGAA---GTAATTGGCAGTGTGCGTGTTTGTG 346
** * *
consensus_9767#0 CTT-CTGGCAGGTTCG-GCGACAGCGCCTTCATGTTGCGGCTCTT-CATCAGCTCGTCGA 514
consensus_9767#1 AGTACTTACAGGCTAATGCAATAACAACGGGAT-TAGCGCTTTTTGTGTTGATTGAATAA 514
consensus_9767#2 AGTGTGGATGCGCGAC-----CGATCCAGAGGTGTTGCGTTCCCGTGTTGGGGTGATTGG 436
consensus_9767#3 TGTTCGAATCACCATT--CAATCGGTTAGTTGTGAACAAAGTCAGTAGAAATGTCCCTGA 404
* * *
consensus_9767#0 TCGGCTTCTTGCGGGGCACG-ACGAGCGAGGTGCGGCCAGCGCTGCAACGCCCCTAGAAT 573
consensus_9767#1 TAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTA- 573
consensus_9767#2 AATTTCACGACCAGGACAAG---GTTGCAAATTGAACAAG----ATTAAACCAGGGGACG 489
consensus_9767#3 AACCCCAGTCCTTTTCCTTCCTATTTCGAAAAGGTGTAATCTGTACT-TATCTAAATTGG 463
* *
consensus_9767#0 GTTGCCCAGTATG----TGCAGCACCTCGTCGGACGTTTTGAAATGGTACG---CACTGT 626
consensus_9767#1 GGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGA 633
consensus_9767#2 GGTGTGCGGTATTCAGGTGAAAGCATTCCTTGACTGATT----GGAGGACGCTTCTTCAA 545
consensus_9767#3 CAGAAAGGATAACATAATACACACATTGGGCGAATGCGATAACTTAAGCCAAC-AATAAT 522
** * * * *
consensus_9767#0 CCACGTTGTCGATGTGGTTGATCGCCTGCTGC---AGATGGTTGGCCGCATCCT--GCAC 681
consensus_9767#1 CCGTGTGGTATATTTAACTATCCTTTTTTTTTTTTGTTTGGTTTTCCTCCTCTTATGCGT 693
consensus_9767#2 CCAGGCACTCAACTCAGCTGGCCGCAAATGTT-----GCGATTCAGCGGATCGAACTGGT 600
consensus_9767#3 CCTAACCGTAGAATTAGTCTGCCAAAATTATA------AATCTACACGCAAACCGAAAGA 576
** * * * * *
consensus_9767#0 CTGCTGTAT--CTTCCACGGGTAGTCCTGGGTGATGGAGGTGCGCTGGATCTG-TTG-CT 737
consensus_9767#1 TCACCTTAT--ATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCT 751
consensus_9767#2 TCACCAGACC-ACACTCCCGCCGGAAGAGTGGGAAAAAAGTAAAGGTAACCTTCTCGGAC 659
consensus_9767#3 AAACTATATTAACATCTGGGCTGGAGAAAAAAAAACCCACTGAGGCACAACAGATCG-TC 635
* * * * * * *
consensus_9767#0 GCTGCCGCTGCACCTTAAAGTTGATGTCCGCATG-CGTTATGCTGTCCCCGGTAAGCGTG 796
consensus_9767#1 GCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACAT- 810
consensus_9767#2 CAGCTCGACACG------------------------------------------------ 671
consensus_9767#3 GTTTACAACACAAAACAT------------------------------------------ 653
*
consensus_9767#0 ACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACAAACTTGTCCTGCTTCTTGCCC 856
consensus_9767#1 --GGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGG--ACAGTGCTGACGGTGA 866
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 TCGTTACCGTACAGCGGGACCGGAAATCGGTGGGCACACTCCACCAGGATAACGTGCAGC 916
consensus_9767#1 GCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACT--GATATCTTATCCTTCAGC 924
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 TGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTT 976
consensus_9767#1 TGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGG---T 981
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 AGGGCTTCCTCCTTCTCGCAGTCTGCCATCTTCTGGCCTACTTTTCGCTGTGGCGGCGGT 1036
consensus_9767#1 ACGGAGCACTCCGCCTGGCACGAGTCGAACTTC------ATCGTGCCCTG-GAAGTTGGT 1034
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 CGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGC 1096
consensus_9767#1 CAGCTG--GTACGCGACAAAGAT----CAGCTTGTGGCTCTGGATGTAGAAGCTGATCGC 1088
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 CGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTG 1156
consensus_9767#1 TA-AATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCAT-------- 1139
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 GGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTC 1216
consensus_9767#1 --CAGCTCGTCGATCGGCTTC---TTGCGGGGCACGAC--GAGCG-AGGTGCGGCCGCGC 1191
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 GGACTCGTAGACGGCACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAG 1276
consensus_9767#1 TGCAACGCACATAGAATGTTGCCCAGTAAGGCAGCA------------------------ 1227
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 GTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGAT 1336
consensus_9767#1 ------------------------------------------------------------
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 CCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTT 1396
consensus_9767#1 ------------------------------------------------------------
consensus_9767#2 ------------------------------------------------------------
consensus_9767#3 ------------------------------------------------------------
consensus_9767#0 TGGGGGCAAACCTTTGCTCCTTTTGCTGCTGCTGCTGCTGCCGG 1440
consensus_9767#1 --------------------------------------------
consensus_9767#2 --------------------------------------------
consensus_9767#3 --------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||