|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9770#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1340 fasta sequence
[CCGCTACATTTATAAAAGGACCATCAGGAGCTTATATTAAGGGAGGTTTATTTGAAACTACCAGGAAAAAATAAAAATACTTACCCATGAAGCGGTAAAATTAAATCAAATGCGTCAGCCAATGTTTACGTATAGGTTTGACGTTTGTCTGCGATAGCAAAGGGTTGCTGTACCGTTATCATTTCACCATCCTCTTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG-GTGCACGTGGAGTTCAATCGGCCCGATCGTATG-AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG-CCGGGT-GGTGGTACT--GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA-TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG--AGGAGGT-GGGTCGACGGGGCCG-C-CTGCTCGAGGGCACCATCAAGCT-GTACCAGGACTGCATCAGC-TCGCTGGAGCACTGCTACAAGCCGGT-CATCGTGGCGGTACATTCGGCTTG-CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT-GG-TTCTCGC-TGAAGGAGGTGGACATCGGGC-TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCCGGAGTGCGAATAAAGTGATGGTACCGACGAGGGCCTCG]
[+] EMBL BM612923 [CCGCTACATTTATAAAAGGACCATCAGGAGCTTATATTAAGGGAGGTTTATTTGAAACTACCAGGAAAAAATAAAAATACTTACCCATGAAGCGGTAAAATTAAATCAAATGCGTCAGCCAATGTTTACGTATAGGTTTGACGTTTGTCTGCGATAGCAAAGGGTTGCTGTACCGTTATCATTTCACCATCCTCTTCCCTCTCGGTTGATACACGGATCAGCTGATTCGAACCTTCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTG ]
[+] EMBL CNS09P0N [ CGTTATCATTTCACCATCCTCTCCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAGCCTTCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCCGTTTCATTTGCCACCATGAACAAACTTGCATTTAGTGCCGTTTTTTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACAAATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAAACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTCGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGCGCCATCG AGGAGGT GGGTCAACGAGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGACGTGCGGTACTGCACGCGGGACGCCTGGG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGA CTTGCCTTTACCGCGCGGAAGTTCGCTAGTGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACGAAGAAAAACATCGTCTACTCGGCGGACCACACGG ]
[+] EMBL BM596672 [ ccgCGTTATCATTTCACCATCCTCTTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTGCCGTTTTTTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGACCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAAACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTCGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATTAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGTTTG CATCGGGGCC ]
[+] EMBL CNS08CQR [ CCTCTTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCTTCGTTGCTCTTCGTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAA ]
[+] EMBL BM600369 [ ccgCTCTTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGACGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAAGAGGTGGACATCGGGC TGGCG ]
[+] EMBL CNS08Z0R [ TTCCCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCTTCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGGGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGA ]
[+] EMBL BM589998 [ ccgCTCTCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGC ]
[+] EMBL BM596842 [ cCGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCGA AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGTCCATCGTGGCGGTACATTCCGCTTGACATCGGGGCCGGCCTTAACCTGATTA ]
[+] EMBL BM608946 [ ccgGGTTGATACACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCCGGGTGGGTGGTACTG GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCGA AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGACGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGCTTGAAGGAGGTGGACATCGGGCTTGGCGGgc ]
[+] EMBL CNS08PBF [ ATACACGGTTCAGCTGATTCGAACCTTCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGAAAGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GGTTTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGAC ]
[+] EMBL BM576789 [ ccgCACGGTTCAGCTGATTCGAACCATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCCGGGTGGGTGG ACTTGGTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATATTGATGAAGCTGGGCCAGGAGATGGGAGCCATCGGAAGGAGGTCGGGTCGACGGGGCCGCC CTACTCGAGGGCACCATCAAGCTGGTACCAG ]
[+] EMBL AL929915 [ cgaggttaATTCGAA CATCGTTGCTCTCCCTACGGATCAAAGTTCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTGNTTGCACGTGGAGTTCAATCGGCCCGATCGTATGTAACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGGTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCG CGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT CGGTCGACGGGGCCG C CTACTCGAGGGCACCATCAAGCT GTACCAGGATTGCATCAGCNTCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGATGACGTGCGGTACTGCACGCGGGACGCCT ]
[+] EMBL AL930288 [ ccgaggttnATC AAGTCCAGCATT AAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCCATCG AGGAGGT CGGTCGACGGGGCCG CGCTACTCGAGGGCACC ]
[+] EMBL BX622573 [ AGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGANGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCc ]
[-] EMBL CNS08PBG [ TGCGCCGCGGCCAACGCTTCTACCGATGCGTCGACGAAGTACAACTTCAAAAAACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGAACGGAGATCAAGAACTGCTTCGACCAGCTGAACAACGATCCCAACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGTACTTTTTCAGC TCGCTGGAGAACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGAACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCCGGAGTGCGAATAAAGTGAT GTACCGACGAG ]
[-] EMBL CNS08CQS [ ATGCGTCGACGAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTGGAGTTCAATCGGCCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGAACTGCTTCGACCAGCTGCACAACGATCCCAACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGAACTGCATCAGC TCGCTGGAGAACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCA CGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCC ]
[-] EMBL CNS09P0O [ AGAACAACTTCAAAAAACTGAAACTGTCCACGCCGAGCCCGTTCGTG GTGCACGTCGAGTTCAATCGGCCCGATCGTATG AACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGAACTGCTTCGACCAGCTGAACAACGATCCCAACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGCGCCATCG AGGAGGT GGGTCAACGAGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGAACTGCATCAGC TCGCTGGAGAACTGCTACAAGCCGGT CATCGTGGCGGTACATTCCGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGACGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGAACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGGGCTTGCCTTTACCGCGCGGAAGTTCGCTAGTGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACGAAGAAAAACATCGTCTACTCGGCGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTTAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATG GTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAATGCAATGCCGGAGTGCGAATAAAGTGATGGTACCGACGA ]
[+] EMBL BX616699 [ CCCGATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGC GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCG ]
[+] EMBL BX611581 [ GATCGTATG AACGCATTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGC GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCG ]
[-] EMBL CNS08Z0S [ TCAAGAACTGCTTCGACCAGCTGCACAACGATCCCGACTG CCGGGT GGTGGTACT GTCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATA TGATGAAGCTGGGCCAGGAGATGGGAGCAATCG AGGAGGT GGGTCGACGGGGCCG C CTGCTCGAGGGCACCATCAAGCT GTACCAGGACTGCATCAGC TCGCTGGAGCACTGCTACAAGCCGGT CATCGTGGCGGTACATTCGGCTTG CATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGGTACTGCACGCGGGACGCCT GG TTCTCGC TGAAGGAGGTGGACATCGGGC TGGCGGCGGACGTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGGGCTGGGTGCGGGAGCTTGCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGGCTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCGAGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCACACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAAGATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGTAACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCCGGAGTGCGAATAAAGTGATGGTACCGACGAGGGCCTCG]
consensusID : consensus_9770#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 422 fasta sequence
[GATCGCCCCAGGTGNTCAGCTGATTCGAACATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTGGTGCACGTGGAGTTCAATCGGCCCGATCGTATGAACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCGGGTGGTGGTACTGTCCGGCGGTTCCTCCAAACACTTTACC]
[+] EMBL AL932868 [GATCGCCCCAGGTGNTCAGCTGATTCGAACATCGTTGCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCCACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCAGGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACCGATGCGTCGACAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTGGTGCACGTGGAGTTCAATCGGCCCGATCGTATGAACGCGTTCAATCGGCAGCTGTGGACGGAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCGGGTGGTGGTACTGTCCGGCGGTTCCTCCAAACACTTTACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9770#0 CCGCTACATTTATAAAAGGACCATCAGGAGCTTATATTAAGGGAGGTTTATTTGAAACTA 60
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 CCAGGAAAAAATAAAAATACTTACCCATGAAGCGGTAAAATTAAATCAAATGCGTCAGCC 120
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 AATGTTTACGTATAGGTTTGACGTTTGTCTGCGATAGCAAAGGGTTGCTGTACCGTTATC 180
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 ATTTCACCATCCTCTTCCCTCTCGGTTGATACACG-GTTCAGCTGATTCGAACCATCGTT 239
consensus_9770#1 -----------------------GATCGCCCCAGGTGNTCAGCTGATTCGAAC-ATCGTT 36
* * * ** * * *************** ******
consensus_9770#0 GCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCC 299
consensus_9770#1 GCTCTTCCTACGGATCAAAGTCCAGCATTAAAAAGGCTAAATTTTGCAGTTTCATTTGCC 96
************************************************************
consensus_9770#0 ACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCA 359
consensus_9770#1 ACCATGAACAAGCTTGCATTTAGTACCGTTTTCTCCACACTCAAAACGATGGCCCGTCCA 156
************************************************************
consensus_9770#0 GGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGCGCCGCGGCCAACGCTTCCACC 419
consensus_9770#1 GGAGCACCGGTTGCGCCACACATCGCACGTAATCTGTGTGCCGCGGCTAACGCTTCCACC 216
************************************** ******** ************
consensus_9770#0 GATGCGTCGACAAAGTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG 479
consensus_9770#1 GATGCGTCGACAA-GTACAACTTCAAGACACTGAAACTGTCCACGCCGAGCCCGTTCGTG 275
************* **********************************************
consensus_9770#0 GTGCACGTGGAGTTCAATCGGCCCGATCGTATGAACGCGTTCAATCGGCAGCTGTGGACG 539
consensus_9770#1 GTGCACGTGGAGTTCAATCGGCCCGATCGTATGAACGCGTTCAATCGGCAGCTGTGGACG 335
************************************************************
consensus_9770#0 GAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCGGGTGGTGGTACTG 599
consensus_9770#1 GAGATCAAGGACTGCTTCGACCAGCTGCACAACGATCCCGACTGCCGGGTGGTGGTACTG 395
************************************************************
consensus_9770#0 TCCGGCGGTTCCTCCAAACACTTTACCGCCGGCATCGATCTGTTCGATATGATGAAGCTG 659
consensus_9770#1 TCCGGCGGTTCCTCCAAACACTTTACC--------------------------------- 422
***************************
consensus_9770#0 GGCCAGGAGATGGGAGCCATCGAGGAGGTGGGTCGACGGGGCCGCCTGCTCGAGGGCACC 719
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 ATCAAGCTGTACCAGGACTGCATCAGCTCGCTGGAGCACTGCTACAAGCCGGTCATCGTG 779
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 GCGGTACATTCGGCTTGCATCGGGGCCGGCCTTAACCTGATTACGGCGGCTGATGTGCGG 839
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 TACTGCACGCGGGACGCCTGGTTCTCGCTGAAGGAGGTGGACATCGGGCTGGCGGCGGAC 899
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 GTTGGCGCACTGCAGCGGTTCCCGCGTGTCGTCGGAAATCAGAGCTGGGTGCGGGAGCTT 959
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 GCCTTTACCGCGCGGAAGTTCGCTAGCGATGAAGCGCACAGCCACGGGCTCGTATCGCGG 1019
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 CTGTTCGACAATCGGGAAGAGTTGCTGCAGGGTGCGATCAAGCTGGCGGAGGAGATCGCG 1079
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 AGCAAGAGCCCGATCGCGGTGCAGGGAACAAAGAAAAACATCGTCTACTCGACGGACCAC 1139
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 ACGGTGCAGGAAGGGCTCGATCATATCCGCGCTATTAACATGCTGAACTTGCAGAGTGAA 1199
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 GATTTCCTGAACGCGATCATGCTTCGCAGAGCAAGGAAACGCCGGTGTTTGCAAAGCTGT 1259
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 AACGGGAAGGAGGGCGGAGGGAACGCTTCGGAAAGGCAAGGCCGGAGTGCGAATAAAGTG 1319
consensus_9770#1 ------------------------------------------------------------
consensus_9770#0 ATGGTACCGACGAGGGCCTCG 1340
consensus_9770#1 ---------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||