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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9787#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 903 fasta sequence
[CCGCATCTGTCACAATACAGTCCGCCGCCCACGAGACC-CGTCGAGGTGGTTGACCAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC-CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG-AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG-CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAGAAGGGCGACGAGTACATCCTGAACGGGCAGAAGATGTGGATCACGAACGGTGGCGTCGCCAACTGGTACTTTGTGCTGGCCCGCACCAATCCCGACCCGAAGTGTCCCGCCTCGAAAGCGTTCACCGGGTTCATCGTGGAGCGCGATACGCCCGGCCTGACGCCCGGGCCGCAAGGAGCAAAACATGGGCCAGCGGGCGTCCGACACGCGCGGCATCACGTTC]
[+] EMBL BM652778 [CCGCATCTGTCACAATACAGTCCGCCACACACGAGAGC CGTCGAGGTGGTTGACCAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAGGGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGC ]
[+] EMBL BM586512 [ CCGCGGACGCGTGG GGTCGAGGTGGTTGACCAGTCGCGTTGCGCCGCCGTAGTTATTAAAGCAAAGTGATCGGAACGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGCGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCAAGCGGGCTGGGACAAACACCTGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCGCCCGGCTCGGACGTGAACGGGGTGAGAA ]
[+] EMBL BM595189 [ CCGCCCACGCGTCCGCGTCGAGGTGGTTGACCAGTCGCGTTGCGCCGCCGTAGTTATTAAAGCAAAGTGATCGGAACGTTCTATTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGTATGCCGTGCGCTGTCGTCCAAGGTGGACCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACAAGCAGCGCGAGATCGTGGACCTGACGAAGAAGTTTGTGCTCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCAAGCGGGCTGGG ]
[+] EMBL BM616448 [ CCGCACACGAGAGC CGTCGAGGTGGTTGACCAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAG ]
[+] EMBL BM650724 [ cgaCCCACGCG TC CG CGAGGTGGTTGACCAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGGAAACCGCTCGTGGCGGCCTACTGCGTCACCGA ]
[+] EMBL BM610978 [ CCGACGAGAGC CGTCGAGGTGGTTGACCAGTCGCGTTGCGCCGCCGTAGTTATTAAAGCAAAGTGATCGGAACGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGCGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCAAGCGGGCTGGGACAAACACCTGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGC ]
[+] EMBL CNS09716 [ CC CGTCGAGGTGGTTGA CAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAACGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAAAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAGAAGGGCGACGAGTACATCCTGAACGGGCAGAAGATGTGGATCACGAACGGTGGCGTCGCCAACTGGTACTTTGTGCTGGCCCGCACCAATCCCGACCCGAAGTGTCCCGCCTCGAAAGCGTTCACCGGGTTCATCGTGGAGCGCGATACGCCCGGCCTGACGCCCGGGCCGCAAGGAGCAAAACATGGGCCAGCGGGCGTCCGACACGCGCGGCATCACGTTC]
[+] EMBL BM577158 [ CC GGTCGAGGTGGTTGACCAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAGAA ]
[+] EMBL BM588731 [ CC GGTCGAGGTGGTTGACCAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGC ]
[+] EMBL BM586347 [ CC GGTCGAGGTGGTTGACCAGTCGCGTTGCGCCGCCGTAGTTATTAAAGCAAAGTGATCGGAACGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGCGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCAAGCGGGCTGGGACAAACACCTGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAAC ]
[+] EMBL BM624083 [ C CG CGAGGTGGTTGACCAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAGAAGGGCGACGAGTACATCCTGAA ]
[+] EMBL BM612755 [ ccg CGTCGAGGTGGTTGACCAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAGA ]
[+] EMBL BM628045 [ ccGGTTGACCAGTCGCGTTGCGCCGCCGTAGTTATTAAAGCAAAGTGATCGGAACGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCTCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGCGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCAAGCGGGCTGGGACAAACACCTGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACG ]
[+] EMBL BM594336 [ ccgGGTTGACCAGTCGCGTTGCGCCGCCGTAGTTATTAAAGCAAAGTGATCGGAACGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGCGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCAAGCGGGCTGGGACAAACACCTGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAGAAGGGCGACGAGTACATCCTGAACGGGCAGAAGATGTGGATCA ]
[+] EMBL CNS09K6G [ GGTTGA CAGTCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAACGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAAAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATCGGCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCAGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAGAAGGGCGACGAGTACATCCTGAACGGGCAGAAGATGTGGATCACGAAC ]
[+] EMBL BM587990 [ cCGTGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTTGTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGAAACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACGTTTCCTCGACCGGGCCCTGCTTTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTGACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGCGAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC CCGGCCGACATTGGTGGAACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACAGTTTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAACACCCGTCATCATTGCCGGCAACAAGGAGCAGCAGAAGAAGTACCTCGGCCGGCTGCTGGAGG AACCGCTCGTGGCGGCCTACTGCGTCACCGAGCCGGGCG CCGGCTCGGACGTGAACGGGGTGAGAACGCGCGCCGAAAAGAAGGGCGACGAGTACATCCTGAACGGGCAGAAGATGTGGATCA ]
consensusID : consensus_9787#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 663 fasta sequence
[CCCGCTCCGACCAGTCAGTCGTCCTAATGGTAGCGGTTTCCCATCTACGACCCACAAACAAACGAAAAACATAATTATGCGTCCGGTGGCATAGTGCACATGTTTTGGGAAAAGTTTCATCCAATGACAGCAGCGAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTAGAGAGATTGAACATCAATTTTGTTTACCAACAAAATACGATACCGAACGGTGGTCGTAGAGTTTGTGTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAGAAGCCATTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAAGCTCTACAAGAATATCCAAAGACATTACCGTGGAGGTTAATCGCACAAGGCCTGCTTGGTTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCCGCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTTGTTAACAACAAAACACACGACGGCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGATATTTACTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGACTACGAGAAGTTCCCGTACGGT]
[+] EMBL BM590854 [CCGGCTCCGACCAGTCAGTCGTCCTAATGGTAGCGGTTTCCCATCTACGACCCACAAACAAACGAAAAACATAATTATGCGTCCGGTGGCATAGTGCACATGTTTTGGGAAAAGTTTCATCCAATGACAGCAGCGAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTAGAGAGATTGAACATCAATTTTGTTTACCAACAAAATACGATACCGAACGGTGGTCGTAGAGTTTGTGTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAGAAGCCATTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAAGCTCTACAAGAATATCCAAAGACATTACCGTGGAGGTTAATCGCACAAGGCCTGCTTGGTTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCCGCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTTGTTAACAACAAAACACACGACGGCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGATATTTACTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGACTACGAGAAGTTCCCGTACGGT]
[+] EMBL BM634780 [ CCGCTCCGACCAGTCAGTCGTCCTAATGGTAGCGGTTTCCCATCTACGACCCACAAACAAACGAAAAACATAATTATGCGTCCGGTGGCATAGTGCACATGTTTTGGGAAAAGTTTCATCCAATGACAGCAGCGAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTAGAGAGATTGAACATCAATTTTGTTTACCAACAAAATACGATACCGAACGGTGGTCGTAGAGTTTGTGTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAGAAGCCATTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAAGCTCTACAAGAATATCCAAAGACATTACCGTGGAGGTTAATCGCACAAGGCCTGCTTGGTTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCCGCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTTGTTAACAACAAAACACACGACGGCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGATATTTACTACATGAGCGACAGCATCCAGTACTCGTCGTTCCGCGGTCCAGTCTACCGGGA ]
[+] EMBL BM625530 [ CCGCTCCGACCAGTCAGTCGTCCTAATGGTAGCGGTTTCCCATCTACGACCCACAAACAAACGAAAAACATAATTATGCGTCCGGTGGCATAGTGCACATGTTTTGGGAAAAGTTTCATCCAATGACAGCAGCGAAGTGTAGTGCGTTGTGGTGGTGAAAGTTTAGAGAGATTGAACATCAATTTTGTTTACCAACAAAATACGATACCGAACGGTGGTCGTAGAGTTTGTGTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAGAAGCCATTTAATGCCGGAACGAGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACTTGAAGCTCTACAAGAATATCCAAAGACATTACCGTGGAGGTTAATCGCACAAGGCCTGCTTGGTTGTTAGGAGAAACCGTACAAAAACACAAACCCATTTGAAAGGCCGCATTAGCAGCAGCCGCTTCGAAGGACCAAACGCGCGCTCTCTCTCTTTTTGTTAACAACAAAACACACGACGGCATCTTAGTATCCTTGGAAGCGGCAGACACCTCTCTATCCCGTCACCATGGATATTTACTACATGAGCGACAGC ]
consensusID : consensus_9787#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence
[CCGCCCACGCGTCCGCGATAATAGCATTGTGCATATAGATGAACCGTACTAAATAGTTACAATAGTTCTGCAAACCACTACAGCAATTGGTCAACTGTGAGATATCATTTGCAGTGAACCAACAAATAGCTACTTTGCCTTGTGTCATCGCTGGAAAAGCGGAAGAAGAAGAAGAAGAAAAACCAACAACTCAGCTCGAAGCTCCAAGACCCACAGTGCTTAGGTGTGGTTTTGTTTTGTCGAAATATAGGGACGTTCTTATCGGCAAAGAATTCCTGCGCTTACGAGACGGATGGCCTGTTTCTAACACTCAGATTAGGAAAATAACGGTATTATCCTCAAAAATATCGGACTAAACGTTATCCATCGTGTTCGTGTGTGCATCCAGCAGTAAATAAAAGGGTCCAAAAATGACCGGACGACTTCCAGCTTGTGTGATTGATGTAGGAACTGGGTACACGAAACTTGGGTTTGCAGCGAACAAGGAACCACAGTTCATCATCCCTTCCGCTATTGCGATCAAAGAGTCGGCCAAAGTAGGCGATCAAAGTGCACGCCGTGTGACCAAAGGAGTCGAGGGACTTGGATTTCTACATCGGCGATGAAGCGTTCGATGCGACTGGATACTCGGTGAAGTACCCCGTTCGCCATGGGCTGGTCGAA]
[+] EMBL BM595338 [CCGCCCACGCGTCCGCGATAATAGCATTGTGCATATAGATGAACCGTACTAAATAGTTACAATAGTTCTGCAAACCACTACAGCAATTGGTCAACTGTGAGATATCATTTGCAGTGAACCAACAAATAGCTACTTTGCCTTGTGTCATCGCTGGAAAAGCGGAAGAAGAAGAAGAAGAAAAACCAACAACTCAGCTCGAAGCTCCAAGACCCACAGTGCTTAGGTGTGGTTTTGTTTTGTCGAAATATAGGGACGTTCTTATCGGCAAAGAATTCCTGCGCTTACGAGACGGATGGCCTGTTTCTAACACTCAGATTAGGAAAATAACGGTATTATCCTCAAAAATATCGGACTAAACGTTATCCATCGTGTTCGTGTGTGCATCCAGCAGTAAATAAAAGGGTCCAAAAATGACCGGACGACTTCCAGCTTGTGTGATTGATGTAGGAACTGGGTACACGAAACTTGGGTTTGCAGCGAACAAGGAACCACAGTTCATCATCCCTTCCGCTATTGCGATCAAAGAGTCGGCCAAAGTAGGCGATCAAAGTGCACGCCGTGTGACCAAAGGAGTCGAGGGACTTGGATTTCTACATCGGCGATGAAGCGTTCGATGCGACTGGATACTCGGTGAAGTACCCCGTTCGCCATGGGCTGGTCGAA]
consensusID : consensus_9787#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence
[CCGCGGACGCGTGGGCGCTCATCTTGGATGCCTTTTTAATTAAATTCTCCTTTCTGCCTCATTCTGCCCCCTCCCCACTAAAGGATATCGAAGATCAGAAAAACCGTTTTAACGGTGAGCAGTTTCTCGAGATGAAGAAACAGGCAGCGAAAGAGTCGGGCAGCAGTAGTCTGGTGGGTCAGGGCGGTGGTACCCCCCTCAGCAGTCTGCCGGACGGAGGAGGAGTCGATGGCGAACAACCACCAGCGAAGGACAGCACGGAAGGAGCTGGCGCCGACGATAATAATAATAATAATGGTGCATCATCGGGCACCGTCAGTGCTGCAGCACAGATGGAAAAGATCGGTGCATGAAACACACATACACACACAGGCACGAGTCGTGTGACCTTTAACCTTCCGACTTGGGGGTGCTTCTTAAAATCCCCCCTACATCCGCCTGTTGCTGATAAGCACAAACGAATCGAACGCGGTTTTTTGGTTATGAGTTGGACGATGATTTCGAAATTTAAAACGAACTCCTAACATAAGTGTTGTGTACGTGTGTGTGTTGTCCTAATGCTCGCGGCATTAACACTGTTTCCCACGGTTCGCACTACACTTTCTTTCATTTTGATTTTTACATCCTATCCCAACACAATATCATTTAGCTGGTAAG]
[+] EMBL BM637829 [CCGCGGACGCGTGGGCGCTCATCTTGGATGCCTTTTTAATTAAATTCTCCTTTCTGCCTCATTCTGCCCCCTCCCCACTAAAGGATATCGAAGATCAGAAAAACCGTTTTAACGGTGAGCAGTTTCTCGAGATGAAGAAACAGGCAGCGAAAGAGTCGGGCAGCAGTAGTCTGGTGGGTCAGGGCGGTGGTACCCCCCTCAGCAGTCTGCCGGACGGAGGAGGAGTCGATGGCGAACAACCACCAGCGAAGGACAGCACGGAAGGAGCTGGCGCCGACGATAATAATAATAATAATGGTGCATCATCGGGCACCGTCAGTGCTGCAGCACAGATGGAAAAGATCGGTGCATGAAACACACATACACACACAGGCACGAGTCGTGTGACCTTTAACCTTCCGACTTGGGGGTGCTTCTTAAAATCCCCCCTACATCCGCCTGTTGCTGATAAGCACAAACGAATCGAACGCGGTTTTTTGGTTATGAGTTGGACGATGATTTCGAAATTTAAAACGAACTCCTAACATAAGTGTTGTGTACGTGTGTGTGTTGTCCTAATGCTCGCGGCATTAACACTGTTTCCCACGGTTCGCACTACACTTTCTTTCATTTTGATTTTTACATCCTATCCCAACACAATATCATTTAGCTGGTAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9787#1 ------------------------------------------------------------
consensus_9787#2 ------------------------------------------------------------
consensus_9787#0 CCGCATCTGTCACAATACAGTCCGCCGCCCACGAGACCCGTCGAGGTGGTTGACCAGTCG 60
consensus_9787#3 ------------------------------------------------------------
consensus_9787#1 --------------------------------------------------CCCGCTCCGA 10
consensus_9787#2 --------------------------------------------------------CCGC 4
consensus_9787#0 TGTTGCGCCGCTGTAGTTATTAAAGCAAAGTGATCGGAAGGTTCTAGTGGTTTTGCACTT 120
consensus_9787#3 ------------------------------------------------------------
consensus_9787#1 CCAGTCAGTCGTCCTA-ATGGT-AGCGGTTTCCCATCTACGACCCACAAACAAACGAAAA 68
consensus_9787#2 CCACGCGTCCGCGATA-ATAGC-ATTG--TGCATATAGATGAACCGTAC-TAAATAGTTA 59
consensus_9787#0 GTACACAGTCGTACCAGATACTCAACAAACTCACAACAATGGCACTGTCCCAGTTTATGA 180
consensus_9787#3 -----------------------------------CCGCGGACGCGTGGGCGCTCATCTT 25
* *
consensus_9787#1 ACATAATTATGCGTCCGGT-GGCA-TAGTGCACATGTTTTGGGAAAAGTTTCATCCAATG 126
consensus_9787#2 CAATAGTTCTGCAAACCAC-TACAGCAATTGGTCAACTGTGAGATATCATTTGCAGTGAA 118
consensus_9787#0 AACTGGCCGCACGTCCAGCATGCCGTGCGCTGTCGTCGAAGGCGGCCCCCGCACTGGACG 240
consensus_9787#3 GGATGCCTTTTTAATTAAA-TTCTCCTTTCTGCCTCATTCTGCCCCCTCCCCACTAAAGG 84
* *
consensus_9787#1 ACAGCAGCGAAGTGTAGTGCG-TTGTGGTGGTGAAAGTTTAG-A-GAGAT--------TG 175
consensus_9787#2 CCAACAAATAGCTACTTTGCC-TTGTGTCATCGCTGGAAAAGCG-GAAGA--------AG 168
consensus_9787#0 TTTCCTCGACCGGGCCCTGCT-TTGCGCTGACCGACGAGCAGCGTGAGATCGTGGACCTG 299
consensus_9787#3 ATATCGAAGATCAGAAAAACCGTTTTAACGGTGAGCAGTTTCTC-GAGAT---------G 134
* * ** ** *
consensus_9787#1 AACATCAATTTTGTTTACCAACAAAATA---CGATACCGAACGGTGGTCGTAGAGTTTGT 232
consensus_9787#2 AAGAAGAAGAAAAACCAACAACTCAGCT---CGAAGCTCCAAGAC--CCACAGTGCTTAG 223
consensus_9787#0 ACGAAGAAGTTTGTGCGCGAGGAGATCATCCCGGTGGCGGCCCACCACGACAAGACCGGC 359
consensus_9787#3 AAGAAACAGGCAGCGAAAGAGTCGGGCA-----GCAGTAGTCTGGTGGGTCAGGGCGGTG 189
* * * * *
consensus_9787#1 GTGTTGTCCATCTTTGTGGTAGTGAAAGTGTGCTAGCAAAGTGTAGATGGCAG----AAG 288
consensus_9787#2 GTGTGGTTTTGTTTTGTCGAAATATAGGGACGTTCTTATCG-GCAA-----AG----AAT 273
consensus_9787#0 GAGTACCCGTGGGCCATCATCAAGAAGGCGTGGGAGCTGGGCCTAACCAACAGCCACATC 419
consensus_9787#3 GTACCCCCCTCAGCAGTCTGCCGGACGGAGGAGGAGTCGATGGCGAACAACCA------- 242
* * *
consensus_9787#1 CCATTTAATGCCGGAACG-AGTGAACAATCATTAAGCTCCATCCCCCCGGTACAGGAACT 347
consensus_9787#2 TCCTGCGCTTACGAGACG-GATGGCCTGTTTCTAACACTCAGATT---AGGAAAATAACG 329
consensus_9787#0 CCGGCCGACATTGGTGGA-ACTGAAATGTCGATCGTGACGAGCTGCCTGGTGGCGGAACA 478
consensus_9787#3 CCAGCGAAGGACAGCACGGAAGGAGCTGGCGCCGACGATAATAAT-----AATAATAATG 297
* * * **
consensus_9787#1 TGAAGCTCTACAAGAATATCCA-A--A-GACATTA-CCGTGGAGGTTAATC--GCACA-- 398
consensus_9787#2 GTATTATCCTCAAAAATATCGG-ACTA-AACGTTATCCATCGTGTTCGTGT--GTGCATC 385
consensus_9787#0 GT-TTGCGTACGGCTGCACCGGCATCATGACCGCGATCGAGGCGAGCGGGCTGGGACAAA 537
consensus_9787#3 GTGCATCATCGGGCACCGTCAGTGCTGCAGCACAGATGGAAAAGATCGGTGCATGAAACA 357
* * * *
consensus_9787#1 -AGGCCTGCTTGGTTG---TTA-GGAGAAACCGTACAAA----AACACA---A-ACCCAT 445
consensus_9787#2 CAGCAGTAAATAAAAGGGTCCA-AAAATGACCGGACGACTTCCAGCTTGTGTG-ATTGAT 443
consensus_9787#0 CACCCGTCATCATTGCCGGCAA-CAAGGAGCAGCAGAAGAAGTACCTCGGCCG-GCTGCT 595
consensus_9787#3 CACATACACACACAGGCACGAGTCGTGTGACCTTTAACCTTCCGACTTGGGGGTGCTTCT 417
* * * *
consensus_9787#1 TTGAAA---GGCCGCATTAGCAG-CAG----CCGCTTCGAAGGAC-CAAACGCGCGCTCT 496
consensus_9787#2 GTAGGAACTGGGTACACGAAACT-TGGGT--TTGCAGCGAACAAG-GAACCACAGTTCAT 499
consensus_9787#0 GGAGGAACCGCTCGTGGCGGCCTACTGCG--TCACCGAGCCGGGCGCCGGCTCGGACGTG 653
consensus_9787#3 TAAAATCCCCCCTACATCCGCCTGTTGCTGATAAGCACAAACGAATCGAACGCGGTTTTT 477
* * *
consensus_9787#1 CT-CTCTTTTTGTTA--ACAACAAAACACACGACGGC-ATCTTAGTATCCTTGGAAGCGG 552
consensus_9787#2 CA-TCCCTTCCGCTATTGCGATCAAAGAGTCGGCCAA-AGTAGGCGATCAAAGTGCACGC 557
consensus_9787#0 AA-CGGGGTGAGAACGCGCGCCGAAAAGAAGGGCGACGAGTACATCCTGAACGGGCAGAA 712
consensus_9787#3 TGGTTATGAGTTGGACGATGATTTCGAAATTTAAAACGAACTCCTAACATAAGTGTTGTG 537
* *
consensus_9787#1 CAGAC-ACCTCTCTATCCCGTCACCATGGATATTTACTACATGAGCGACAGCATC----- 606
consensus_9787#2 CGTGTGACCAAAGGAGTCGAGGGACTTGGATTTCTACATCGGCGATGA-AGCGTT----- 611
consensus_9787#0 GATGTGGATCACGAACGGTGGCGTCGCCAACTGGTACTTTGTGCTGGCCCGCACCAATCC 772
consensus_9787#3 TACGTGTGTGTGTTGTCCTAATGCTCGCGGCATTAACACTGTTTCCCACGGTTCG----- 592
** *
consensus_9787#1 CAGTACTCGTCGTTCCGCGGTCCA---GTCTACCGGG-ACTACGAGAAGTTCCCGTACGG 662
consensus_9787#2 CGATGCGACTGGATACTCGGTGAA---GTACCCCGTTCGCCATGGGCTGGTCGAA----- 663
consensus_9787#0 CGACCCGAAGTGTCCCGCCTCGAAAGCGTTCACCGGGTTCATCGTGGAGCGCG-ATACGC 831
consensus_9787#3 CACTACACTTTCTTTCATTTTGAT---TTTTACATCCTATCCCAACACAATATCATTTAG 649
* * * * *
consensus_9787#1 T----------------------------------------------------------- 663
consensus_9787#2 ------------------------------------------------------------
consensus_9787#0 CCGGCCTGACGCCCGGGCCGCAAGGAGCAAAACATGGGCCAGCGGGCGTCCGACACGCGC 891
consensus_9787#3 CTGGTAAG---------------------------------------------------- 657
consensus_9787#1 ------------
consensus_9787#2 ------------
consensus_9787#0 GGCATCACGTTC 903
consensus_9787#3 ------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||