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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9810#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1171 fasta sequence
[CCGCCCACGCGTCCGGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGTATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGTTCCGGCTGAAGGGGCGCGACGTGCACAAGGCCGGCGTGNCGACGCACTACGTGGAGAGCAAAAATCTGCCCGCGCTGGAGCAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCNGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACCAGTGCTNCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACNGTAGCGAGTGGGCACAGANCACGCTGAAGCTGCTCCACAAGATGTCCNNCACCTCAATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTNGAAGACGTGTCTCAAGATGGAGTACCGGCNTGCCCGTGCACCATGCGATCGAC]
[+] EMBL BM655363 [CCGCCCACGCGTCCGGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGTATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAATTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACGGAGGAAGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAGTACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGT ]
[+] EMBL BX621316 [ CACTGTGCCGCTTAGCTACAAGCATCGTGGGATACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCGACTTCAACCGGAACGTCAAGCCTTCGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACTGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGNCTGACCGGGT ]
[+] EMBL BM588635 [ ccgGTGCCGCTTAGCTACAAGTATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGTCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGTTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAGTACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCG ]
[+] EMBL BM587964 [ ccgGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCCCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGTTCCGGCTGA ]
[+] EMBL BM650984 [ ccgCAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGTCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGTTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTTATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAGTACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGA ]
[+] EMBL BX603660 [ TGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACTGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGTTCCGGC ]
[+] EMBL BX624340 [ AGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGNNCCGGCTGAAGGGGCGCGACGTGCACAAGGCCGGCGTGNCGACGCACTACGTGGAGAGCAAAAATCTGCCCGCGCTGGAGCAGCAGCTGCTGGCCACGACGAGCGGTGCCNAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGANGCGGGACGCNGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACCAGTGCTNCAGTGCGCCGACGGTGGAGGCCATTTTC ]
[+] EMBL BX619267 [ ATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGTTCCGGCTGAAGGGGCGCGACGTGCACAAGGCCGGCGTGGCGACGCACTACGTGGAGAGCAAAAATCTGCCCGCGCTGGAGCAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCGGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACCAGTGCTTCAGTGCGCCGACNGTGGAGGCCATNTTCCAGCAGCTGGAGCGGGACNGTAGCGAGTGGGCACAGANCACGCTGAAGCTGCTCCACAAGATGTCCNNCACCTCAATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTNGAAGACGTGTCTCAAGATGGAGTACCGGCNTGCCCGTGCACCATGCGATCGAC]
[+] EMBL CNS090LR [ AGAGCAAAAATATGGGCGCGCTGGAGCAGCAGCTGCTGGGCACGACGAGCGGTGGCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAA ]
consensusID : consensus_9810#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1146 fasta sequence
[AGATCCCCGAGGTTGAAATTAATCAAGTAGCACTGTGCCGCTTAGCTACAAGCATCTGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCAGGTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGGGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTTTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTATTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGCGATCAGAAACCGCGCTGGAATCCAGCCACGCTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCCGGTCAAAAGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACA-ATAAAAGGAAACGATTTTTTGG]
[+] EMBL AL930123 [AGATCCCCGAGGTTGAAATTAATCAAGTAGCACTGTGCCGCTTAGCTACAAGCATCTGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCAGGTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGC ]
[-] EMBL CNS0965H [ ACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGGGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTTTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTATTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGCGATCAGAAACCGCGCTGGAATCCAGCCACGCTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCCGGTCAAAAGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACATATAAGAG ]
[-] EMBL CNS09BCV [ GAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTTTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGGG TGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTTTCTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTAGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGCGATCAGAAACCGCGCTGGAATCCAGCCACGCTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGGGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCCGGTCAAAAGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTTTTTCTTTTTTCTGCAACCCCACACAGAAAGCCAACA ATAAAGTGAAACGATTTTTTGG]
[-] EMBL CNS099RY [ GAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCCGGTCAAAAGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCC ACA ATAAAt ]
consensusID : consensus_9810#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1031 fasta sequence
[GCGCAGGCAACATCGACATCGTTGAAAAACACTCGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTAGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGACGTGCACAAGGCCGGCGTGGCGACGCACTACGTGGAGAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCGGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACGAGTGCTTCAGTGCGCCGACGGTGGAGGCTATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTTGAAGACGTGTCTCAAGATGGAGTACCGGCTTGCCGTGCACCATGCTATCGACAGCGACTTCAAGGAAGGTGTGCGCGCCCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCACACTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTG-CGGTGTGCTGCTCTCCGGTCAAAGGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGGCACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACAATAAAGTGAAACGATTTTCTACCACCT]
[+] EMBL CNS090VV [GCGCAGGCAACATCGACATCGTTGAAAAACACTCGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTAGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGACGTGCACAAGGCCGGCGTGGCGACGCACTACGTGGAGAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCGGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACGAGTGCTTCAGTGCGCCGACGGTGGAGGCTATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTTGAAGACGTGTCTCAAGATGGAGTACCGGCTTGCCGTGCACCATGCTATCGACAGCGACTTCAAGGAAGGTGTGCGCGCCCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCACACTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGG CCAAGGCATCCCTGTAAGCGGAG TGCCGGTGTGCTGCTCTCCGGTCAAAGGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTGAGACTA ]
[+] EMBL BM599173 [ GACGGTAGCGAGTGGGCACAGAACACTCTGAAGCTGCTCCACAAAATGTCCCCCACCTCTATGGTGGTGACGCATAAGCAGCTCGAGCTGGGCGGCAAGATGGATTTGAAGACGTGTCTCAAGATGGAGTACCGGCTTGCCGTGCACCATGCGATCTACAGCGACTTCAAGGAAGGTGTGCGCGCCCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCACGCTGGCATAGGTGGATCCAGCGCGCATCGAGCAGTTCTTCCGCCCGCTGCCGGACGGCTATGAGCTCCAGTTCGAGGAGGAGGGGCCCAATGCATCCCTGTAATCGGAGCTG CGGTGTGCTGCTCTCCGGTCAAAAGATTGGA ]
[-] EMBL CNS090VW [ ACAAAATGTCCCCCACCTCGATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTTGAAGACGTGTCTCAAGATGGAGTACCGGCTTGCCGTGCACCATGCTATCGACAGCGACTTCAAGGAAGGTGTGCGCGCCCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCAAACTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTG CGGTGTGCTGCTCTCCGGTCAAAGGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGGCACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACAATAAAGTGAA ]
[+] EMBL BM591231 [ ccgCGGCCACGCTGGCAGAGGTGGATCCGGCGCGCATCGAACAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGTGCTG CGGTGTGCTGCTCTCCGGTCAAAGGATTGGAACACGTCGAGAAATGATACCACAACTAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTGGTGTTTCAAACATGAATACGGGCACCGTTCTTTCCTTTTTTTGCAACCCCACACAGAAAGCCAACAATAAAGTGAAACGATTTTCTACCACCT]
consensusID : consensus_9810#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 857 fasta sequence
[GGCGCAGGCAACATCGACATCGTTGAAAAACACTGCGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCT-CGACGGCAGG-TGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTCTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTAGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGAGATAA]
[+] EMBL CNS0965G [GGCGCAGGCAACATCGACATCGTTGAAAAACACTGCGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCT CGACGGCAGG TGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTCTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTAGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGAGATAA]
[+] EMBL CNS09BCU [ CATCGACATCGTTGAAAAACACT CGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAGCACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCT CGACGGCAGG TGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTCTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTTCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTTGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTAGTTACGCAGAAGCAGCTCGAGCTGG ]
[+] EMBL BX626094 [ GAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTGGGATACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCGACTTCAACCGGAACGTCAAGCCTTCGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCT CGACGGCCGG TGATAGCAACAGCCTGGTACTGACTGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTNCTGTGCCGGCGGGGACGNGCGCGCCATCACCGAGACNAGCAATGTGGA ]
[+] EMBL CNS099RX [ GCTTAGCTACAAGCATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCCGACGGCAGGTTGAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9810#0 -----------------------CCGCCCACGCGTCCG-GTCACACTGGTAGCGGTCGGT 36
consensus_9810#3 GGCGCAGGCAACATCGACATCGTTGAAAAACACTGCGACGTCACACTGGTAGCGGTCGGT 60
consensus_9810#1 ------------------------------------------------AGATCCCCGAGG 12
consensus_9810#2 -GCGCAGGCAACATCGACATCGTTGAAAAACAC-TCGACGTCACACTGGTAGCGGTCGGT 58
* * *
consensus_9810#0 CGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGTATC-GTGGGACACACAA 95
consensus_9810#3 CGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATC-GTGGGACACACAA 119
consensus_9810#1 TTGAAATTAA-TCAAGTA-GCACTGTGCCGCTTAGCTACAAGCATCTGTGGGACACACAA 70
consensus_9810#2 CGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATC-GTAGGACACACAA 117
******** ******* *********************** *** ** **********
consensus_9810#0 CACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAA 155
consensus_9810#3 CACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAA 179
consensus_9810#1 CACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAA 130
consensus_9810#2 CACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAA 177
************************************************************
consensus_9810#0 CGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAG 215
consensus_9810#3 CGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAG 239
consensus_9810#1 CGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAG 190
consensus_9810#2 CGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAG 237
************************************************************
consensus_9810#0 CCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGA 275
consensus_9810#3 CCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCAGGTGA 299
consensus_9810#1 CCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCAGGTGA 250
consensus_9810#2 CCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGACGTGCACAA-GGCCGGCG- 295
***************************************** ** * * * *** ** *
consensus_9810#0 TAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAA-GGGCGTGATCACACTGAATC 334
consensus_9810#3 TAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAA-GGGCGTGATCACACTGAATC 358
consensus_9810#1 TAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAA-GGGCGTGATCACACTGAATC 309
consensus_9810#2 TGGCGAC-GCACTACGTGGAGAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAA 354
* ** ** ** ** * * * *** * * * *** * ** *
consensus_9810#0 GCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACG-CCATG 393
consensus_9810#3 GCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACG-CCATG 417
consensus_9810#1 GCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACG-CCATG 368
consensus_9810#2 GCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCGGGC-GCCGAGTTTGTGCTGGCCAAG 413
** * * * * * * ** * *** ** * * * * * * * *** *
consensus_9810#0 AAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTC 453
consensus_9810#3 AAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTC 477
consensus_9810#1 AAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTC 428
consensus_9810#2 CAGCTGCAGCAAATCAACGAGTGCTT---CAGTGCG----CCGACGGTGG-AGGCTATTT 465
*** * * *** ** * ** ** * ** * * *** *** * * * **
consensus_9810#0 TGTGCCGGCGGGGACGTGCGCGCCATCACCGAG-AC-GAGCAATGTGGAGCTGGCGCGAA 511
consensus_9810#3 TGTGCCGGCGGGGACGTGCGCGCCATCACCGAG-AC-GAGCAATGTGGAGCTGGCGCGAA 535
consensus_9810#1 TGTGCCGGCGGGGACGTGCGCGCCATCACCGAG-AC-GAGCAATGTGGGGCTGGCGCGAA 486
consensus_9810#2 TCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACA 525
* * ** ** ** * * * * * ** ** ** ** **** * *
consensus_9810#0 AGTTTTTCAGCACCG-AATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTAC 570
consensus_9810#3 AGTTTTTCAGCACCG-AATACCGGCTGAACGCGCTCATCGGCAA---------------- 578
consensus_9810#1 AGTTTTTCAGCACCG-AATACCGGCTGAACGCGCTCATCGGCAA---------------- 529
consensus_9810#2 AAATGTCCCCCACCTCGATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCG-----GCAA 580
* * * * **** ** ** * ** * *
consensus_9810#0 ATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAG 630
consensus_9810#3 GATGGATTTGAAGACG---------------------------TGTCT--------CAAG 603
consensus_9810#1 GATGGATTTGAAGACG---------------------------TGTTT--------CAAG 554
consensus_9810#2 GATGGATTTGAAGACG---------------------------TGTCTCAAGATG--GAG 611
** ** **** *** **
consensus_9810#0 TACCGCATCGCGACGGAGCGCACCAT-GTTCGCGATGCCCGAGACGGCCATCGGGCTGTT 689
consensus_9810#3 TACCGCATTGCGACGGAGCGCACCAT-GTTCGCGATGCCGGAGACGGCCATCGGGCTGTT 662
consensus_9810#1 TACCGCATTGCGACGGAGCGCACCAT-GTTCGCGATGCCGGAGACGGCCATCGGGCTGTT 613
consensus_9810#2 TACCGGCTTGCCGTGCACCATGCTATCGACAGCGACTTCAAGGAAGGTGTGCGCGC---- 667
***** * ** * * * * ** * **** * ** ** ** **
consensus_9810#0 CCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCT 749
consensus_9810#3 CCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGC 722
consensus_9810#1 CCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGC 673
consensus_9810#2 CCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCACACTGG---CAGAGGT 724
** * * * *** * * * * * * *
consensus_9810#0 CGGCCTGACCGGGTTCCGGCTGAAGGGGCGCGA-CGTGCACAAGGCCGGCGTGNCGACGC 808
consensus_9810#3 CATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGC-TGAAGCTGC 781
consensus_9810#1 CATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGC-TGAAGCTGC 732
consensus_9810#2 GGATCCGGCGCGCATCGAGC---AGTTCTTCGGCCCGCTGCCGGAC-GGCGATGAGCTCC 780
* ** * ** * * ** * *
consensus_9810#0 ACTACGTGGAGAGCAAAAATCTGCCCGCGCTGGAGCAGCAGCTGCTGGCCACGACGAGCG 868
consensus_9810#3 TCCACAAAATGTCCCCCACCTCGATGGTAGTGACGCAGAAGCAGCTCGAGCTGGGCGGCA 841
consensus_9810#1 TCCACAAAATGTCCCCCACCTCGATGGTATTGACGCAGAAGCAGCTCGAGCTGGGCGGCA 792
consensus_9810#2 AGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCC 840
* * * ** * *** ** *
consensus_9810#0 GTGCCGAGG-----TGGAAAGCGTGCTGGA---CCGGTTCTCGGAGAAGCGGGACGCNGG 920
consensus_9810#3 AGATCGATC-----GAGATAA--------------------------------------- 857
consensus_9810#1 AGATCGATCGCGATCAGAAACCGCGCTGGAATCCAGCCACGCTGGCAGAGGTGGATCCGG 852
consensus_9810#2 GGTCAAAGGA---TTGGAACACGTCGAGAA---ATGATACCACAACAAAAGTGCATTTAC 894
* **
consensus_9810#0 CGCCGAGTTTGT-GCTGGCCAAGCAGCTGCAGCAAATCAACCAGTGCTNCAGTGCGCCGA 979
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 CGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGG 912
consensus_9810#2 TAGCGAGTAAGACTAATGCCAA----CGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACA 950
consensus_9810#0 CGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACNGTAGCGAGTGGGCACAGANCACGC 1039
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 AGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGT-GCTGCTCTCCGGTCAAAAGAT 971
consensus_9810#2 TGAATACGGGCACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACAATAAAG 1010
consensus_9810#0 TGAAGCTGCTCCACAAGATGTCCNNCACCTCAATGGTGGTGACGCAGAAGCAGCTCGAGC 1099
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 TGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAAT 1031
consensus_9810#2 TGAAACGATTTTCTACCACCT--------------------------------------- 1031
consensus_9810#0 -TGGGCGGCAAGATGGATTNGAAGAC-GTGTCTCAAGATGGAGTACCGGCNTGCCCGTGC 1157
consensus_9810#3 ------------------------------------------------------------
consensus_9810#1 GCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTCTTT 1091
consensus_9810#2 ------------------------------------------------------------
consensus_9810#0 ACCATGCGATCGAC----------------------------------------- 1171
consensus_9810#3 -------------------------------------------------------
consensus_9810#1 CCTTTTTCTGCAACCCCACACAGAAAGCCAACAATAAAAGGAAACGATTTTTTGG 1146
consensus_9810#2 -------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||