These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9810#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1171 fasta sequence [CCGCCCACGCGTCCGGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGTATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGTTCCGGCTGAAGGGGCGCGACGTGCACAAGGCCGGCGTGNCGACGCACTACGTGGAGAGCAAAAATCTGCCCGCGCTGGAGCAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCNGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACCAGTGCTNCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACNGTAGCGAGTGGGCACAGANCACGCTGAAGCTGCTCCACAAGATGTCCNNCACCTCAATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTNGAAGACGTGTCTCAAGATGGAGTACCGGCNTGCCCGTGCACCATGCGATCGAC] [+] EMBL BM655363 [CCGCCCACGCGTCCGGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGTATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAATTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACGGAGGAAGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAGTACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGT ] [+] EMBL BX621316 [ CACTGTGCCGCTTAGCTACAAGCATCGTGGGATACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCGACTTCAACCGGAACGTCAAGCCTTCGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACTGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGNCTGACCGGGT ] [+] EMBL BM588635 [ ccgGTGCCGCTTAGCTACAAGTATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGTCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGTTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAGTACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCG ] [+] EMBL BM587964 [ ccgGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCCCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGTTCCGGCTGA ] [+] EMBL BM650984 [ ccgCAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGTCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGTTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTTATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAGTACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGA ] [+] EMBL BX603660 [ TGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGATAGCAACAGCCTGGTACTGACTGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGTTCCGGC ] [+] EMBL BX624340 [ AGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGNNCCGGCTGAAGGGGCGCGACGTGCACAAGGCCGGCGTGNCGACGCACTACGTGGAGAGCAAAAATCTGCCCGCGCTGGAGCAGCAGCTGCTGGCCACGACGAGCGGTGCCNAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGANGCGGGACGCNGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACCAGTGCTNCAGTGCGCCGACGGTGGAGGCCATTTTC ] [+] EMBL BX619267 [ ATCGGCCCACGTACATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAGTACCGCATCGCGACGGAGCGCACCATGTTCGCGATGCCCGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCTCGGCCTGACCGGGTTCCGGCTGAAGGGGCGCGACGTGCACAAGGCCGGCGTGGCGACGCACTACGTGGAGAGCAAAAATCTGCCCGCGCTGGAGCAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCGGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACCAGTGCTTCAGTGCGCCGACNGTGGAGGCCATNTTCCAGCAGCTGGAGCGGGACNGTAGCGAGTGGGCACAGANCACGCTGAAGCTGCTCCACAAGATGTCCNNCACCTCAATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTNGAAGACGTGTCTCAAGATGGAGTACCGGCNTGCCCGTGCACCATGCGATCGAC] [+] EMBL CNS090LR [ AGAGCAAAAATATGGGCGCGCTGGAGCAGCAGCTGCTGGGCACGACGAGCGGTGGCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAA ] consensusID : consensus_9810#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1146 fasta sequence [AGATCCCCGAGGTTGAAATTAATCAAGTAGCACTGTGCCGCTTAGCTACAAGCATCTGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCAGGTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGGGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTTTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTATTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGCGATCAGAAACCGCGCTGGAATCCAGCCACGCTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCCGGTCAAAAGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACA-ATAAAAGGAAACGATTTTTTGG] [+] EMBL AL930123 [AGATCCCCGAGGTTGAAATTAATCAAGTAGCACTGTGCCGCTTAGCTACAAGCATCTGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCAGGTGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGC ] [-] EMBL CNS0965H [ ACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGGGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTTTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTATTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGCGATCAGAAACCGCGCTGGAATCCAGCCACGCTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCCGGTCAAAAGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACATATAAGAG ] [-] EMBL CNS09BCV [ GAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTTTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGGG TGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTTTCTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTAGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGCGATCAGAAACCGCGCTGGAATCCAGCCACGCTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGGGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCCGGTCAAAAGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTTTTTCTTTTTTCTGCAACCCCACACAGAAAGCCAACA ATAAAGTGAAACGATTTTTTGG] [-] EMBL CNS099RY [ GAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCCGGTCAAAAGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCC ACA ATAAAt ] consensusID : consensus_9810#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1031 fasta sequence [GCGCAGGCAACATCGACATCGTTGAAAAACACTCGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTAGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGACGTGCACAAGGCCGGCGTGGCGACGCACTACGTGGAGAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCGGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACGAGTGCTTCAGTGCGCCGACGGTGGAGGCTATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTTGAAGACGTGTCTCAAGATGGAGTACCGGCTTGCCGTGCACCATGCTATCGACAGCGACTTCAAGGAAGGTGTGCGCGCCCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCACACTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTG-CGGTGTGCTGCTCTCCGGTCAAAGGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGGCACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACAATAAAGTGAAACGATTTTCTACCACCT] [+] EMBL CNS090VV [GCGCAGGCAACATCGACATCGTTGAAAAACACTCGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTAGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGACGTGCACAAGGCCGGCGTGGCGACGCACTACGTGGAGAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAAGCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCGGGCGCCGAGTTTGTGCTGGCCAAGCAGCTGCAGCAAATCAACGAGTGCTTCAGTGCGCCGACGGTGGAGGCTATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTTGAAGACGTGTCTCAAGATGGAGTACCGGCTTGCCGTGCACCATGCTATCGACAGCGACTTCAAGGAAGGTGTGCGCGCCCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCACACTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGG CCAAGGCATCCCTGTAAGCGGAG TGCCGGTGTGCTGCTCTCCGGTCAAAGGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTGAGACTA ] [+] EMBL BM599173 [ GACGGTAGCGAGTGGGCACAGAACACTCTGAAGCTGCTCCACAAAATGTCCCCCACCTCTATGGTGGTGACGCATAAGCAGCTCGAGCTGGGCGGCAAGATGGATTTGAAGACGTGTCTCAAGATGGAGTACCGGCTTGCCGTGCACCATGCGATCTACAGCGACTTCAAGGAAGGTGTGCGCGCCCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCACGCTGGCATAGGTGGATCCAGCGCGCATCGAGCAGTTCTTCCGCCCGCTGCCGGACGGCTATGAGCTCCAGTTCGAGGAGGAGGGGCCCAATGCATCCCTGTAATCGGAGCTG CGGTGTGCTGCTCTCCGGTCAAAAGATTGGA ] [-] EMBL CNS090VW [ ACAAAATGTCCCCCACCTCGATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATGGATTTGAAGACGTGTCTCAAGATGGAGTACCGGCTTGCCGTGCACCATGCTATCGACAGCGACTTCAAGGAAGGTGTGCGCGCCCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCAAACTGGCAGAGGTGGATCCGGCGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTG CGGTGTGCTGCTCTCCGGTCAAAGGATTGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGGCACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACAATAAAGTGAA ] [+] EMBL BM591231 [ ccgCGGCCACGCTGGCAGAGGTGGATCCGGCGCGCATCGAACAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGTGCTG CGGTGTGCTGCTCTCCGGTCAAAGGATTGGAACACGTCGAGAAATGATACCACAACTAAAGTGCATTTACTAGCGAGTAAGACTAATGCCAACGGCAAAGCTGTTGCGCGCCTGGTGTTTCAAACATGAATACGGGCACCGTTCTTTCCTTTTTTTGCAACCCCACACAGAAAGCCAACAATAAAGTGAAACGATTTTCTACCACCT] consensusID : consensus_9810#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 857 fasta sequence [GGCGCAGGCAACATCGACATCGTTGAAAAACACTGCGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCT-CGACGGCAGG-TGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTCTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTAGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGAGATAA] [+] EMBL CNS0965G [GGCGCAGGCAACATCGACATCGTTGAAAAACACTGCGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCT CGACGGCAGG TGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTCTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTAGTGACGCAGAAGCAGCTCGAGCTGGGCGGCAAGATCGATCGAGATAA] [+] EMBL CNS09BCU [ CATCGACATCGTTGAAAAACACT CGACGTCACACTGGTAGCGGTCGGTCGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAGCACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCT CGACGGCAGG TGATAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTCTGTGCCGGCGGGGACGTGCGCGCCATCACCGAGACGAGCAATGTGGAGCTGGCGCGAAAGTTTTTCAGCACCGAATACCGGCTGAACGCGCTCATCGGCAAGATGGATTTGAAGACGTGTCTCAAGTACCGCATTGCGACGGAGCGCACCATGTTCGCGATGCCGGAGACGGCCATCGGGCTGTTCCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTTCTTCAGTGCGCCGACGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTTGGCACAGAACACGCTGAAGCTGCTCCACAAAATGTCCCCCACCTCGATGGTAGTTACGCAGAAGCAGCTCGAGCTGG ] [+] EMBL BX626094 [ GAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATCGTGGGATACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCGACTTCAACCGGAACGTCAAGCCTTCGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCT CGACGGCCGG TGATAGCAACAGCCTGGTACTGACTGAGGAGGTCGGCAGCAAGGGCGTGATCACACTGAATCGCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACGCCATGAAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTNCTGTGCCGGCGGGGACGNGCGCGCCATCACCGAGACNAGCAATGTGGA ] [+] EMBL CNS099RX [ GCTTAGCTACAAGCATCGTGGGACACACAACACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAACGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAGCCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCCGACGGCAGGTTGAT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9810#0 -----------------------CCGCCCACGCGTCCG-GTCACACTGGTAGCGGTCGGT 36 consensus_9810#3 GGCGCAGGCAACATCGACATCGTTGAAAAACACTGCGACGTCACACTGGTAGCGGTCGGT 60 consensus_9810#1 ------------------------------------------------AGATCCCCGAGG 12 consensus_9810#2 -GCGCAGGCAACATCGACATCGTTGAAAAACAC-TCGACGTCACACTGGTAGCGGTCGGT 58 * * * consensus_9810#0 CGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGTATC-GTGGGACACACAA 95 consensus_9810#3 CGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATC-GTGGGACACACAA 119 consensus_9810#1 TTGAAATTAA-TCAAGTA-GCACTGTGCCGCTTAGCTACAAGCATCTGTGGGACACACAA 70 consensus_9810#2 CGGAAATTAAATCAAGTAAGCACTGTGCCGCTTAGCTACAAGCATC-GTAGGACACACAA 117 ******** ******* *********************** *** ** ********** consensus_9810#0 CACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAA 155 consensus_9810#3 CACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAA 179 consensus_9810#1 CACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAA 130 consensus_9810#2 CACCAGTTGCATAATCACAGAGAGCACAACACCCCGCACAGCCAGCAACTTCAACCGGAA 177 ************************************************************ consensus_9810#0 CGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAG 215 consensus_9810#3 CGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAG 239 consensus_9810#1 CGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAG 190 consensus_9810#2 CGTCAAGCCTACGAAAACGAATACGATGCTACGAGCGATTGCGGTGCGCGCCGGACTAAG 237 ************************************************************ consensus_9810#0 CCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCCGGTGA 275 consensus_9810#3 CCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCAGGTGA 299 consensus_9810#1 CCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGATGTCCTCGACGGCAGGTGA 250 consensus_9810#2 CCGATCGGGCCAACTGGTCGCCCCGAGCGTTTGCCGCGCGACGTGCACAA-GGCCGGCG- 295 ***************************************** ** * * * *** ** * consensus_9810#0 TAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAA-GGGCGTGATCACACTGAATC 334 consensus_9810#3 TAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAA-GGGCGTGATCACACTGAATC 358 consensus_9810#1 TAGCAACAGCCTGGTACTGACGGAGGAGGTCGGCAGCAA-GGGCGTGATCACACTGAATC 309 consensus_9810#2 TGGCGAC-GCACTACGTGGAGAGCAGCTGCTGGCCACGACGAGCGGTGCCGAGGTGGAAA 354 * ** ** ** ** * * * *** * * * *** * ** * consensus_9810#0 GCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACG-CCATG 393 consensus_9810#3 GCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACG-CCATG 417 consensus_9810#1 GCCCGAAAGCGCTGAACGCCATCAATCTGGAAATGGTCCGGCTCATCTACGACG-CCATG 368 consensus_9810#2 GCGTGCTGGACCGGTTCTCGGAGAAGCGGGACGCGGGC-GCCGAGTTTGTGCTGGCCAAG 413 ** * * * * * * ** * *** ** * * * * * * * *** * consensus_9810#0 AAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTC 453 consensus_9810#3 AAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTC 477 consensus_9810#1 AAGCAGTGGGAAAGCACCAAGAGCGTGGTCATCGTGAAATCCGTCGGCGATAAGGCGTTC 428 consensus_9810#2 CAGCTGCAGCAAATCAACGAGTGCTT---CAGTGCG----CCGACGGTGG-AGGCTATTT 465 *** * * *** ** * ** ** * ** * * *** *** * * * ** consensus_9810#0 TGTGCCGGCGGGGACGTGCGCGCCATCACCGAG-AC-GAGCAATGTGGAGCTGGCGCGAA 511 consensus_9810#3 TGTGCCGGCGGGGACGTGCGCGCCATCACCGAG-AC-GAGCAATGTGGAGCTGGCGCGAA 535 consensus_9810#1 TGTGCCGGCGGGGACGTGCGCGCCATCACCGAG-AC-GAGCAATGTGGGGCTGGCGCGAA 486 consensus_9810#2 TCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGCTGAAGCTGCTCCACA 525 * * ** ** ** * * * * * ** ** ** ** **** * * consensus_9810#0 AGTTTTTCAGCACCG-AATACCGGCTGAACGCGCTCATCGGCAGCTATCGGCCCACGTAC 570 consensus_9810#3 AGTTTTTCAGCACCG-AATACCGGCTGAACGCGCTCATCGGCAA---------------- 578 consensus_9810#1 AGTTTTTCAGCACCG-AATACCGGCTGAACGCGCTCATCGGCAA---------------- 529 consensus_9810#2 AAATGTCCCCCACCTCGATGGTGGTGACGCAGAAGCAGCTCGAGCTGGGCG-----GCAA 580 * * * * **** ** ** * ** * * consensus_9810#0 ATTGCGTTCATCGACGGTATCACGATGGGCGGCGGCGTCGGGCTGTCCGTGCACGGCAAG 630 consensus_9810#3 GATGGATTTGAAGACG---------------------------TGTCT--------CAAG 603 consensus_9810#1 GATGGATTTGAAGACG---------------------------TGTTT--------CAAG 554 consensus_9810#2 GATGGATTTGAAGACG---------------------------TGTCTCAAGATG--GAG 611 ** ** **** *** ** consensus_9810#0 TACCGCATCGCGACGGAGCGCACCAT-GTTCGCGATGCCCGAGACGGCCATCGGGCTGTT 689 consensus_9810#3 TACCGCATTGCGACGGAGCGCACCAT-GTTCGCGATGCCGGAGACGGCCATCGGGCTGTT 662 consensus_9810#1 TACCGCATTGCGACGGAGCGCACCAT-GTTCGCGATGCCGGAGACGGCCATCGGGCTGTT 613 consensus_9810#2 TACCGGCTTGCCGTGCACCATGCTATCGACAGCGACTTCAAGGAAGGTGTGCGCGC---- 667 ***** * ** * * * * ** * **** * ** ** ** ** consensus_9810#0 CCCGGACGTTGGCGGCGGCTATTTCCTGCCCCGGCTCGAGGGCAAGCTCGGCCTCTATCT 749 consensus_9810#3 CCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGC 722 consensus_9810#1 CCCGGACGTTGGCGGCGGCTATTTCCTACCCCAGTGCTTCAGTGCGCCGACGGTGGAGGC 673 consensus_9810#2 CCTGCTGATCGATCGCGATCAGAAACCGCGCTGGAATCCGGCCACACTGG---CAGAGGT 724 ** * * * *** * * * * * * * consensus_9810#0 CGGCCTGACCGGGTTCCGGCTGAAGGGGCGCGA-CGTGCACAAGGCCGGCGTGNCGACGC 808 consensus_9810#3 CATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGC-TGAAGCTGC 781 consensus_9810#1 CATTTTCCAGCAGCTGGAGCGGGACGGTAGCGAGTGGGCACAGAACACGC-TGAAGCTGC 732 consensus_9810#2 GGATCCGGCGCGCATCGAGC---AGTTCTTCGGCCCGCTGCCGGAC-GGCGATGAGCTCC 780 * ** * ** * * ** * * consensus_9810#0 ACTACGTGGAGAGCAAAAATCTGCCCGCGCTGGAGCAGCAGCTGCTGGCCACGACGAGCG 868 consensus_9810#3 TCCACAAAATGTCCCCCACCTCGATGGTAGTGACGCAGAAGCAGCTCGAGCTGGGCGGCA 841 consensus_9810#1 TCCACAAAATGTCCCCCACCTCGATGGTATTGACGCAGAAGCAGCTCGAGCTGGGCGGCA 792 consensus_9810#2 AGTTCGAGGAGGAGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGTGCTGCTCTCC 840 * * * ** * *** ** * consensus_9810#0 GTGCCGAGG-----TGGAAAGCGTGCTGGA---CCGGTTCTCGGAGAAGCGGGACGCNGG 920 consensus_9810#3 AGATCGATC-----GAGATAA--------------------------------------- 857 consensus_9810#1 AGATCGATCGCGATCAGAAACCGCGCTGGAATCCAGCCACGCTGGCAGAGGTGGATCCGG 852 consensus_9810#2 GGTCAAAGGA---TTGGAACACGTCGAGAA---ATGATACCACAACAAAAGTGCATTTAC 894 * ** consensus_9810#0 CGCCGAGTTTGT-GCTGGCCAAGCAGCTGCAGCAAATCAACCAGTGCTNCAGTGCGCCGA 979 consensus_9810#3 ------------------------------------------------------------ consensus_9810#1 CGCGCATCGAGCAGTTCTTCGGCCCGCTGCCGGACGGCGATGAGCTCCAGTTCGAGGAGG 912 consensus_9810#2 TAGCGAGTAAGACTAATGCCAA----CGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACA 950 consensus_9810#0 CGGTGGAGGCCATTTTCCAGCAGCTGGAGCGGGACNGTAGCGAGTGGGCACAGANCACGC 1039 consensus_9810#3 ------------------------------------------------------------ consensus_9810#1 AGGGGCCCAAGGCATCCCTGTAAGCGGAGCTGCGGTGT-GCTGCTCTCCGGTCAAAAGAT 971 consensus_9810#2 TGAATACGGGCACCGTTCTTTCCTTTTTCTGCAACCCCACACAGAAAGCCAACAATAAAG 1010 consensus_9810#0 TGAAGCTGCTCCACAAGATGTCCNNCACCTCAATGGTGGTGACGCAGAAGCAGCTCGAGC 1099 consensus_9810#3 ------------------------------------------------------------ consensus_9810#1 TGGAACACGTCGAGAAATGATACCACAACAAAAGTGCATTTACTAGCGAGTAAGACTAAT 1031 consensus_9810#2 TGAAACGATTTTCTACCACCT--------------------------------------- 1031 consensus_9810#0 -TGGGCGGCAAGATGGATTNGAAGAC-GTGTCTCAAGATGGAGTACCGGCNTGCCCGTGC 1157 consensus_9810#3 ------------------------------------------------------------ consensus_9810#1 GCCAACGGCAAAGCTGTTGCGCGCCTTGTGTTTCAAACATGAATACGGACACCGTTCTTT 1091 consensus_9810#2 ------------------------------------------------------------ consensus_9810#0 ACCATGCGATCGAC----------------------------------------- 1171 consensus_9810#3 ------------------------------------------------------- consensus_9810#1 CCTTTTTCTGCAACCCCACACAGAAAGCCAACAATAAAAGGAAACGATTTTTTGG 1146 consensus_9810#2 ------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||