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Anopheles gambiae
cluster # 9847 cluster # 9847       Sequences # 22       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9847#0 length = 660 sequences # 21  
consensus_9847#1 length = 227 sequences # 1  

consensusID : consensus_9847#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 660
fasta sequence
                              [CCGACTTCTTCGATTGGCAAGCAGATTAAGCGTGTGTCTCCGTACCGCAGCAAATGTGAGCAATGTGTGTCGGCCTATAAATAGGTGTTCCGTCAATTCGATCTTTCATCATCGCCCGCTAGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATCCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGGCCATCAGT---------ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCGAAG-TGAGGAGAGGTTTTTGGCG--AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGTAAGTAAAATCG]

[+] EMBL BM608754             [CCGACTTCTTCGATTGGCAAGCAGATTAAGCGTGTGTCTCCGTACCGCAGCAAATGTGAGCAATGTGTGTCGGCCTATAAATAGGTGTTCCGTCAATTCGATCTTTCATCATCGCCATCTAGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATTCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCT                                                               ]
[+] EMBL BM617667             [                                                                                                               cCGCCCACGCGTC CGCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATCCGACCTCCCCCCAAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGGCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCAAAG TGAGGAGAGGTTTTTGGTG   AAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGATGATGTTTTGGCGTCGGCGA                                            ]
[+] EMBL BM616965             [                                                                                                                   CCG TAGTCTTTCTGCCTGTTCGGTCAACTCGTCCAAAGCCAATCCAACCT CCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCAATCCTTTTGGGCGTGTGCGTACTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGTGCTCCGGCACACGCTGGCGGCCATCAGTACCACCAGCACGGTGGCCATCATGGCGGATATCGTGCGTTCGAGCAGGCCGAATCCGAAGCTGATGCGGAATGAGTGCGGCGCGAAG TGAGGAGAGGTTTTTGGTGAAAAAAAAAAAGAAAACCACCCAGTCTGTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT           ]
[+] EMBL BM607954             [                                                                                                                   CCGCTAGTCTTTCTGCCTGTTCGGTCAACTCGTCCAAAGCCAATCCAACCT CCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGGGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGGCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCGAAG TGTGGAGAGGTTTTTGGTG   AAAAAAAAGAAAACCACCCAGTCTGTGTGCAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTCGGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGTCAGT       ]
[+] EMBL BM576657             [                                                                                                                   CCGCTAGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATTCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT           ]
[+] EMBL BM610592             [                                                                                                                   CCGCTAGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATCCGACCTCCCCCCAAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGGCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCAAAGTTGAGGAGAGGTTTTTGGTG   AAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGATGATGTTTTGGCGTCGGCGAGT                                          ]
[+] EMBL BM598160             [                                                                                                                     ccgAGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATTCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT           ]
[+] EMBL BM606367             [                                                                                                                     ccgAGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATCCGACCTCCCCCCAAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGGCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCAAAG TGAGGAGAGGTTTTTGGTG   AAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGATGATGTTTTGGCGTCGGCGAGTG                                         ]
[+] EMBL BM606971             [                                                                                                                      ccgGTCTTTCTGCCTGTTCGGTCAACTCGTCCAAAGCCAATCCAACCT CCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCAATCCTTTTGGGCGTGTGCGTACTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGTGCTCCGGCACACGCTGGCGGCCATCAGTACCACCAGCACGGTGGCCATCATGGCGGATATCGTGCGTTCGAGCAGGCCGAATCCGAAGCTGATGCGGAATGAGTGCGGCGCGAAG TGAGGAGAGGTTTTTGGTGAAAAAAAAAAAGAAAACCACCCAGTCTGTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT           ]
[+] EMBL BM590524             [                                                                                                                      ccgGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATTCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT           ]
[+] EMBL BM586124             [                                                                                                                      ccgGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATTCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCATCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAG                                           ]
[+] EMBL BM611024             [                                                                                                                      ccgGTCTTTCTGCCTGTTCGGTCCATTCGTTCAAAGCCAATTCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGA                                                ]
[+] EMBL BM589163             [                                                                                                                      ccgGTCTTTCTGCCTGTTCGGTCAACTCGTCCAAAGCCAATCCAACCT CCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGGGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGGCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCGAAG TGTGGAGAGGTTTTTGGTG   AAAAAAAAGAAAACCACCCAGTCTg                                                                                      ]
[+] EMBL BM588252             [                                                                                                                        ccgCTTTCTGCCTGTTCGGTCAACTCGTCCAAAGCCAATCCAACCT CCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGGGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGGCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCGAAG TGTGGAGAGGTTTTTGG T  AAAAAAAAAGAAAACCACCCAGTCTGTGTGCAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTCGGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGTAA         ]
[+] EMBL BM587814             [                                                                                                                        ccgCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATCCGACCTCCCCCCAAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGGCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCAAAG TGAGGAGAGGTTTTTGGTG   AAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGATGATGTTTTGGCGTCGGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT           ]
[+] EMBL BM607471             [                                                                                                                                  CCGGTTCGGTCAACTCGTCCAAAGCCAATCCAACCT CCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCAATCCTTTTGGGCGTGTGCGTACTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGTGCTCCGGCACACGCTGGCGGCCATCAGTACCACCAGCACGGTGGCCATCATGGCGGATATCGTGCGTTCGAGCAGGCCGAATCCGAAGCTGATGCGGAATGAGTGCGGCGCGAAG TGAGGAGAGGTTTTTGGTGAAAAAAAAAAAGAAAACCACCCAGTCTGTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGG                                                     ]
[+] EMBL BM615597             [                                                                                                                                       cCGGTCAACTCGTCCAAAGCCAATCCAACCT CCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCAATCCTTTTGGGCGTGTGCGTACTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGTGCTCCGGCACACGCTGGCGGCCATCAGTACCACCAGCACGGTGGCCATCATGGCGGATATCGTGCGTTCGAGCAGGCCGAATCCGAAGCTGATGCGGAATGAGTGCGGCGCGAAG TGAGGAGAGGTTTTTGGTGAAAAAAAAAAAGAAAACCACCCAGTCTGTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT           ]
[+] EMBL BM597764             [                                                                                                                                              ccgCGTTCAAAGCCAATTCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACATTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGC                                              ]
[+] EMBL BM586652             [                                                                                                                                               ccgGTTCAAAGCCAATTCGACCTCCCCCCCAGAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGTAAAAAAAATCG]
[+] EMBL BM615881             [                                                                                                                                                                          CCCATAGACAACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGCAGCGCACAGTACGGTGGCTATGCACCGCATCCTAAGCCAGCGCCGAAACCGGCGGCCTACCATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCCGGGCATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCAGT         ACGGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACGCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGA                                                ]
[+] EMBL BM580197             [                                                                                                                                                                                                                                                                                                                                                                      ATCATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCGTGCGCTCCGGCACACGCTGGCGTCCATCATT         ACCGTGGCCATCATGGCGGATACCGTGCGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGACCCGAAG TGAGGAAAGGTTTTTGGCG  AAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGGTGATG                                                           ]


>consensus_9847#0 CCGACTTCTTCGATTGGCAAGCAGATTAAGCGTGTGTCTCCGTACCGCAGCAAATGTGAG CAATGTGTGTCGGCCTATAAATAGGTGTTCCGTCAATTCGATCTTTCATCATCGCCCGCT AGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATCCGACCTCCCCCCCAGAGACA ACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGC AGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTAC CATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCAT CATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCG TGCGCTCCGGCACACGCTGGCGGCCATCAGTACGGTGGCCATCATGGCGGATACCGTGCG TTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCGAAGTGAGGAGAGGT TTTTGGCGAAAAAAAAAGAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGCTGAT GTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGTAAGTAAAATCG



consensusID : consensus_9847#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 227
fasta sequence
                              [CCGACGGTGGCCATCAGTACCACCAGCACGGTGGCCATCATGGCGGATATCGTGCGTTCGAGCAGGCCGAATCCGAAGCTGATGCGGAATGAGTGCGGCGCGAAGTGAGGAGAGGTTTTTGGTGAAAAAAAAAAAGAAAACCACCCAGTCTGTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT]

[+] EMBL BM592812             [CCGACGGTGGCCATCAGTACCACCAGCACGGTGGCCATCATGGCGGATATCGTGCGTTCGAGCAGGCCGAATCCGAAGCTGATGCGGAATGAGTGCGGCGCGAAGTGAGGAGAGGTTTTTGGTGAAAAAAAAAAAGAAAACCACCCAGTCTGTGTGAAAAGCTGTCTTTCTGGCTGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT]


>consensus_9847#1 CCGACGGTGGCCATCAGTACCACCAGCACGGTGGCCATCATGGCGGATATCGTGCGTTCG AGCAGGCCGAATCCGAAGCTGATGCGGAATGAGTGCGGCGCGAAGTGAGGAGAGGTTTTT GGTGAAAAAAAAAAAGAAAACCACCCAGTCTGTGTGAAAAGCTGTCTTTCTGGCTGATGT TTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9847#0      CCGACTTCTTCGATTGGCAAGCAGATTAAGCGTGTGTCTCCGTACCGCAGCAAATGTGAG 60
consensus_9847#1      ------------------------------------------------------------
                                                                                  

consensus_9847#0      CAATGTGTGTCGGCCTATAAATAGGTGTTCCGTCAATTCGATCTTTCATCATCGCCCGCT 120
consensus_9847#1      ------------------------------------------------------------
                                                                                  

consensus_9847#0      AGTCTTTCTGCCTGTTCGGTCCACTCGTTCAAAGCCAATCCGACCTCCCCCCCAGAGACA 180
consensus_9847#1      ------------------------------------------------------------
                                                                                  

consensus_9847#0      ACGATGCAGTCCTTCACCGTCGTAGCGGCTCTCCTTTTGGGCGTGTGCGTGCTGAGCTGC 240
consensus_9847#1      ------------------------------------------------------------
                                                                                  

consensus_9847#0      AGCGCACAGTACGGTGGCTATGCACCGCATCCGAAGCCAGCGCCGAAACCGGCGGCCTAC 300
consensus_9847#1      ------------------------------------------------------------
                                                                                  

consensus_9847#0      CATCATGCACCGGCACCGGCGATGCACCACGGAGGCTACCACGGCGGCAAGGCTGGCCAT 360
consensus_9847#1      ------------------------------------------------------------
                                                                                  

consensus_9847#0      CATGTGCCGTGCGGCTCGAACCTGCTCGTCTCCTGCTCACCCCACGTAGCGCCCGTCCCG 420
consensus_9847#1      ------------------------------------------------------------
                                                                                  

consensus_9847#0      TGCGCTCCGGCACACGCTGGCGG--CCATCAGTACGGTGGCCATCATGGCGGATACCGTG 478
consensus_9847#1      ------CCGACGGTGGCCATCAGTACCACCAGCACGGTGGCCATCATGGCGGATATCGTG 54
                            *** *    **   * *  *** *** ********************** ****

consensus_9847#0      CGTTCGAGCAGGCCGAATCGGAAGCTGATGCGGAATGAGTGCGGCGCGAAGTGAGGAGAG 538
consensus_9847#1      CGTTCGAGCAGGCCGAATCCGAAGCTGATGCGGAATGAGTGCGGCGCGAAGTGAGGAGAG 114
                      ******************* ****************************************

consensus_9847#0      GTTTTTGGCGAAAAAAAAA--GAAAACCACCCAGTCTCTGTGAAAAGCTGTCTTTCTGGC 596
consensus_9847#1      GTTTTTGGTGAAAAAAAAAAAGAAAACCACCCAGTCTGTGTGAAAAGCTGTCTTTCTGGC 174
                      ******** **********  **************** **********************

consensus_9847#0      TGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGTAAGTAAA 656
consensus_9847#1      TGATGTTTTGGCGTGAGCGAGTGATAATAAAACTGGCGAATGTTAGAATGCGT------- 227
                      *****************************************************       

consensus_9847#0      ATCG 660
consensus_9847#1      ----
                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)