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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9860#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1377 fasta sequence
[GTTATGCAAACGGTATATTTTATTTCTTTCT-GTAAGGCTTGCGAA-GCAATCGTTGAATTCCACACACACGAGACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCACAAAA-CAAACATCT-GGATCGTAGATGAAGGAAGATGGCAC-TGACAAAAACT-GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC-CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG-TTCGTCAC-GTCTG-CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACGGCCAACAGCGAATGGAGGATCATT----TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG--TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG-AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC-GACGCCGCAAGAGGTGACCGGACGCGTGGGCGG]
[+] EMBL CNS093T4 [GTTATGCAAACGGTATATTTTATTTCTTTCT GTAAGGCTTGCGAA GCAATCGTTGAATTCCACACACACGAAACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCACAAAA CAAACATCT GGGTCGTAGATGAAGGAAGATGACAC TGACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACA CACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAAAACCCGGGCATCGATGTTTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAACTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGT ]
[+] EMBL CNS09JJF [ GCAAACGGTATATTTTATTTCTTTCTCGTAAGGCTTGCGAAGGCAATCGTTGAATTCCACACACACGAGACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCACAAAA CAAACATCTCGGATCGTAGATGAAGGAAGATGGCACTTGACAAAAACTCGCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGACACGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTTCCAAGCTCATCGG ]
[+] EMBL CNS095DV [ GGTATATTTTATTTCTTTCT GTAAGGCTTGCGAAGGCAATCGTTGAATTCCACACACACGAGACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCACAAAA CAAACATCT GGGTCGTAGATGAAGGAAGATGGCAC TGACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAA ]
[-] EMBL BX608970 [ TGGAATAAAGACACGTGAGCACAAAA CAAACATCT GGATCGTAGATGAAGGAAGATGGCAC TGACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAAAGGTCATAGTTCGTACCGGACGGGTTAATGCGGCCACCGTATCCCGTCGATTGAT ]
[-] EMBL BX617886 [ AAGACACGTGAGCACAAAACCAAACATCT GGATCGTAGATGAGGAAAGATGGCAC TGACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAG ]
[-] EMBL BX613486 [ GACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTAAACACTTCGCTCCCATACCAGATGCCCA ]
[-] EMBL BX613084 [ AACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAG ]
[-] EMBL BX622068 [ AGGCGTAGGTTGNGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGCTGCTGGTTTNGCTGCTCGTACGAGCTGCTNGGGCTCCGAACGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTNGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTGGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGNGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGT TTTTTTTCGATACACTTATTCGTTGCTTATTGCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGNTAATCACTTTGCTCGNTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC GACGCCGC ]
[-] EMBL BX622391 [ AGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCC ]
[-] EMBL BM622267 [ GATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCACTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC GACGCCGCAAGCGG ]
[-] EMBL BM582222 [ GTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCACTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACCGGACGCgtgggcgg ]
[-] EMBL BM589296 [ TTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTACACTCGTTTTTTTTTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCAACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC GACcgg ]
[-] EMBL BM628549 [ GCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATAC GGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGACGAGCTGGATCCGTACCCTTGCGGAACACTTCCGGCAGACGCGTACTCCAGCACAAAACCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCCT ACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAATACAAGCGAGAACCGAAACCGAACC GACGCCGCAAGAGATGACCGGACGCGTGGGCGG]
[-] EMBL BX621777 [ CTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCACTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAAC ]
[-] EMBL BX628618 [ CTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTGGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGT TTTTTTTCGATACACTTATTCGTTGCTTATTGCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGC ]
[-] EMBL BM624433 [ CGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTACACTCGTTTTTTTTTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCAACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC GACGCCGCAAGAGcgg ]
[-] EMBL BX619392 [ GAGGTTGTCGCGTTTCGTCACGGTCTGCCCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGT TTTTTTTCGATACACTTATTCGTTGCTTATTGCTACGCGAAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCG ANCCGAcctcgtg ]
[-] EMBL BX603841 [ ATCCGTACAGTGTTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCACTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGC ]
consensusID : consensus_9860#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 749 fasta sequence
[CAGACCGCGACGCCGCAACAGATTGCGGATGCTTGAATATCCTCC-GTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCCACGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCGAGCTGGATCCGTACCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCGTTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCGAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT]
[-] EMBL CNS09JJE [CAGACCGCGACGCCGCAACAGATTGCGGATGCTTGAATATCCTCC GTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCCACGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCGAGCTGGATCCGTACCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCGTTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCGAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT]
[-] EMBL CNS093T3 [ ATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTG CACGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCGAGCTGGATCCGTACCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCGTTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCGAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT]
[-] EMBL CNS095DU [ GACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCGAGCTGGATCCGTACCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCGTTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCGAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT]
consensusID : consensus_9860#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 610 fasta sequence
[TGTTGTCGCGTTTCGTCTACGGTCTGGCCAGTTGGATTACCAACGCAGGTTTTTGTAGACCCGATTGCGCCCTCCTCGCGACCTTGGTGCGCTGGCCGTGATCCACTTCGTCTCCCCANACCAGAGTGCCCATAATCTGGTCAAATGTCGAGCCCCATCGCTGGGGATTGAAATCCCGTACAGTGCTGCGAGGGACCAGTGCCACGGTTTTTCTCGCCGAGCTGGTATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACTNGATATACCACATTATAGTACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGTTTTTTTTCGATACACTTATTCGTGGCTTATTGTCTACGCAGAACGTTCACAATCTGATCACGGGGAAGCCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTGTCCCAACATAACGCAGCTTTAACCCACACACTTCTCTATGGTTGCCAGAAGCTTCAACACATCAGACGACTCGAAACACAGNGCGAGANCGGAACNCGCGCACGACGACGCCGCNTTNAGCCAGGGTTCGNGCCTG]
[-] EMBL BX468303 [TGTTGTCGCGTTTCGTCTACGGTCTGGCCAGTTGGATTACCAACGCAGGTTTTTGTAGACCCGATTGCGCCCTCCTCGCGACCTTGGTGCGCTGGCCGTGATCCACTTCGTCTCCCCANACCAGAGTGCCCATAATCTGGTCAAATGTCGAGCCCCATCGCTGGGGATTGAAATCCCGTACAGTGCTGCGAGGGACCAGTGCCACGGTTTTTCTCGCCGAGCTGGTATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACTNGATATACCACATTATAGTACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGTTTTTTTTCGATACACTTATTCGTGGCTTATTGTCTACGCAGAACGTTCACAATCTGATCACGGGGAAGCCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTGTCCCAACATAACGCAGCTTTAACCCACACACTTCTCTATGGTTGCCAGAAGCTTCAACACATCAGACGACTCGAAACACAGNGCGAGANCGGAACNCGCGCACGACGACGCCGCNTTNAGCCAGGGTTCGNGCCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9860#0 GTTATGCAAACGGTATATTTTATTTCTTTCTGTAAGGCTTGCGAAGCAATCGTTGAATTC 60
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 CACACACACGAGACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCAC 120
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 AAAACAAACATCTGGATCGTAGATGAAGGAAGATGGCACTGACAAAAACTGCTGCTGCTA 180
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 TTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCA 240
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 GAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGC 300
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 GCACCGAAGTTGTCGACAGACCGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCT 360
consensus_9860#1 ----------------CAGACCGCGACGCCGCAACAGATTGCGGATGCTT-GAATATCCT 43
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 CCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCA 420
consensus_9860#1 CCG-TCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCA 102
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 GACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGC 480
consensus_9860#1 GACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCCACGTGC 162
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 CGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCC 540
consensus_9860#1 CGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCC 222
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 AGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGT 600
consensus_9860#1 AGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGT 282
consensus_9860#2 -------------------------------------------TGT-TGTCGCGTTTCGT 16
** ** ** ****
consensus_9860#0 CCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGC 660
consensus_9860#1 CCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGC 342
consensus_9860#2 CTACGGTCTGGC--CAGTTGGATTACCAACGCAGGTTTT--TGTAGAC-CCGATTGC-GC 70
* ** *** **** * *** * * * ** * * * *** * **
consensus_9860#0 CCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGC 720
consensus_9860#1 CCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGC 402
consensus_9860#2 CCTCCTCGCGACCTTGGTG----CGCTGGCCGT--GATCCACTTCGTCTC---------C 115
*** ** ** * *** ** **** *** ** * ** * *** *
consensus_9860#0 TCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGC 780
consensus_9860#1 TCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGC 462
consensus_9860#2 CCANACCAGAGT-------GCCCATAATCTGGTCAAATGTCGAGCCCCATCGCTGGGGAT 168
* *** ** * * ** ***** * *** ** * * * *
consensus_9860#0 GGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCA 840
consensus_9860#1 GGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCC- 521
consensus_9860#2 TG-----AAATCCCGTACAGTG-CTGCGAGGGACCAGTGCCACGGTTTTT---CTCGCC- 218
* ******* * ** * * ** * ** * * ***
consensus_9860#0 GGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGA 900
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 TCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGAT 960
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 ------------------------------------------------------------
consensus_9860#0 TGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGG-ATCCG 1019
consensus_9860#1 -----------------------------------------------GAGCTGG-ATCCG 533
consensus_9860#2 -----------------------------------------------GAGCTGGTATCCG 231
******* *****
consensus_9860#0 TACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAA----CCACAA---AA 1072
consensus_9860#1 TACC-TTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAC----CCACAA---AA 585
consensus_9860#2 TACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACTNGATATACCACATTATAG 291
**** ************************************ ***** *
consensus_9860#0 GACGGCCAACAGCGAATGGAGGATCATTTT----GCTGTGCACTTTCGTCACTTGTTGTT 1128
consensus_9860#1 GACGGCCAACAGCGAATGGAGGATCATTTT----GCTGTGCACTTTCGTCACTTGTTGTT 641
consensus_9860#2 TACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTT 351
** ************************** **************************
consensus_9860#0 GTTTAATTTATTCTCGTTTTAGT-CGATACACTTATTCGTTGCTTATT-CCTACGC-GAA 1185
consensus_9860#1 GTTTAATTTATTCTCGTTTTAGT-CGATACACTTATTCGTTGCTTATT-CCTACGC-GAA 698
consensus_9860#2 GTTTAATTTATACTCGTTTTTTTTCGATACACTTATTCGTGGCTTATTGTCTACGCAGAA 411
*********** ******** * **************** ******* ****** ***
consensus_9860#0 CGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTAC 1245
consensus_9860#1 CGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT--------- 749
consensus_9860#2 CGTTCACAATCTGATCACGGGGAAGCCCTTGAAACTGTTAATCACTTTGCTCGCTACTAC 471
************************* *************************
consensus_9860#0 TTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACAC 1305
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 TTGTCCCAACATAACGCAGCTTTAACCCACACACTTCTCTATGGTTGCCAGAAGCTTCAA 531
consensus_9860#0 ATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACCGACGCCGCAAGAGGTGACCGG 1365
consensus_9860#1 ------------------------------------------------------------
consensus_9860#2 CACATCAGACGACTCGAAACACAGNGCGAGANCGGAACNCGCGCACGACGACGCCGCNTT 591
consensus_9860#0 ACGCGTGGGCGG------- 1377
consensus_9860#1 -------------------
consensus_9860#2 NAGCCAGGGTTCGNGCCTG 610
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||