These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9864#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 756 fasta sequence [CAGAATCCCCGAGGTTTAACCGTTCAGTCGAACAGAAGT-ATTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATTATTTTTGTTGCAAATGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGATGTGGCAAGTATTGCCGGTTTGGACCTGGCATGATAATAAACTTCCTACAGACTATTTCGAAAACCGTATTCCAGATTTGTTGCCCGCACCCCGGCATTGAGCTGCCACGCAACACATGTGGTTTAACAAACAAAACACAGAAAAGCACGCAACTGCCATACTCAAAACGCTGTCACGTACAGCTCTTACCCCGAGCTTACGCGACACTCGACGAAACGCTAAATTCTTAGCTTATGACAGTTCACTTCACTCAAATTGGTACAATTTCCATCCTAACAAATTGTCAAACTCTCCACANNTANCACTTACACGCTCTCTTGCTAAACTGTTTGCANAATCCGCCTAAAATACACAGAAATAACCGAATTTTCTACACGAATTGTNCTGACACATATGTACACNTAAA] [+] EMBL AL695075 [CAGAATCCCCGAGGTTTAACCGTTCAGTCGAACAGAAGT ATTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATTATTTTTGTTGCAAATGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGATGTGGCAAGTATTGCCGGTTTGGACCTGGCATGATAATAAACTTCCTACAGACTATTTCGAAAACCGTATTCCAGATTTGTTGCCCGCACCCCGGCATTGAGCTGCCACGCAACACATGTGGTTTAACAAACAAAACACAGAAAAGCACGCAACTGCCATACTCAAAACGCTGTCACGTACAGCTCTTACCCCGAGCTTACGCGACACTCGACGAAACGCTAAATTCTTAGCTTATGACAGTTCACTTCACTCAAATTGGTACAATTTCCATCCTAACAAATTGTCAAACTCTCCACANNTANCACTTACACGCTCTCTTGCTAAACTGTTTGCANAATCCGCCTAAAATACACAGAAATAACCGAATTTTCTACACGAATTGTNCTGACACATATGTACACNTAAA] [+] EMBL BX625847 [ agACCGTTCAGTCGAACAGAAGTAATTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATTATTTTTGTTGCAAATGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGATGTGGC AGTATTG CGG TTGGACCTGGCATGATAAT AAC TCCTACAGACTA TTCG AAACCGTA TCCAGA TTGTTGCCCGCA CCCGGCATTGAG TG CA G AA A ATGTGGTTTAA AAACAAAACACAG AAAGCA G AA TGCCATACTCAAAA G TGTCACGTACAG TCTTACCCCGAG TTACGCGACACTCGA GAAACGCT AATTCTTAG TTATGACAGTTCA ] consensusID : consensus_9864#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 705 fasta sequence [CCGGCTTGGTGACTTCAGACCGTTCAGTCGAACAGAATCGTAAACTTTGCTAATTTTATACGACATTCGTCCACACAATTAAGTTACACAATATGAAGCCGTCAACGAACGTTAAAGTGCTAGCCACATTATTTTTGTTGCAAATGACCTTTCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAAGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGCAGTATTGCGGTTGGGCCTGGAATGATAATAACTCCTACAGACTATTCAAAACCGTATCCTGATTGTTGCCCGCACCCGGCATTGAGTGCAGAAAATGTGGTTTAAAAACAAAACACAGAAAACAGAATACCATACTCAAAAGTGTCACGTATAGTTTTAGTACAGAGTTACGCGACACTAGAGTTACGCTAATTCTTAGTTTTGACAGTTCATTTATCAAATTGGTACAATTTAAATCTAAACAAAGCCAATTTC-AAAATAAATTGCAGTTTTAGCATAATGTTTGAAATCGCTAAATACACAGAAATGACCGAAATTTTCTACACAAATTGTATGGCATAAGTAACAATAAACATTACATTATTAC] [+] EMBL BM649532 [CCGGCTTGGTGACTTCAGACCGTTCAGTCGAACAGAATCGTAAACTTTGCTAATTTTATACGACATTCGTCCACACAATTAAGTTACACAATATGAAGCCGTCAACCAACGTTAAAGTGCTAGCCACATTATTTTTGTTGCAAATGACCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAGGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGCAGTATTGCGGTTGGGCCTGGAATGATAATAACTCCTACAGACTATTCAAAACCGTATCCAGATTGTTGCCCGCACCCGGCATTGAGTGCAGAAAATGTGGTTTAAAAACAAAACACAGAAAACAGAATACCATACTCAAAAGTGTCACGTATAGTTTTAGTACAGAGTTACGCGACACTAGAGTTACGCTAATTCTTAGCTTTGACAGTTCATTTATCAAATTGGTACAATTTAAATCTAAACAAAGCCAATTTCAAAAATAAATTGCAGTTTTAGCAT ] [+] EMBL BX625578 [ ACTTTGCTAATTTTATACGACATTCGTCCACACAATTAAGTTACACAATATGAAGCCGTCAACGAACGTTAAAGTGCTAGCCACATTATTTTTGTTGCAAATGACCTTTCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAAGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGCAGTATTGCGGTTGGGCCTGGAATGATAATAACTCCTACAGACTATTCAAAACCGTATCCTGATTGTTGCCCGCACCCGGCATTGAGTGCAGAAAATGTGGTTTAAAAACAAAACACAGAAAACAGAATACCATACTCAAAAGTGTCACGTATAGTTTTAGTACAGAGTTACGCGACACTAGAGTTACGCTAATTCTTAGTTTTGACAGTTCATTTATCAAATTGGTACAATTTAAATCTAAACAAAGCCAATTTC AAAATAAATTGCAGTTTTAGCATAATGTTTGAAATCGCTAAATACACAGAAATGACCGAAATTTTCTACACAAATTGTATGGCATAAGTAACAATAAACATTACATTATTAC] [+] EMBL BX623222 [ CTTTTCTNNTTTTATACGACATTCGTCCACACAATTAAGTTACACAATATGAAGCCGTCAACGAACGTTAAAGTGCTAGCCACATTATTTTTGTTGCAAATGACCTTTCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAAGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGCAGTATTGCGGTTGGGCCTGGAATGATAATAACTCCTACAGACTATTCAAAACCGTATCCTGATTGTTGCCCGCACCCGGCATTGAGTGCAGAAAATGTGGTTTAAAAACAAAACACAGAAAACAGAATACCATACTCAAAAGTGTCACGTATAGTTTTAGTACAGAGTTACGCGACACTAGAGTTACGCTAATTCTTAGTTTTGACAGTTCATTTATCAAATTGGTACAATTTAAATCTAAACAAAGCCAATTTC AAAATAAATTGC ] consensusID : consensus_9864#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 622 fasta sequence [CCGCTAGCATTGGCTCTATCACAACTCACCGAGAGCTTGGTGACTTCTCGTCGATCACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGGATCAAATTATATATTATGGGGCCGTCAACAAACTTTAAAGTGCTAGTCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATATTGCTGGATGTGGAGTCATTGGGGTAGGACCTGGAATGGTTTTAACTAAGACAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATTACCGCAGAAGATTCAAATTAAAATCAAAACATAATGCTAAAACGTGTCATGAATTTGATCATTTGATCAAGTTAAAAAATACTAATCAGCTCGCATTTTATTCTCGGAACGACGCATAAACTAGAACAAAACAAATAATGCTGAATAAAAAAAAATCC] [+] EMBL BM595266 [CCGCTAGCATTGGCTCTATCACAACTCACCGAGAGCTTGGTGACTTCTCGTCGATCACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGGATCAAATTATATACTATGGGGCCGTCTACAAACTTTAAAGTGCTAGTCACATTAGTTTTGTTGCAAATTATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGC ] [+] EMBL BM593848 [ CCG GAGCTTGGTGACTTCTCGTCGATCACTCGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAATACTTAGCTTTTAAAAACAGGATCAAATTATATATTATGGGGCCATCAATCAACTTTAAAGTGGTAGTCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGTCAAGTTCAAGAAGGGAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATATTGCTGGATGTGGAGTCATTGGGGTAGGACCTGGAATGGTTTTAACTAAAACAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATTACCGCAGAAGATTCAAATTGAAATCAAAACATAATGCTAAAACGTGTCATACATTTGATCATTTGATCAAGTTAAAAAATACTAATCAGCTCGCATTTTATTCTCGGAACGACGCATAA ] [+] EMBL BM588869 [ ccgGACTTCTCGTCGTTTACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGAATCAAATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAATGGTTTTAACTAAGATAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATGAACGCAGAAGATTCAAATTAAAATCAAAACATAATGCTAAAACGTGTCATGAATTTGATCATTTGATCAAGTGAAAGATTGCTAATCAGCCCGCATTTTATTCTCGAAACAACGCATAAACTAGAACAAAACAAATAATGCTGAATAAAAAAAAATCC] [+] EMBL BM655485 [ ccGGGGCCATCAATAAACTTTAAAGTGGTAGTCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGTCAAGTTCAAGAAGGGAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTGAATGAGGAACGACAGCGTCCCGGGAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATATTGCAGGATGTGGAGTCATTGGGGTAGGACCTGGAATGGTTTTAACTAAGACAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATTACCGCAGAAGATTCAAATTAAAATCAAAACATAGTGCTAAAACGTGTCATGAATTTGATCATTTGATCAAGTTAAAAAATACTAATCAGCTCGCATTTTATTCTCGGAACGACGCATAAACTAGAACAAAACAAATCATACTGAATAAAAAAAAtgc ] [+] EMBL CNS08XG9 [ gTTGCTGGATGTGGAGTTATTGGGGTAGGACCTGGAATGGTTTTAACTAAGACAGACTATTCAAAACCGTATCCAGATTGCTGTCCCCAA ] consensusID : consensus_9864#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 619 fasta sequence [CCCAGGTTATCCTCGTTTACACNACGTTACAATAATTATTTTCAACATTCTTAAGCTAAAAACAGTTAGCTTTTAATAACAGCAATCAACATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAACATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAATGGTTTTAACTAAGATAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATGAACGCAGAAGATTCAAATTAAAATCAACAACATAATGCTAAAACGTGTCATGAATTTGATCATTTGATACAAGTGAAAGATTGCTAATCAGCCCGCA-TTTATTCTCGAAACAACGCATAAACTAAACAAAACAAATAATGCTGAATANACCACNCANAATCCAAAACATAAACANNACNCCANACACA] [+] EMBL AL933373 [CCCAGGTTATCCTCGTTTACACNACGTTACAATAATTATTTTCAACATTCTTAAGCTAAAAACAGTTAGCTTTTAATAACAGCAATCAACATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAACATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAATGGTTTTAACTAAGATAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATGAACGCAGAAGATTCAAATTAAAATCAACAACATAATGCTAAAACGTGTCATGAATTTGATCATTTGATACAAGTGAAAGATTGCTAATCAGCCCGCA TTTATTCTCGAAACAACGCATAAACTAAACAAAACAAATAATGCTGAATANACCACNCANAATCCAAAACATAAACANNACNCCANACACA] [+] EMBL BM649558 [ ccgGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAA ATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATTATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAATGGTTTTAACTAAGATAGACTATTCTAAACCGTATCCAGATTGCTGTCCCCAAGTGAAAATGAACGCAGAAGATTCAAATTAAAATCAA AACATAATGCTAAAACGTGTCATGAATTTGATCATTTGAT CAAGTGAAAGATTGCTAATCAGCCCGCATTTTATTCTCGAAACAACGCATAAACTAgaa ] [-] EMBL CNS08XGA [ TCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGA ] consensusID : consensus_9864#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 579 fasta sequence [CCGCTAGTTCTAGATCGCGAGCTTGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGTTTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCATAATAATAAAAAAATAAAACGATTTAATTCAAGTA] [+] EMBL BM606344 [CCGCTAGTTCTAGATCGAGAGCTTGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGTTTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCAT ] [+] EMBL BM634705 [ ccgGCTTGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGTTTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCATAATAAT ] [+] EMBL BX621321 [ gcacgaggGGTGNGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAACACTAAATCGTGAACCTGCTAATTTTATACGACATTTGTCCACACAATTAAGTTACACATGATGAAGACGTCAACCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTGCAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTCGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGATTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCATAATAATAAAAAAATAAAACGATTTAATTCAAGTA] [+] EMBL BM600731 [ ccgGGTGAGTTCAGACCGATCAATCGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGCTACACATGATGAAGTCGTCAACCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTCGTAACACAAAAAGTCAAGTTCAAGAAAATAGCTGCTACGATGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGATTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGGCATGATTTTGATAATTTGATATGAAAAGATTCCATAA ] [+] EMBL BM592712 [ ccGAGTTGAAATAAGTTCCAACATTAAATCGTAAACCTGCTAATTTTATACGACATTTGTCCACACAATCAAGTTACACATGATGAAGTCGTCAACCAACTTTAAAGTGCTAGCCACATTAGTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTT ] [+] EMBL BM647512 [ TAATTTTATACGACATTTGTCCACACAATCGAGTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTATCCACATTACTTTTGTTACAAATGATCTATTTAGTATCGTTTTCACATGCATATACATTCCTGATTACTAACACGAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGCTACAAATAAATGTTCCTGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGGTGCAGTGATGATTATTCACTTCATGGTATTGGATGTGGTTTTTTTGCGGTTGGGCCTGGCATGGTGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGATAAAACAGACTGAACAAGACTTGTTTTAAAAACAGAACAAACGCAACGCTGAAACGTGACATGATTTTGATAATTTGATATGAAATGATTCCATAAT ] consensusID : consensus_9864#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence [AGCAGAATCCGCACGANTGAGCTTGGTGACTTCTCGTCGTTCACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGAATCAAATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACGTACAGAATAAGATGTTCCTGGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATGATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAAATGGTTTTAACTAAAATAGACTATTCTAAACCGTATCCAGGATTGGCTGTCCCCAAAGGTGAACACTGAAACGCAGAAGATTTCCAAGTTNNACGAGTCCGANAGCCGTTNACGTGGCGTCGAAACG] [+] EMBL BX468883 [AGCAGAATCCGCACGANTGAGCTTGGTGACTTCTCGTCGTTCACACGAGTTAAAATAAGTTATTTTCAAATTTTAAGCTAAAAACAGTTAGCTTTTAATAACAGAATCAAATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATCACATTAGTTTTGTTGCAAATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACATGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACGTACAGAATAAGATGTTCCTGGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGCTGCAGTGATGATGATTCACTTCATGTTGCTGGATGTGGAGTTATTGGGGTTGGACCTGGAAATGGTTTTAACTAAAATAGACTATTCTAAACCGTATCCAGGATTGGCTGTCCCCAAAGGTGAACACTGAAACGCAGAAGATTTCCAAGTTNNACGAGTCCGANAGCCGTTNACGTGGCGTCGAAACG] consensusID : consensus_9864#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence [GAATCGCCACGAGGTNCGTAGTGCTTGGTGACTTCAGGACCGCNTCAGGTCGAACAGAAGTAATNTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATATATTTTTGTTGCAAAGTGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGGATGTGGCAGTATTGCGGTTGGACCTGGCATGATAATAACGTCCTACAGACTATTGCGAAACCGTATCCAGATGGTTGACCCGCGACCACGGCCATTGAGTGCAGGAAAAGTGTGGTTTAAAAACANAAACACAG] [+] EMBL BX468970 [GAATCGCCACGAGGTNCGTAGTGCTTGGTGACTTCAGGACCGCNTCAGGTCGAACAGAAGTAATNTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATTCGTCCTCACAATTAAGTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCCACATATATTTTTGTTGCAAAGTGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACATCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGCTAAAAATAAATGTTCCTGTAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGCTGCAGTGACGATTATTCGCTTCATGTTGCTGGGATGTGGCAGTATTGCGGTTGGACCTGGCATGATAATAACGTCCTACAGACTATTGCGAAACCGTATCCAGATGGTTGACCCGCGACCACGGCCATTGAGTGCAGGAAAAGTGTGGTTTAAAAACANAAACACAG] consensusID : consensus_9864#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 94 fasta sequence [CCGCCCGCGCGTCCGGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAGCACTAGATCGTGAACCTGCTAATTTTATACGACATTTG] [+] EMBL BM587259 [CCGCCCGCGCGTCCGGGTGAGTTCAGACCGATCAATTGAGTTGAAATAAGTTCCAGCACTAGATCGTGAACCTGCTAATTTTATACGACATTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9864#0 -------------------------------CAGAATCCCCGAGGTTTA-ACCGTTC--A 26 consensus_9864#1 -------------------------------CCGGCTTGGTGACTTCAG-ACCGTTC--A 26 consensus_9864#6 ------------GAATCGCCACGAGGTNCGTAGTGCTTGGTGACTTCAGGACCGCNTCAG 48 consensus_9864#4 -------------CCGCTAGTTCTAGATCGCGAGCTTGG-TGAGTTCAG-ACCGATC--A 43 consensus_9864#7 -----------------------CCGCCCGCGCGTCCGGGTGAGTTCAG-ACCGATC--A 34 consensus_9864#2 CCGCTAGCATTGGCTCTATCACAACTCACCGAGAGCTTGGTGACTTCTC-GTCGATC-AC 58 consensus_9864#3 --------------------------------------CCCAGGTTATC-CTCGTTT-AC 20 consensus_9864#5 --------------AGCAGAATCCGCACGANTGAGCTTGGTGACTTCTC-GTCGTTC-AC 44 * ** consensus_9864#0 GTCGAACAGAAGTA--TTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATT 84 consensus_9864#1 GTCGAACAGAA-------------------TCGTAAACTTTGCTAATTTTATACGACATT 67 consensus_9864#6 GTCGAACAGAAGTAATNTTCCTATATTGAATCGTAAACTTTGCTAATTTTATGCGACATT 108 consensus_9864#4 ATTGAGTTGAAATAA-GTTCCAACATTAAATCGTAAACCT-GCTAATTTTATACGACATT 101 consensus_9864#7 ATTGAGTTGAAATAA-GTTCCAGCACTAGATCGTGAACCT-GCTAATTTTATACGACATT 92 consensus_9864#2 ACGA-GTTAAAATAAGTTATTTTCAAA---TTTTAA-----GCTAAAAACAGTTAGCTTT 109 consensus_9864#3 ACNACGTTACAATAA-TTATTTTCAACAT-TCTTAA-----GCTAAAAACAGTTAGCTTT 73 consensus_9864#5 ACGA-GTTAAAATAAGTTATTTTCAAA---TTTTAA-----GCTAAAAACAGTTAGCTTT 95 * * * * ***** * * ** consensus_9864#0 CGTCCTCAC-AATTAA-GTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCC 142 consensus_9864#1 CGTCCACAC-AATTAA-GTTACACAATATGAAGCCGTCAACGAACGTTAAAGTGCTAGCC 125 consensus_9864#6 CGTCCTCAC-AATTAA-GTTACACAGTATGAAGCCGTCAACCAACGTTAAAGTGGTAGCC 166 consensus_9864#4 TGTCCACAC-AATCAA-GTTACACATGATGAAGTCGTCAATCAACTTTAAAGTGCTAGCC 159 consensus_9864#7 TG---------------------------------------------------------- 94 consensus_9864#2 TAATAACAG-GATCAA-ATTATATATTATGGGGCCGTCAACAAACTTTAAAGTGCTAGTC 167 consensus_9864#3 TAATAACAGCAATCAACATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATC 133 consensus_9864#5 TAATAACAG-AATCAA-ATTATATATTATGCGGCCGTCAACCAACTTTAAAGTGCTAATC 153 consensus_9864#0 ACAT-TATTTTTGTTGCAAA-TGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACA 200 consensus_9864#1 ACAT-TATTTTTGTTGCAAA-TGACCTTTCTAATGCCGTTTTCTCAGGCCTATGTGTACA 183 consensus_9864#6 ACATATATTTTTGTTGCAAAGTGATCTTCCTAATGCCGTTTTCTCAGGCCTATGTGTACA 226 consensus_9864#4 ACAT-TAGTTTTGTTACAAA-TGATCTATTTAGTATCGTTTTCACATGCATATACATTCC 217 consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 ACAT-TAGTTTTGTTGCAA-ATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACA 225 consensus_9864#3 ACAT-TAGTTTTGTTGCAACATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACA 192 consensus_9864#5 ACAT-TAGTTTTGTTGCAA-ATGATCTATTTAATATCGTTTTCACAGGCATATGTGTACA 211 consensus_9864#0 TCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGC-TAAA- 258 consensus_9864#1 TCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGC-TAAA- 241 consensus_9864#6 TCATTCCCAATGCAAAAAGCCAAGTTCAAGAAGGTAGCTGCTACGACGAATCGC-TAAA- 284 consensus_9864#4 TGATTAGTAACACAAAAAGTCAAGTTCAAGAAGATAGCTGCTACGACGAATCGC-TACA- 275 consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 TGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCAC-TACA- 283 consensus_9864#3 TGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCAC-TACA- 250 consensus_9864#5 TGGTTCCTAACGCAAAAAGCCAAGTTCAAGAAGATAGCTGCTACGACGAATCACGTACAG 271 consensus_9864#0 AATAA-ATGTTCCTG-TAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGC 316 consensus_9864#1 AATAA-ATGTTCCTG-TAAATGAAGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGC 299 consensus_9864#6 AATAA-ATGTTCCTG-TAAATGAGGTTCGACAGCGTACAGGAAAATGCGAATCCATGAGC 342 consensus_9864#4 AATAA-ATGTTCCTG-TAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATCAGG 333 consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 AATAA-ATGTTCCTG-TAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGC 341 consensus_9864#3 AATAA-ATGTTCCTG-TAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGC 308 consensus_9864#5 AATAAGATGTTCCTGGTAAATGAGGAACGACAGCGTCCCGGAAAATGTGAATCCATGCGC 331 consensus_9864#0 TGCAGTGACGATTATTCGCTTCATGTTGCTGG-ATGTGGCAAGTATTGCCGGTTTGGACC 375 consensus_9864#1 TGCAGTGATGATTATTCACTTCATGTTGCTGG-ATGTGGCA-GTATTGCGG--TTGGGCC 355 consensus_9864#6 TGCAGTGACGATTATTCGCTTCATGTTGCTGGGATGTGGCA-GTATTGCGG--TTGGACC 399 consensus_9864#4 TGCAGTGATGATTATTCACTTCATGGTATTGG-ATGTGGTTTTTTTGCGGTTGGGCCTGG 392 consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 TGCAGTGATGATTATTCACTTCATATTGCTGG-ATGTGGAG-TCATTGGGG--TAGGACC 397 consensus_9864#3 TGCAGTGATGATTATTCACTTCATGTTGCTGG-ATGTGGAG-TTATTGGGG--TTGGACC 364 consensus_9864#5 TGCAGTGATGATGATTCACTTCATGTTGCTGG-ATGTGGAG-TTATTGGGG--TTGGACC 387 consensus_9864#0 TGGCA-TGATAATAAACTTCCTACAGACTATTTCGAAAACCGTATTCCAGATTTGTTG-C 433 consensus_9864#1 TGGAA-TGATAATAA--CTCCTACAGACTATTC--AAAACCGTATCCTGA--TTGTTG-C 407 consensus_9864#6 TGGCA-TGATAATAA-CGTCCTACAGACTATTGC-GAAACCGTATCCAGA--TGGTTGAC 454 consensus_9864#4 CATGG-TGTTAACTAAGATTGACTATTCAAAACCGTTTCCAGATTGCTGCCCGAAAGCGA 451 consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 TGGAA-TGGTTTTAA--CTAAGACAGACTATTCT--AAACCGTATCCAGATT--GCTGTC 450 consensus_9864#3 TGGAA-TGGTTTTAA--CTAAGATAGACTATTCT--AAACCGTATCCAGATT--GCTGTC 417 consensus_9864#5 TGGAAATGGTTTTAA--CTAAAATAGACTATTCT--AAACCGTATCCAGGATTGGCTGTC 443 consensus_9864#0 CCGCACCCC--GGCATTGAGCTGCCACGCAACACATGTGGTTTAACAAACAAAACACAGA 491 consensus_9864#1 CCGCACCC---GGCATTGAGT------GCAGAAAATGTGGTTTAA-AAACAAAACACAGA 457 consensus_9864#6 CCGCGACCACGGCCATTGAGT----GCAGGAAAAGTGTGGTTTAAAAACANAAACACAG- 509 consensus_9864#4 TAAAACAGACTGAACAAGACTTGTTTTAAAAACAAAACAAACGCAACGCTGAAACGTGAC 511 consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 CCCAA--GTGAAAATT--ACC----GCAGAAGATT--CAAATTAAAATCAA-AACATAAT 499 consensus_9864#3 CCCAA--GTGAAAATG--AAC----GCAGAAGATT--CAAATTAAAATCAACAACATAAT 467 consensus_9864#5 CCCAAAGGTGAACACTGAAAC----GCAGAAGATTTCCAAGTTNNA--CGAGTCCGANAG 497 consensus_9864#0 AAAGCACGCAACTGCCATACTCAAAACGCTGT-CACGTACAGCTCTTACCCCGAGCTTAC 550 consensus_9864#1 AAA-CA---GAATACCATACTCAAAA--GTGT-CACGTATAGTTTTAGTACAGAG-TTAC 509 consensus_9864#6 ------------------------------------------------------------ consensus_9864#4 ATGATTTTGATAATTTGATATGAAATGATTCC-ATAATAATAAAAAAATAAAACGATTTA 570 consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 GCTAAAACGTGTCATGAATTTGATCATTTGAT-CAAGTTAAAAAATACTAATCAGCTCGC 558 consensus_9864#3 GCTAAAACGTGTCATGAATTTGATCATTTGATACAAGTGAAAGATTGCTAATCAGCCCGC 527 consensus_9864#5 CCGTTNACGTGGCGTCGAAACG-------------------------------------- 519 consensus_9864#0 GCGACACTCGACGAAACGCTAAATTCTTAGCTTATGACAGTTCACTTCACTCAAATTGGT 610 consensus_9864#1 GCGACACTAGA-GTTACGCTAA-TTCTTAGTTT-TGACAGTTCATTTA--TCAAATTGGT 564 consensus_9864#6 ------------------------------------------------------------ consensus_9864#4 ATTCAAGTA--------------------------------------------------- 579 consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 ATTTTATTCTCGGAACGACGCATAAACTAGAACAAAACAAATAATGCTGAATAAA----A 614 consensus_9864#3 ATTT-ATTCTCGAAACAACGCATAAACTA-AACAAAACAAATAATGCTGAATANACCACN 585 consensus_9864#5 ------------------------------------------------------------ consensus_9864#0 ACAATTTCCATCCTAACAAATTGTCAAACTCTCCACANNTANCACTTACACGCTCTCTTG 670 consensus_9864#1 ACAATTTAAATCTAAACAAA--GCCAATTTCAAAATAAATTGCAGTT----------TTA 612 consensus_9864#6 ------------------------------------------------------------ consensus_9864#4 ------------------------------------------------------------ consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 AAAAATCC---------------------------------------------------- 622 consensus_9864#3 CANAATCCAAAACATAAACANNACNCCANACACA-------------------------- 619 consensus_9864#5 ------------------------------------------------------------ consensus_9864#0 CTAAACTGTTTGCANAATCCGCCTAAAATACACAGAAATAACCGAA-TTTTCTACACGAA 729 consensus_9864#1 GCATAATGTTTGAAA---TCGCT--AAATACACAGAAATGACCGAAATTTTCTACACAAA 667 consensus_9864#6 ------------------------------------------------------------ consensus_9864#4 ------------------------------------------------------------ consensus_9864#7 ------------------------------------------------------------ consensus_9864#2 ------------------------------------------------------------ consensus_9864#3 ------------------------------------------------------------ consensus_9864#5 ------------------------------------------------------------ consensus_9864#0 TTGTNCTGACACATATGTACACNTAAA-------------- 756 consensus_9864#1 TTGTATGG---CATAAGTAACAATAAACATTACATTATTAC 705 consensus_9864#6 ----------------------------------------- consensus_9864#4 ----------------------------------------- consensus_9864#7 ----------------------------------------- consensus_9864#2 ----------------------------------------- consensus_9864#3 ----------------------------------------- consensus_9864#5 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||