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Anopheles gambiae
cluster # 9877 cluster # 9877       Sequences # 22       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9877#0 length = 712 sequences # 21  
consensus_9877#1 length = 616 sequences # 1  

consensusID : consensus_9877#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 712
fasta sequence
                              [CCGAGGGCCGGTTTTAGGTTGAAGTCACGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA-CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG-CTGGCCGGCGGTCTCGG-TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC-TCAAGAAGCAGTCCGTCGATG-AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC-GAGGATGGACGACCGGCAAGTGAGGTGGAGAG-CG--G-GC-GGTTTGAGAAGAGCGAACTTTAAAACCCCCGA-TTCTCGGTTCTGTTGTAAAGCATCTTAGG-CAATAAATACTGTGGATACTACAGCCTGTTTACGAGCGGAAAAAAAATTACAACAACAAGGCAGCATGTGCG]

[+] EMBL AL930605             [CCGAGGGTTAATATTAGG TGAAGTTACGTAAAA TCGCC TTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTTGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAAT                                                                                                                                                                                                                          ]
[+] EMBL BM586800             [       CCGGTTTTAGGTTGAAGTTACGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACGGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCACTTCAAGAAGCAGTCCGTCGATGAAAGGTTGGGAGTTCTTCCCCGAGGTGAAGCATCACGCCGTTAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAACGGAGGATGGACGACCGGCAAGTGAGGTGGAGAGCCG  G GCGGGTTTGAGAAGAGCGAACTTTAAAACCCCCGATTTCTCGGTTCTGTTGTAAAGCATCTTAGG CAATAAATACTGTGGAT                                                       ]
[+] EMBL BM637471             [       CCGGTTTTAGGTTGAAGTTACGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGA                                                                                                                                                  ]
[+] EMBL BM637286             [       CCGGTTTTAGGTTGAAGTTACGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACGGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCATCACGCCGTTAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGA TTCTCGGTTCTGTT                                                                                        ]
[+] EMBL BM609286             [                        ccgCGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACGGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCATCACGCCGTTAGCTTGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC G                                                                                                                                      ]
[+] EMBL BM632661             [                        ccgCGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CGatgtgc                                                                                                                                        ]
[+] EMBL BM585696             [                        ccgCGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACGGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCATCACGCCGTTAGCTCGATCA                                                                                                                                                                                                                            ]
[+] EMBL BM633901             [                         ccgGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG CTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AGGGTTGGGAGTTTTTCCCCGAGGTGAAGCATCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGG TTCTCGGTTCTGTTGTAAAGC                                                                                 ]
[+] EMBL BM623212             [                         ccgGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG CTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AGGGTTGGGAGTTTTTCCCCGAGGTGAAGCATCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGA                                                                                                                                                                                                 ]
[+] EMBL BM644311             [                         ccgGTAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG CTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AGGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGATTTCTCGGTTCTGTTGTAAAGCA                                                                                ]
[+] EMBL BM643369             [                           ccgAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACGGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCATCACGCCGTTAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGA TTCTCGGTTCTGTTGTAAAGCATCTTAGG CAATAAATACTGTGGATACTACAGCCTGTTTACGAGCGG                                 ]
[+] EMBL BM639945             [                           ccgAAAATTCGCCTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGC                                                                                                                                                                                                    ]
[+] EMBL BX616024             [                                            GCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTTGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAG                                                                                                                          ]
[+] EMBL BX616267             [                                              TCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTTGCGGCCGGCGGTGTGTACGTTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGA TTCTCGGTTCTGTTGTAAAGCATCTTAGG CAATAAATACTGTGGATACTACAGCCTGT                                           ]
[+] EMBL BM652427             [                                             ccgGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG CTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AGGGTTGGGAGTTTTTCCCCGAGGTGAAGCATCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGG TTCTCGGTTCTGTTGTAAAGCATCTT                                                                            ]
[+] EMBL BM645886             [                                               ccgGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG TTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CGATGTGC GATGTGAGACGAGTGAACTACAAAACCCCCGG TTCTCGGTTCTGTTGTAAAGCATCTTAGG CAATAAATACTGTGGATACTACAGCCTGTTTACGAGCGG                                 ]
[+] EMBL BM629311             [                                               ccgGGAAATCCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG CTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AGGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGA TTC                                                                                                   ]
[+] EMBL BM655419             [                                                      ccgCCTAAACATGAGCTTAAAGGCAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG TTGGCCGGCGGTCTCGG CTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BX466722             [                                                                        AAAGGCAAATTACCTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCGCCTGGCCGGCGGTCTCGGCTTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGCCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTTGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AAGGTTGGGAGTTCTTCCCCGAGGTGAAGCACCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGA TTCTCGGTTCTGTTGTAAAGCATCTTAGGCCAATAAATACTGTGGATACTACAGCCTGTTTACGAGCGGAAAAAAAATTACAACAACAAGGCAGCATGTGCG]
[+] EMBL BM586528             [                                                                           ccgAAATTA CTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG CTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AGGGTTGGGAGTTTTTCCCCGAGGTGAAGCATCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGG TTCTCGGTTCTGTTGTAAAGCATCTTAGG CAAT                                                                    ]
[+] EMBL BM642465             [                                                                                                                             ccgGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGG CTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACCGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCAC TCAAGAAGCAGTCCGTCGATG AGGGTTGGGAGTTTTTCCCCGAGGTGAAGCATCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGAAC GAGGATGGACGACCGGCAAGTGAGGTGGAGAG CG  G GC GGTTTGAGAAGAGCGAACTTTAAAACCCCCGG TTCTCGGTTCTGTTGTAAAGCATCTTAGG C                                                                       ]


>consensus_9877#0 CCGAGGGCCGGTTTTAGGTTGAAGTCACGTAAAATTCGCCTTTTGCTCGAGGAAATCCCT AAACATGAGCTTAAAGGCAAATTACTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAA GATGATCGCCACCAACAAGTACGCGCTGGCCGGCGGTCTCGGTTGGTCCACGGTCGAGGT GATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTAC CGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCT GCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTA CGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGC GGGCGCACTCAAGAAGCAGTCCGTCGATGAAGGTTGGGAGTTCTTCCCCGAGGTGAAGCA CCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGA ACGAGGATGGACGACCGGCAAGTGAGGTGGAGAGCGGGCGGTTTGAGAAGAGCGAACTTT AAAACCCCCGATTCTCGGTTCTGTTGTAAAGCATCTTAGGCAATAAATACTGTGGATACT ACAGCCTGTTTACGAGCGGAAAAAAAATTACAACAACAAGGCAGCATGTGCG



consensusID : consensus_9877#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 616
fasta sequence
                              [CCGCGGACGCGTGGGTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTACTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCGCTGGCCGGCGGTCTCGGTTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACGGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCACTCAAGAAGCAGTCCGTCGATGAAGGTTGGGAGTTCTTCCCCGAGGTGAAGCATCACGCCGTTAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGCAACGATGGATGGACGACCGGCAAGTGAGGTGGAGAAGCGGGCGGTTTGAGAAGAGCGAACTTTAAAACCCCCGATTTCTCGGTTCTGTTGTAAAGCATCTT]

[+] EMBL BM626378             [CCGCGGACGCGTGGGTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTACTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCGCTGGCCGGCGGTCTCGGTTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTACGGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCACTCAAGAAGCAGTCCGTCGATGAAGGTTGGGAGTTCTTCCCCGAGGTGAAGCATCACGCCGTTAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGCAACGATGGATGGACGACCGGCAAGTGAGGTGGAGAAGCGGGCGGTTTGAGAAGAGCGAACTTTAAAACCCCCGATTTCTCGGTTCTGTTGTAAAGCATCTT]


>consensus_9877#1 CCGCGGACGCGTGGGTTTTGCTCGAGGAAATCCCTAAACATGAGCTTAAAGGCAAATTAC TACGACAAGCCGGAGGGCGACGACCTCTTCGGCAAGATGATCGCCACCAACAAGTACGCG CTGGCCGGCGGTCTCGGTTGGTCCACGGTCGAGGTGATGATGGTGTCGAAGCCGAAGGGC TACCTGCCCACCATTGCCCGGTACGTGTACTTTACGGGTCCGTTCGTCGGAATGGCCTCG GCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCTGCGCGGTCGGGACGATGCGTGGAAC TATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTACGGTGCCTGGAAGCGAAACGTCGTG AGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGCGGGCGCACTCAAGAAGCAGTCCGTC GATGAAGGTTGGGAGTTCTTCCCCGAGGTGAAGCATCACGCCGTTAGCTCGATCAATCCG AACCGGTACGACTTCACGCTGACGCAGGAACGCGCAACGATGGATGGACGACCGGCAAGT GAGGTGGAGAAGCGGGCGGTTTGAGAAGAGCGAACTTTAAAACCCCCGATTTCTCGGTTC TGTTGTAAAGCATCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9877#0      CCGAGGGCCGGTTTTAGGTTGAAGTCACGTAAAATTCGCCTTTTGCTCGAGGAAATCCCT 60
consensus_9877#1      ------------------------CCGCG-GACGCGTGGGTTTTGCTCGAGGAAATCCCT 35
                                               * **  *     *  ********************

consensus_9877#0      AAACATGAGCTTAAAGGCAAATTACTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAA 120
consensus_9877#1      AAACATGAGCTTAAAGGCAAATTACTACGACAAGCCGGAGGGCGACGACCTCTTCGGCAA 95
                      ************************************************************

consensus_9877#0      GATGATCGCCACCAACAAGTACGCGCTGGCCGGCGGTCTCGGTTGGTCCACGGTCGAGGT 180
consensus_9877#1      GATGATCGCCACCAACAAGTACGCGCTGGCCGGCGGTCTCGGTTGGTCCACGGTCGAGGT 155
                      ************************************************************

consensus_9877#0      GATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTAC 240
consensus_9877#1      GATGATGGTGTCGAAGCCGAAGGGCTACCTGCCCACCATTGCCCGGTACGTGTACTTTAC 215
                      ************************************************************

consensus_9877#0      CGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCT 300
consensus_9877#1      GGGTCCGTTCGTCGGAATGGCCTCGGCCTTTACCGTCGGTGCGTACGCTGCCAACAAGCT 275
                       ***********************************************************

consensus_9877#0      GCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTA 360
consensus_9877#1      GCGCGGTCGGGACGATGCGTGGAACTATGTGGCCGGTGCGTTCGCGGCCGGCGGTGTGTA 335
                      ************************************************************

consensus_9877#0      CGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGC 420
consensus_9877#1      CGGTGCCTGGAAGCGAAACGTCGTGAGCGGACTGGTGGCCGGCCTGATCTTCAGCGTGGC 395
                      ************************************************************

consensus_9877#0      GGGCGCACTCAAGAAGCAGTCCGTCGATGAAGGTTGGGAGTTCTTCCCCGAGGTGAAGCA 480
consensus_9877#1      GGGCGCACTCAAGAAGCAGTCCGTCGATGAAGGTTGGGAGTTCTTCCCCGAGGTGAAGCA 455
                      ************************************************************

consensus_9877#0      CCACGCCGTCAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCG- 539
consensus_9877#1      TCACGCCGTTAGCTCGATCAATCCGAACCGGTACGACTTCACGCTGACGCAGGAACGCGC 515
                       ******** ************************************************* 

consensus_9877#0      AACGA-GGATGGACGACCGGCAAGTGAGGTGGAGA-GCGGGCGGTTTGAGAAGAGCGAAC 597
consensus_9877#1      AACGATGGATGGACGACCGGCAAGTGAGGTGGAGAAGCGGGCGGTTTGAGAAGAGCGAAC 575
                      ***** ***************************** ************************

consensus_9877#0      TTTAAAACCCCCGATT-CTCGGTTCTGTTGTAAAGCATCTTAGGCAATAAATACTGTGGA 656
consensus_9877#1      TTTAAAACCCCCGATTTCTCGGTTCTGTTGTAAAGCATCTT------------------- 616
                      **************** ************************                   

consensus_9877#0      TACTACAGCCTGTTTACGAGCGGAAAAAAAATTACAACAACAAGGCAGCATGTGCG 712
consensus_9877#1      --------------------------------------------------------
                                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)