These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9880#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1417 fasta sequence [CGCGCGCGCGTAAACAAAAGTCAGAGCAAAATGTTCTGTTTTGTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG-GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT-GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA-T-AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG-CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT-CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA-CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT-G-GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT-GCC-GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG-ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT-GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCACAAAAGCATC] [+] EMBL BX621346 [CGCGCGCGCGTAAACAAAAGTCAGAGCAAAATGTTCTGTTTTGTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTA ] [+] EMBL BM635083 [ ccgCAAAAGTCAGAGCAAAATGTTCTGTTTTGTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGTGGGAGAATCTGTTCTGCTTCATCT ] [+] EMBL BX621535 [ AAATGTTCTGTTTTGTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTA ] [+] EMBL CNS08FY6 [ GTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGA CTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAAAAA TGAACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGTG G GCCGACT ] [+] EMBL CNS08WDW [ ATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAAGTGG GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACC ] [+] EMBL CNS08G70 [ TCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGTG G GCCGACTGCATCTGTCTTATGTCGCTGG ] [+] EMBL CNS08OWX [ CGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGccc ] [+] EMBL CNS08MWD [ AAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGTG G GCCGACTGCATCTGTC ] [+] EMBL CNS08P3B [ gAATCAACGTTTGCGTGGTAA AGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACCATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCGCCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAAAAAAAAATGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGCGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGTG G GCCGACTGCATCTGTCTTATGTCGCTGGGGCA CTGCA ] [+] EMBL CNS09LPS [ ACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT GCGCCGACTGCATCTGTCTTATGTCGCTGGGGCA CTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTA ] [+] EMBL CNS09GFL [ TTTCTGAGAGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAG ACAATT AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGgc ] [+] EMBL BX623412 [ TGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCT ] [+] EMBL BX624065 [ TTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGANACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCTGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCNCGAGCTCGGCTTCGGCTACCGGGC ] [-] EMBL CNS08WDX [ GCTACTACGAACAGCT TGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTTTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CA CTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGAAACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCAC ] [-] EMBL CNS08G71 [ aacCAGCT TGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAG TGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCATAAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCAACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCACA ] [-] EMBL CNS08MWE [ ctTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGGCCAG TGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCA ] [-] EMBL CNS08FY7 [ TAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGGGCTCGCTCGCTGACCCCACAGTAGAGGGGACA CTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCCACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGAAACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGGAACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCTCGCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCACAAAAGC ] [-] EMBL CNS09LPT [ GGCTACCGGGCCAAATACATTCAACGGTGCGGCGGAGAAAATTCTTCAGCTCGGCGTTCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGGGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCCACTGCTTCTTTCTTTTGTCGCTGGGGCACCTGCAGGCCATACCGGTCGAAACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTCCCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGT ] [-] EMBL CNS08OWY [ aaaGGGAAAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTG TTCCCCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAGAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAAT CATCAAATGCACAAAAGCATC] [-] EMBL CNS08P3C [ ttttttttAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGT ] [-] EMBL CNS09GFM [ GAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCCACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGAAACGCACGTGTTTCAGCTAGCGAAACATTACCTCGCCGGGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGta ] consensusID : consensus_9880#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence [AGATCCCCCGAGGTTTGTATCGAAATCAACGTTTGCGTGGTACAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTTGGACCCAGCATGAAAACCGAAATTCATTTGGGCGTTGGTTTGGCCAAACATTCGTGTGGGGGTTGTTTGGCGACAAAACGGGAGGCGCGAAGCTAACAGTTACCCGTTATCGTCGGTGGAGCAAGCCGTACCCGAACAAAGCGAACAGGGACGGTAAACAAAAATACACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACTTGCCGAGGTGCGCTTGAAAGGTTGGCCGAACCGTCCGAGTATTGCCACCGGGGGAGAGTTGTTGTATCCGGCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCTAGACGTAGACCTCGAGCAGCAGTACCAGCATGGATCCGGTGCCACGAGCACTTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCAGCTGGATCAGGATCCCGGTGGAGAATCTGTTCTGNTTCATTCTGTTCGNCAGAACATAACATCGCACGCATC] [+] EMBL AL694488 [AGATCCCCCGAGGTTTGTATCGAAATCAACGTTTGCGTGGTACAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTTGGACCCAGCATGAAAACCGAAATTCATTTGGGCGTTGGTTTGGCCAAACATTCGTGTGGGGGTTGTTTGGCGACAAAACGGGAGGCGCGAAGCTAACAGTTACCCGTTATCGTCGGTGGAGCAAGCCGTACCCGAACAAAGCGAACAGGGACGGTAAACAAAAATACACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACTTGCCGAGGTGCGCTTGAAAGGTTGGCCGAACCGTCCGAGTATTGCCACCGGGGGAGAGTTGTTGTATCCGGCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCTAGACGTAGACCTCGAGCAGCAGTACCAGCATGGATCCGGTGCCACGAGCACTTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCAGCTGGATCAGGATCCCGGTGGAGAATCTGTTCTGNTTCATTCTGTTCGNCAGAACATAACATCGCACGCATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9880#0 CGCGCGCGCGTAAACAAAAGTCAGAGCAAAATGTTCTGT--TTTGTATCGAAATCAACGT 58 consensus_9880#1 ----------------------------AGATCCCCCGAGGTTTGTATCGAAATCAACGT 32 * ** * * ******************* consensus_9880#0 TTGCGTGGTAACAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCAC 118 consensus_9880#1 TTGCGTGGTA-CAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCAC 91 ********** ************************************************* consensus_9880#0 TATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACT 178 consensus_9880#1 TATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACT 151 ************************************************************ consensus_9880#0 AGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGA--CCAGCATGAA 236 consensus_9880#1 AGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTTGGACCCAGCATGAA 211 ********************************************* * ********** consensus_9880#0 ACC--GAATTCATT--GGCGT--GTTTGCC--AACAT-CGTGTGGGTGTTG-----CGAC 282 consensus_9880#1 AACCGAAATTCATTTGGGCGTTGGTTTGGCCAAACATTCGTGTGGGGGTTGTTTGGCGAC 271 * * ******** ***** ***** * ***** ******** **** **** consensus_9880#0 AAA-CGGAGCGCG---AGCTA-CAGT-ACCG--TATCGTCGGTG-AGCA-GCCGTACCCG 332 consensus_9880#1 AAAACGGGAGGCGCGAAGCTAACAGTTACCCGTTATCGTCGGTGGAGCAAGCCGTACCCG 331 *** *** *** ***** **** *** *********** **** ********** consensus_9880#0 AACAAAGCGAACAGGGACGT--AACAAAAT--CACCCATCCCCGAGCCGCAGCAGCCCCC 388 consensus_9880#1 AACAAAGCGAACAGGGACGGTAAACAAAAATACACCCATCCCCGAGCCGCAGCAGCCCCC 391 ******************* ******* **************************** consensus_9880#0 GGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGG--TGGCCGAACCGTCCGAGTAT 446 consensus_9880#1 GGGCAATGTGCGAAAC-TTGCCGAGGTGCGCTTGAAAGGTTGGCCGAACCGTCCGAGTAT 450 **************** ******************* * ******************** consensus_9880#0 -GCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTA 505 consensus_9880#1 TGCCACCGGGGGAGAGTTGTTGTATCCGGC-AGCTACTACGAACAGCTGCTGCGCATCTA 509 ***************************** ***************************** consensus_9880#0 CTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCA 565 consensus_9880#1 CTTCCGC-TAGACGTAGACCTCGAGCAGCAGTACCAGCA-TGGATCCGGTGCCACGAGCA 567 ******* ******************************* ******************** consensus_9880#0 CTTT-GCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCC-GGTG 623 consensus_9880#1 CTTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGC-AGCTGGATCAGGATCCCGGTG 626 **** ********************************* **************** **** consensus_9880#0 GAGAATCTGTTCTGCTTCAT-CTGTTCGCAGAACAATAACATCGCACGCATCTCGGACAT 682 consensus_9880#1 GAGAATCTGTTCTGNTTCATTCTGTTCGNCAGAACATAACATCGCACGCATC-------- 678 ************** ***** ******* * ***************** consensus_9880#0 GGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTA 742 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 CTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGGCAGCTGCGCGA 802 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 GCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGTCGGCGGAGAAAATTCTTCAGCT 862 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 CGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCACAAGGA 922 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 GCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGTGGCCGACTGCATCTGTCTTATGTCGCT 982 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 GGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT 1042 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 GCCGGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGGACAA 1102 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 GTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGA 1162 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 TCTGCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCT 1222 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 GAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGAC 1282 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 ACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACG 1342 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 TTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAA 1402 consensus_9880#1 ------------------------------------------------------------ consensus_9880#0 ATGCACAAAAGCATC 1417 consensus_9880#1 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||