cluster # 9880

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Anopheles gambiae
cluster # 9880 cluster # 9880 Sequences # 22 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9880#0 length = 1417 sequences # 21

consensus_9880#1 length = 678 sequences # 1

consensusID : consensus_9880#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 1417
fasta sequence

                              [CGCGCGCGCGTAAACAAAAGTCAGAGCAAAATGTTCTGTTTTGTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG-GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT-GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA-T-AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG-CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT-CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA-CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT-G-GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT-GCC-GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG-ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT-GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCACAAAAGCATC]

[+] EMBL BX621346             [CGCGCGCGCGTAAACAAAAGTCAGAGCAAAATGTTCTGTTTTGTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM635083             [           ccgCAAAAGTCAGAGCAAAATGTTCTGTTTTGTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGTGGGAGAATCTGTTCTGCTTCATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX621535             [                            AAATGTTCTGTTTTGTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08FY6             [                                          GTATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGA CTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAAAAA TGAACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGTG G GCCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08WDW             [                                            ATCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAAGTGG GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACC                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS08G70             [                                             TCGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGTG G GCCGACTGCATCTGTCTTATGTCGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08OWX             [                                              CGAAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGccc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08MWD             [                                                AAATCAACGTTTGCGTGGTAACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGTG G GCCGACTGCATCTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS08P3B             [                                                gAATCAACGTTTGCGTGGTAA AGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACCATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCGCCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAAAAAAAAATGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGCGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGTG G GCCGACTGCATCTGTCTTATGTCGCTGGGGCA CTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09LPS             [                                                                    ACAGTTTCTGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT GCGCCGACTGCATCTGTCTTATGTCGCTGGGGCA CTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTA                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09GFL             [                                                                        TTTCTGAGAGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAG ACAATT AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCGCGAGCTCGGgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX623412             [                                                                            TGAG GATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCGAATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX624065             [                                                                                                                                                                                                                                                                TTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTACAGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAATCACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGANACCTTGCCGAGGTGCGCTTGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCTGCCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAGCTGCNCGAGCTCGGCTTCGGCTACCGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08WDX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCTACTACGAACAGCT  TGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTTTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CA CTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGAAACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCAC         ]
[-] EMBL CNS08G71             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aacCAGCT  TGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGG CAG TGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCATAAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCAACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCACA        ]
[-] EMBL CNS08MWE             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ctTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGGCCAG TGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCA          ]
[-] EMBL CNS08FY7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCCGGT GGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAA T AACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGGGCTCGCTCGCTGACCCCACAGTAGAGGGGACA CTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCCACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGAAACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGGAACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCTCGCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAAATGCACAAAAGC   ]
[-] EMBL CNS09LPT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCTACCGGGCCAAATACATTCAACGGTGCGGCGGAGAAAATTCTTCAGCTCGGCGTTCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGGGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCCACTGCTTCTTTCTTTTGTCGCTGGGGCACCTGCAGGCCATACCGGTCGAAACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTCCCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGT                                                                ]
[-] EMBL CNS08OWY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aaaGGGAAAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTG TTCCCCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAGAGAATGGGCAAGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAAT CATCAAATGCACAAAAGCATC]
[-] EMBL CNS08P3C             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ttttttttAAATACATTCAACGGT CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCGACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT GCC GGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGT                                                                                                                                                                                                                                         ]
[-] EMBL CNS09GFM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCA CAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGT G GCCCACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGAAACGCACGTGTTTCAGCTAGCGAAACATTACCTCGCCGGGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGG ACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGATCT GCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGta                                                                                                                                                      ]




>consensus_9880#0
CGCGCGCGCGTAAACAAAAGTCAGAGCAAAATGTTCTGTTTTGTATCGAAATCAACGTTT
GCGTGGTAACAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTA
TCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAG
GAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGACCAGCATGAAACCG
AATTCATTGGCGTGTTTGCCAACATCGTGTGGGTGTTGCGACAAACGGAGCGCGAGCTAC
AGTACCGTATCGTCGGTGAGCAGCCGTACCCGAACAAAGCGAACAGGGACGTAACAAAAT
CACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACCTTGCCGAGGTGCGCT
TGAAGGTGGCCGAACCGTCCGAGTATGCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCT
ACTACGAACAGCTGCTGCGCATCTACTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACC
AGCAATGGATCCGGTGCCACGAGCACTTTGCCAACAGTGCGACCAAATTCTATGCCGTCC
GCCAGCTGGATCAGGATCCGGTGGAGAATCTGTTCTGCTTCATCTGTTCGCAGAACAATA
ACATCGCACGCATCTCGGACATGGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCT
GCGAACACGAAGGTACCTGCTACTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCA
CAGTAGAGGGGCAGCTGCGCGAGCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGT
CGGCGGAGAAAATTCTTCAGCTCGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGG
ATTACAAAGCGGCTCACAAGGAGCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGTGGCCG
ACTGCATCTGTCTTATGTCGCTGGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGT
TTCAGCTAGCGAAACATTACCTGCCGGCGCTGAACATATCGAAGAACGTGACCGATCGGC
AGTACGTCACGGTGGCGGACAAGTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCC
AGACGGTGCTGTTCTGTTCCGATCTGCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGG
AGCGTGAGGATTCTTCCAAGCTGAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCA
AGATGATACGTTTAAAAATGACACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCT
TCCATACAAAGGTAAACTAACGTTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTT
TTGTTGTAAAAAAATGCATCAAATGCACAAAAGCATC

consensusID : consensus_9880#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence

                              [AGATCCCCCGAGGTTTGTATCGAAATCAACGTTTGCGTGGTACAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTTGGACCCAGCATGAAAACCGAAATTCATTTGGGCGTTGGTTTGGCCAAACATTCGTGTGGGGGTTGTTTGGCGACAAAACGGGAGGCGCGAAGCTAACAGTTACCCGTTATCGTCGGTGGAGCAAGCCGTACCCGAACAAAGCGAACAGGGACGGTAAACAAAAATACACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACTTGCCGAGGTGCGCTTGAAAGGTTGGCCGAACCGTCCGAGTATTGCCACCGGGGGAGAGTTGTTGTATCCGGCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCTAGACGTAGACCTCGAGCAGCAGTACCAGCATGGATCCGGTGCCACGAGCACTTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCAGCTGGATCAGGATCCCGGTGGAGAATCTGTTCTGNTTCATTCTGTTCGNCAGAACATAACATCGCACGCATC]

[+] EMBL AL694488             [AGATCCCCCGAGGTTTGTATCGAAATCAACGTTTGCGTGGTACAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTTGGACCCAGCATGAAAACCGAAATTCATTTGGGCGTTGGTTTGGCCAAACATTCGTGTGGGGGTTGTTTGGCGACAAAACGGGAGGCGCGAAGCTAACAGTTACCCGTTATCGTCGGTGGAGCAAGCCGTACCCGAACAAAGCGAACAGGGACGGTAAACAAAAATACACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACTTGCCGAGGTGCGCTTGAAAGGTTGGCCGAACCGTCCGAGTATTGCCACCGGGGGAGAGTTGTTGTATCCGGCAGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCTAGACGTAGACCTCGAGCAGCAGTACCAGCATGGATCCGGTGCCACGAGCACTTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGCAGCTGGATCAGGATCCCGGTGGAGAATCTGTTCTGNTTCATTCTGTTCGNCAGAACATAACATCGCACGCATC]




>consensus_9880#1
AGATCCCCCGAGGTTTGTATCGAAATCAACGTTTGCGTGGTACAGTTTCTGAGGATAGCA
CATAACCCTCTGGCAAGATAATGGCCGCCACTATCAAGTGGCGATCGTTACTTTGCGATT
ACAATCAACTGCAGCTAAAGGCCACCCTACTAGGAGGACAGAGCTTCCGCTGGAAAAATT
ATAAACCTACCGCATTTGGACCCAGCATGAAAACCGAAATTCATTTGGGCGTTGGTTTGG
CCAAACATTCGTGTGGGGGTTGTTTGGCGACAAAACGGGAGGCGCGAAGCTAACAGTTAC
CCGTTATCGTCGGTGGAGCAAGCCGTACCCGAACAAAGCGAACAGGGACGGTAAACAAAA
ATACACCCATCCCCGAGCCGCAGCAGCCCCCGGGCAATGTGCGAAACTTGCCGAGGTGCG
CTTGAAAGGTTGGCCGAACCGTCCGAGTATTGCCACCGGGGGAGAGTTGTTGTATCCGGC
AGCTACTACGAACAGCTGCTGCGCATCTACTTCCGCTAGACGTAGACCTCGAGCAGCAGT
ACCAGCATGGATCCGGTGCCACGAGCACTTTTGCCAACAGTGCGACCAAATTCTATGCCG
TCCGCAGCTGGATCAGGATCCCGGTGGAGAATCTGTTCTGNTTCATTCTGTTCGNCAGAA
CATAACATCGCACGCATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9880#0      CGCGCGCGCGTAAACAAAAGTCAGAGCAAAATGTTCTGT--TTTGTATCGAAATCAACGT 58
consensus_9880#1      ----------------------------AGATCCCCCGAGGTTTGTATCGAAATCAACGT 32
                                                  * **   * *   *******************

consensus_9880#0      TTGCGTGGTAACAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCAC 118
consensus_9880#1      TTGCGTGGTA-CAGTTTCTGAGGATAGCACATAACCCTCTGGCAAGATAATGGCCGCCAC 91
                      ********** *************************************************

consensus_9880#0      TATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACT 178
consensus_9880#1      TATCAAGTGGCGATCGTTACTTTGCGATTACAATCAACTGCAGCTAAAGGCCACCCTACT 151
                      ************************************************************

consensus_9880#0      AGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTGGA--CCAGCATGAA 236
consensus_9880#1      AGGAGGACAGAGCTTCCGCTGGAAAAATTATAAACCTACCGCATTTGGACCCAGCATGAA 211
                      ********************************************* *   **********

consensus_9880#0      ACC--GAATTCATT--GGCGT--GTTTGCC--AACAT-CGTGTGGGTGTTG-----CGAC 282
consensus_9880#1      AACCGAAATTCATTTGGGCGTTGGTTTGGCCAAACATTCGTGTGGGGGTTGTTTGGCGAC 271
                      * *   ********  *****  ***** *  ***** ******** ****     ****

consensus_9880#0      AAA-CGGAGCGCG---AGCTA-CAGT-ACCG--TATCGTCGGTG-AGCA-GCCGTACCCG 332
consensus_9880#1      AAAACGGGAGGCGCGAAGCTAACAGTTACCCGTTATCGTCGGTGGAGCAAGCCGTACCCG 331
                      *** ***   ***   ***** **** ***   *********** **** **********

consensus_9880#0      AACAAAGCGAACAGGGACGT--AACAAAAT--CACCCATCCCCGAGCCGCAGCAGCCCCC 388
consensus_9880#1      AACAAAGCGAACAGGGACGGTAAACAAAAATACACCCATCCCCGAGCCGCAGCAGCCCCC 391
                      *******************   *******   ****************************

consensus_9880#0      GGGCAATGTGCGAAACCTTGCCGAGGTGCGCTTGAAGG--TGGCCGAACCGTCCGAGTAT 446
consensus_9880#1      GGGCAATGTGCGAAAC-TTGCCGAGGTGCGCTTGAAAGGTTGGCCGAACCGTCCGAGTAT 450
                      **************** ******************* *  ********************

consensus_9880#0      -GCCACCGGGGGAGAGTTGTTGTATCCGGCCAGCTACTACGAACAGCTGCTGCGCATCTA 505
consensus_9880#1      TGCCACCGGGGGAGAGTTGTTGTATCCGGC-AGCTACTACGAACAGCTGCTGCGCATCTA 509
                       ***************************** *****************************

consensus_9880#0      CTTCCGCCTAGACGTAGACCTCGAGCAGCAGTACCAGCAATGGATCCGGTGCCACGAGCA 565
consensus_9880#1      CTTCCGC-TAGACGTAGACCTCGAGCAGCAGTACCAGCA-TGGATCCGGTGCCACGAGCA 567
                      ******* ******************************* ********************

consensus_9880#0      CTTT-GCCAACAGTGCGACCAAATTCTATGCCGTCCGCCAGCTGGATCAGGATCC-GGTG 623
consensus_9880#1      CTTTTGCCAACAGTGCGACCAAATTCTATGCCGTCCGC-AGCTGGATCAGGATCCCGGTG 626
                      **** ********************************* **************** ****

consensus_9880#0      GAGAATCTGTTCTGCTTCAT-CTGTTCGCAGAACAATAACATCGCACGCATCTCGGACAT 682
consensus_9880#1      GAGAATCTGTTCTGNTTCATTCTGTTCGNCAGAACATAACATCGCACGCATC-------- 678
                      ************** ***** *******    *  *****************        

consensus_9880#0      GGTGGAAAAGCTTTGCCGCAACTATGGGGAGAAAATCTGCGAACACGAAGGTACCTGCTA 742
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      CTACAATTTCCCATCGGTGAGCTCGCTCGCTGACCCCACAGTAGAGGGGCAGCTGCGCGA 802
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      GCTCGGCTTCGGCTACCGGGCCAAATACATTCAACGGTCGGCGGAGAAAATTCTTCAGCT 862
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      CGGCGATCTGGAATGGTTCCGGCAGCTCTGCCAGCTGGATTACAAAGCGGCTCACAAGGA 922
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      GCTGGTGTCGCTGCCCGGCATCGGGCCGAAGGTGGCCGACTGCATCTGTCTTATGTCGCT 982
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      GGGGCACCTGCAGGCCATACCGGTCGATACGCACGTGTTTCAGCTAGCGAAACATTACCT 1042
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      GCCGGCGCTGAACATATCGAAGAACGTGACCGATCGGCAGTACGTCACGGTGGCGGACAA 1102
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      GTTTCGCGAGGTTTATGGGCCTTTCGCGGGCTGGGCCCAGACGGTGCTGTTCTGTTCCGA 1162
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      TCTGCGCCAGTTTCGCGAACGTACCAAGCGTAACGGGGAGCGTGAGGATTCTTCCAAGCT 1222
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      GAAGAAAAAACGCAAAAAGAAAGGCTAAAGAATGGGCAAGATGATACGTTTAAAAATGAC 1282
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      ACTTGTTTTATTGAATACTTAGTACTATTTAAAACTCTTCCATACAAAGGTAAACTAACG 1342
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      TTTAGGAACGTACGATTTTCTAAAACATTATTTGTCTTTTGTTGTAAAAAAATGCATCAA 1402
consensus_9880#1      ------------------------------------------------------------
                                                                                  

consensus_9880#0      ATGCACAAAAGCATC 1417
consensus_9880#1      ---------------