cluster # 9927

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Anopheles gambiae
cluster # 9927 cluster # 9927 Sequences # 23 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9927#0 length = 1172 sequences # 14

consensus_9927#1 length = 672 sequences # 8
consensus_9927#2 length = 470 sequences # 1

consensusID : consensus_9927#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1172
fasta sequence

                              [AGTATCATACCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG-TTTTTTATAATTCACCAGTGAAACTTAAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATAGCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTCTGCTCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCATCCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCGGACGGACGGACCATGATCGCCTAATGATGGTCGGTTCGGACTGTACAAGCACTTTTGTAAAATAACTTTATGCCCATCCCGCTTGACCAGCCGCCTCTGGCTGGGCCAGTATACTCTCTTGTTTATGTATCCATTCGTTTGCTCACGTTGCAGTTGAATATTGTATTACGTACCGATTTTAATAAATCACGCAACAGCCTTCACAAAACAGCC]

[+] EMBL CNS08WZV             [AGTATCATACCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCATCACAGCGTTCCACAGTGCAGGATAACAGTTCGCAAGGAGCAG TTTTTTATAATTCACCAGTGAAACTTAAACTATACAGAATAGAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAATGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAGTAGACGCTTCCAGTGAGGA  CGGTTGAGGGGACCGGAGGGTGACAAAGTGCGCGAGATCTGCGGGGTCTGTGATATTTATTAGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09KK4             [         CCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCATCACAGCGTTCCACAGTGCAGGATAACAGTTCGCAAGGAGCAG TTTTTTATAATTCACCAGTG AACTTAAACTATACAGAATAGAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAATGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAGTAGACGCTTCCAGTGAGGA  CGGTTGAGGGGACCGGA GGTGACAAAGTGCGCGAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATAGCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTCTGCTCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCATCCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCGGACGGACGGACCATGATCGCCTAATGATGGTCGGTT                                                                                                                                                                                 ]
[+] EMBL BM651669             [           ccgGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM612977             [               CCGAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCATACAGA  ATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAAGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM630686             [                    ccgCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAAGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM622043             [                       CCGGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX606689             [                        CAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGTTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGTATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM655527             [                           ccgACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAAGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCAGCTACCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM650510             [                              ccgGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM636536             [                                            ccgGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM627094             [                                                      ccgGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG TTTTTT TTATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGAATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM640471             [                                                                                                                                                                                                               CCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACAAGACGAGCAACGGCATCCGGGCCGATCACCGCGGCTTCCTGAAGAACCCGGTCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCTTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX609495             [                                                                                                                                                                                                                                                                                                                                                         GCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGTTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCAAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGACCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTAAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCATCTACCCATTTCCATACTGATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATAGCCATTAGCCAGCC                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS09KK5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATATCCCAGCCGCCCCACGGGTCAACCCGCGCTATCCCGGCCAGTACCAGTAGACGCTTCCAGTGAGGA  CGGTTGAGGGGACCGGAGGGTGACAAAGTGCGCGAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTA CCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATAGCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTCTG TCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCATCCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCGGACGGACGGACCATGATCGCCTAATGATGGTCGGTTCGGACTGTACAAGCACTTTTGTAAAATAACTTTATGCCCATCCCGCTTGACCAGCCGCCTCTGGCTGGGCCAGTATACTCTCTTGTTTATGTATCCATTCGTTTGCTCACGTTGCAGTTGAATATTGTATTACGTACCGATTTTAATAAATCACGCAACAGCCTTCACAAAACAGCC]




>consensus_9927#0
AGTATCATACCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTT
CCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTATAATTCACCAGTGAAACTTA
AACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGC
TACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGG
TCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTA
CGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAA
CCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGA
CGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGC
GCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCT
CCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGT
CTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGA
AACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCC
CATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAATA
GCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTCT
GCTCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCAT
CCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCGG
ACGGACGGACCATGATCGCCTAATGATGGTCGGTTCGGACTGTACAAGCACTTTTGTAAA
ATAACTTTATGCCCATCCCGCTTGACCAGCCGCCTCTGGCTGGGCCAGTATACTCTCTTG
TTTATGTATCCATTCGTTTGCTCACGTTGCAGTTGAATATTGTATTACGTACCGATTTTA
ATAAATCACGCAACAGCCTTCACAAAACAGCC

consensusID : consensus_9927#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 672
fasta sequence

                              [CCGCGGACGCGTGG------GTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG--TTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC-GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA-CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCC]

[+] EMBL BM633940             [CCGCGGACGCGTGG      GTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG  TTTTTTT T ATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCC]
[+] EMBL BM627076             [CCGCGGACGCGTGGGATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG  TTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGCACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTC                             ]
[+] EMBL BM641751             [CCGCGGACGCGTGG      GTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG  TTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGCACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTAC                                  ]
[+] EMBL BM597025             [CCGCGGACGCGTGGGCCA  GTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG  TTTTTTT T ATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTGGTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCG                                                                                                                                                                             ]
[+] EMBL BX617736             [                                GCAGCATCAGCACCACAGCGTTCCACAGTGCAGGATAATAGTTTGCAAGGAGCAGTTTTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCTGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACACTCCCAGTAAGGACCGAGTTGAGGGGACCCGGA GGTGACAAAGCGCGCAAGATCTGCGGGGTCTGT                                                                               ]
[+] EMBL BM654523             [                                              ccgGCGTTCCACAGTGCAGGATAACAGTTTGCAAGGAGCAG  TTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTCTGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGCACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGA CCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTAAAACGCCGTA              ]
[+] EMBL BM641436             [                                                          ccgGCAGGATAACAGTTTGCAAGGAGCAG  TTTTTTT T ATTCACCAGTGAAACTTAAACCCTACAGAATATAATCATGAAATTC GTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX607909             [                                                                                                                                                                                                                                                                                                                      CGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGGTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCC                                                                                                                                                                                           ]




>consensus_9927#1
CCGCGGACGCGTGGGTGCACAGCATCGCAGCATCAGCACCACAGCGTTCCACAGTGCAGG
ATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTTAAACCCTACAGA
ATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCGCTACCTCGGCCC
AGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTGGTCCCGAGGCGA
GCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGTACGTCTACAGCT
ACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGAACCCGGGCACGC
CCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCT
ACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCAT
CCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGA
CCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTT
ATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAAT
GATATGATTGCC

consensusID : consensus_9927#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 470
fasta sequence

                              [CCGGCACAGCATCGCAGCATCAGCACCACAGCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCAGCTACCCATTTCCATACTGATCGG]

[+] EMBL BM638838             [CCGGCACAGCATCGCAGCATCAGCACCACAGCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTCCCAGCTACCCATTTCCATACTGATCGG]




>consensus_9927#2
CCGGCACAGCATCGCAGCATCAGCACCACAGCGTCCGCTGCCCATCCCGCTGCGGAATCC
GGGCGTGTACGGCTTCCTGAAGAACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGG
CTCGTACTCCTACACCGGACCGGACGGTGTCGTCTACACCATCAACTACATTGCCGACGA
GAACGGATACCGTGCCGAGGGTGCGCACATCCCATCCGCCCCACGGTACAACCCGCGCTA
TCCCGGCCAGTACCAATAGACGCTCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGA
CAAAGCGCGCAAGATCTGCGGGGTCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAA
AGATCACTCGTACCCTTCGGTTGAAACGCCGTAATGATATGATTGCCCATCCTGTCGCCC
AACCTACGAGGACCTGCGTCCTCCCAGCTACCCATTTCCATACTGATCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9927#0      AGTATCATACCTCAGCCAAGCATCCAGTGCACAGCATCGCAGCATCAGCACCACAGCGTT 60
consensus_9927#1      ---------CCGCGGACGCGTG---GGTGCACAGCATCGCAGCATCAGCACCACAGCGTT 48
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      CCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTT-ATAATTCACCAGTGAAACTT 119
consensus_9927#1      CCACAGTGCAGGATAACAGTTTGCAAGGAGCAGTTTTTTTATAATTCACCAGTGAAACTT 108
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      AAACCATACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCG 179
consensus_9927#1      AAACCCTACAGAATATAATCATGAAATTCGTCGTACTGCTCGTTGCCGCACTGGTTGCCG 168
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      CTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGCGTGTACGGTG 239
consensus_9927#1      CTACCTCGGCCCAGATTCGTCCGCTGCCCATCCCGCTGCGGAATCCGGGTGTGTACGGTG 228
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      GTCCCGAGGCGAGCGCCGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGT 299
consensus_9927#1      GTCCCGAGGCGAGCGCGGTTATCCTGAACCAGGTGTACGAACCGAACCCGGACGGCTCGT 288
consensus_9927#2      -----------------------------CCGGCACAGCATCGCAGCATCAGCACCACA- 30
                                                   * **   *  * *  * *     *  * *  

consensus_9927#0      ACGTGTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGA 359
consensus_9927#1      ACGTCTACAGCTACGAGACGAGCAACGGCATCCGGGCCGATCAGCGCGGCTTCCTGAAGA 348
consensus_9927#2      GCGTCC---GCTGCCCATCCCGCTGCGGAATCCGGGCG----TGTACGGCTTCCTGAAGA 83
                       ***     *** *    *  **  *** ********      *  **************

consensus_9927#0      ACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGG 419
consensus_9927#1      ACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGG 408
consensus_9927#2      ACCCGGGCACGCCCGGCGAGGCACAGGTGATGCAGGGCTCGTACTCCTACACCGGACCGG 143
                      ************************************************************

consensus_9927#0      ACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTG 479
consensus_9927#1      ACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTG 468
consensus_9927#2      ACGGTGTCGTCTACACCATCAACTACATTGCCGACGAGAACGGATACCGTGCCGAGGGTG 203
                      ************************************************************

consensus_9927#0      CGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGC 539
consensus_9927#1      CGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGC 528
consensus_9927#2      CGCACATCCCATCCGCCCCACGGTACAACCCGCGCTATCCCGGCCAGTACCAATAGACGC 263
                      ************************************************************

consensus_9927#0      TCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGG 599
consensus_9927#1      TCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGG 588
consensus_9927#2      TCCCAGTAAGGACCCAGTTGAGGGGACCGGAGGGTGACAAAGCGCGCAAGATCTGCGGGG 323
                      ************************************************************

consensus_9927#0      TCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTG 659
consensus_9927#1      TCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTG 648
consensus_9927#2      TCTGTGATATTTATTAGCTAAAAGATCGAGCTGCTAAAGATCACTCGTACCCTTCGGTTG 383
                      ************************************************************

consensus_9927#0      AAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTC 719
consensus_9927#1      AAACGCCGTAATGATATGATTGCC------------------------------------ 672
consensus_9927#2      AAACGCCGTAATGATATGATTGCCCATCCTGTCGCCCAACCTACGAGGACCTGCGTCCTC 443
                      ************************                                    

consensus_9927#0      CCATCTACCCATTTCCATACTAATCGGTCACCCTTCCACCTCACCCGAGCTCCATCCAAT 779
consensus_9927#1      ------------------------------------------------------------
consensus_9927#2      CCAGCTACCCATTTCCATACTGATCGG--------------------------------- 470
                                                                                  

consensus_9927#0      AGCCATTAGCCAGCCAGACCCAGCAGCAGCAGCAACCCGTGATTTGTAGTACAATGCTTC 839
consensus_9927#1      ------------------------------------------------------------
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TGCTCCGCACGGCTACCACCTTTAAGTCCAACCATGACACTTCGACACCGCGGTAAAGCA 899
consensus_9927#1      ------------------------------------------------------------
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      TCCGCCGTGCCGTGTGCGGATAGTACACGGTGCGACATCGAAGACATTTAGCCCTGCGCG 959
consensus_9927#1      ------------------------------------------------------------
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      GACGGACGGACCATGATCGCCTAATGATGGTCGGTTCGGACTGTACAAGCACTTTTGTAA 1019
consensus_9927#1      ------------------------------------------------------------
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      AATAACTTTATGCCCATCCCGCTTGACCAGCCGCCTCTGGCTGGGCCAGTATACTCTCTT 1079
consensus_9927#1      ------------------------------------------------------------
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      GTTTATGTATCCATTCGTTTGCTCACGTTGCAGTTGAATATTGTATTACGTACCGATTTT 1139
consensus_9927#1      ------------------------------------------------------------
consensus_9927#2      ------------------------------------------------------------
                                                                                  

consensus_9927#0      AATAAATCACGCAACAGCCTTCACAAAACAGCC 1172
consensus_9927#1      ---------------------------------
consensus_9927#2      ---------------------------------