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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9968#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1467 fasta sequence
[TTTTTTTTTTTTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGTAAAA-ACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC-TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG-TCGCCATCAGCGAAATCATGGTC-GAGTACACCTCGAT--CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC-TCCTCGTAAAACGTTA-CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC-CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA-TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCCCTAGTTTTTTGCTTGCTTTTTTTTG]
[+] EMBL AGA281405 [TTTTTTTTTTTTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGTTAAA ACACACACATCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGATATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGACCGCTCACGCCCTCGCTGGCCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGCACGACCGAGTAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTCGAGATGCCGCGCACAAACAGTTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAACGCCCACACCGGCAACATTCGGCCCTT ]
[+] EMBL CNS09AZG [ TTTTATGTGGTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCATTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGC ]
[+] EMBL AGA280163 [ TTTTTTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGT AAA ACACACACATCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGATATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTAC ]
[+] EMBL AGA283984 [ TTTTTTTTAAGATTTAAACAAACATA TTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAATAAA ACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGCTTTGAT ACTGCCACGTGCGCCGCAAACTGGAGCATCATCGCGC ]
[+] EMBL CNS08Q7J [ taTTTTTAAGATTTAAACAAGCATATTTTTTCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAAagt ]
[+] EMBL CNS09I4J [ AAGA TTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTAC ACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTTCGCGTTCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGCACACCTCGAT CACCTGGCTCTGGGGGGGGAAATCGCGCGTCCG ]
[+] EMBL CNS08LGH [ AAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGT AAA ACACACACATCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGATATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGACCGCTCACGCCCTCGCTGGCCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGCACGACCGAGTAGCCCGAGTCCATTTTGTCG ]
[+] EMBL CNS08G2R [ ATATTTTTTCTGTATTTTCTTCCTTGCAACGCGCAATGAGT AAA ACACACACATCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGATATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGACCGCTCACGCCCTCGCTGGCCAGCGTTTt ]
[-] EMBL CNS08Q7I [ TCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATAACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGGGGCG TCCACAAagt ]
[+] EMBL CNS09M7S [ TCTGTATTTTCTTCCTTGCAACACGCAATGAGTAAAACACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGCTAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACTCCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAG ]
[-] EMBL BX606101 [ TTGCCCTCCAGCTTGT AAACTCACCCACCTTGGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACTTGCCCAGC TTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCTTGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCTCGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGCGCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG TCGCCATCAGCGAAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCA ]
[-] EMBL BM628419 [ GGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCGTTCGCCATCAGCGAAATCATGGTCTGAGTACACCTCGATCCCCCCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGCTTCCTCGTAAAACGTTACCCCGTCTGCACATGATCCTGGTCGAGATGCCGCGCACAAACAGTTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAACGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGCGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGcgg ]
[-] EMBL CNS09AZF [ AAATCATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAATTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCCCTAGTTTTTTGCTTGCTTTTTTTTG]
[-] EMBL CNS09M7R [ CATGGTC GAGTACACCTCGAT CACCTGGCTCTGGGCGGCGAAATCGCGCGTCCGAGCGCCGCGCCGC TCCTCGTAAAACGTTA CCCGTCTGCACATGATCCTGGTTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTCTCGAATTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGC ]
[-] EMBL CNS08LGG [ TATTTCGACAGACCGAGCGATATGCTCGGCCCTACCAACGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGCGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCGGCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGATTTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAA TTTGCACT GCCCTAGTTTT ]
[-] EMBL AGA283018 [ ATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGCGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTTGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGG ]
[-] EMBL BM637350 [ CTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGCGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCCCTAGTTTTTTGCcgg ]
[-] EMBL CNS09I4I [ GAGCGATGCAGAGTAAAACGGAACCACTGCCGCTATGCTTATGCATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTGGCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTTCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGTGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAATTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTT ]
[-] EMBL BM642037 [ CAGCGTCATGCCACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCcgg ]
[-] EMBL BX603644 [ CACGGACTAGAAGCACGCTGCCGATACCCTTCCACAGCGTCGTAACGCCCTGCCGCTGGTGCAGATGCACAATCACCGGCAGCAGGGTGATCGGCACGACGTGGTACCGCCGGGCGGTGTGATGCACCTGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCCCTAGTTTTTTGCTTGCTTTTTTTTG]
[-] EMBL AGA285280 [ tTGCACAATCACCGGCAGCAGGGTGATCGGTACGACGTGGTACCGCCGGGCGGTGTGATGCACATGGCACTGGCGCCGCAGCACCAAAAACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTATGCAGTGGCAGCGTAAGATCGCGCTC CGAATTGATGAACTGATACGGCGCATCGTACAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTAC ]
[-] EMBL CNS08G2Q [ GCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCAGTGGCAGCGTAAGATCGCGCTC CGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGA TTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTTTGCACTGGCC ]
consensusID : consensus_9968#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence
[CCTNCAGCATCAAGTGCGCGCCGAAACCCTTGTNCAAGGACCGCTCACGCCCTCGTTGCCCAGCGTCTATGCCGGTACCAGTCGACCACCTCACGNTCNGTAGCTGGTCAGAATCGGCACAGACCGAGNTAGCCCGAGTCCAGATTGCTCGATGATTNTGCGCAGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACAGGGTAGAAAATCATCTCCGTCGCCATCAGCGAAATTCATGCGTCGAGTACACCTCGATCACCTGGCTCTGGCCAGGCGAAATCGCAGCGTCCGAGCGCCGCGCCGCTCNCTCGTAAAACGTTACCCGTCTGCACATGATCCTGGTCGAGATGCCAGCGCACAAACAGTTGGCAAACGTAGTTTCGACAGACCGAGCGATATGCTCGGCCACTACCAACGCCCACACCAGGCAACATTCGGCCCTTCTGCGGGACAGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACNAAACCTCGGGGAAT]
[-] EMBL AL930434 [CCTNCAGCATCAAGTGCGCGCCGAAACCCTTGTNCAAGGACCGCTCACGCCCTCGTTGCCCAGCGTCTATGCCGGTACCAGTCGACCACCTCACGNTCNGTAGCTGGTCAGAATCGGCACAGACCGAGNTAGCCCGAGTCCAGATTGCTCGATGATTNTGCGCAGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACAGGGTAGAAAATCATCTCCGTCGCCATCAGCGAAATTCATGCGTCGAGTACACCTCGATCACCTGGCTCTGGCCAGGCGAAATCGCAGCGTCCGAGCGCCGCGCCGCTCNCTCGTAAAACGTTACCCGTCTGCACATGATCCTGGTCGAGATGCCAGCGCACAAACAGTTGGCAAACGTAGTTTCGACAGACCGAGCGATATGCTCGGCCACTACCAACGCCCACACCAGGCAACATTCGGCCCTTCTGCGGGACAGCTCCAGGACAGCAGGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACNAAACCTCGGGGAAT]
consensusID : consensus_9968#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 530 fasta sequence
[GCACGCTTGCCCGATACCCTTGCCACAGCGGTCCGTTAACGCCCCTGGCCCGCTGGTGCCAGATGCACAATCGACCGTCAGCCAGGGCTGATCGGCACGACGCTGGTACCGCCGGGCGGTGTCGATGCACCTGGCACTGGCGCCGCAGCACCGTAGATACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCACGTGGCAGCGTAAGATCGCGCTCCCGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGATTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTGTGCACTGGCCCTAGTTTTTTGCCNCGTGCCGATTCTGCC]
[-] EMBL BX468892 [GCACGCTTGCCCGATACCCTTGCCACAGCGGTCCGTTAACGCCCCTGGCCCGCTGGTGCCAGATGCACAATCGACCGTCAGCCAGGGCTGATCGGCACGACGCTGGTACCGCCGGGCGGTGTCGATGCACCTGGCACTGGCGCCGCAGCACCGTAGATACGGATGGCATAGCAGGTTCTCCGTAATCAGGCTGATGAGGTTAACGCTCGCACCGAGATATTTCCGCAGCGATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAACGTTTTTGTGCTTCTGCACGTGGCAGCGTAAGATCGCGCTCCCGAGTTGATGAACTGATACGGCGCATCGTCCAGGGTGGATTTGTAAGCGGACAGGAACCGTGCATTATCTAACTCATCCTCATCTTCCAGGTACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACATCTATTTGCTAAACAAATCCTAGATATTTTTGCACAATTGTGCACTGGCCCTAGTTTTTTGCCNCGTGCCGATTCTGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9968#0 TTTTTTTTTTTTTTAAGATTTAAACAAACATATTTTTTCTGTATTTTCTTCCTTGCAACG 60
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 CGCAATGAGTAAAAACACACACACCCTACGATATTTCTTCGCTAAGTGAACTAATGCCGC 120
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 TAATGCTCCGGGACATCGTGGCCGACCCGACGGGCGTCTTGCCCTCCAGCTTGTAAAACT 180
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 CCACCACCTTTGCCGGCGGTTTGCTCGACATCAGCTCGGAAATCTGCGTTATGAACCACT 240
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 TGCCCAGCTTGATCACTGCCACGTGCGCCGCAAACTGCAGCATCATCGCGCCGAAACCCT 300
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 TGTACAGTCCGCTCACGCCCTCGCTGGTCAGCGTTTGCCGGTAGCAGTCGACCACCCCCT 360
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 CGTAGCTGGTCAGAATCGGTACGACCGAATAGCCCGAGTCCAGATTGTCGATGATTGTGC 420
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 GCGTGCCCTGCAGCTGGATCCGGTGCAGGATCGTCTCGAACGGGTAGAAAATCATCTCCG 480
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 TCGCCATCAGCGAAATCATGGTCGAGTACACCTCGATCACCTGGCTCTGGGCGGCGAAAT 540
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 CGCGCGTCCGAGCGCCGCGCCGCTCCTCGTAAAACGTTACCCGTCTGCACATGATCCTGG 600
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 TTGAGATGCCGCGCACAAACAGCTGGCAAACGTATTTCGACAGACCGAGCGATATGCTCG 660
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 GCCCTACCAAGGCCCACACCGGCAACATTCGGCCCTTCTGCGGGACGCTCCAGGACAGCA 720
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 GGCGGCTCGCTCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGC 780
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 TCTGGACGGTTTCGACGAGCGATGCAGAGTAAAACGGAACGACTGCCGCTATGCTTATGC 840
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 ATTTCAGCAGCAAATGTTGACCGAACTGTTTGACAGTAGTTTTAGCATTAATTTCCTTTG 900
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ------------------------------------------------------------
consensus_9968#0 GCCAGGGTGTAAACTTTGATATCACATCCTCCACGGCCAGCGTCATGCCACGGACTAGAA 960
consensus_9968#2 ------------------------------------------------------------
consensus_9968#1 ---------------------------------------------------CCTNCAGCA 9
consensus_9968#0 GCACGCTG---CCGATACCCTT-CCACAGCG--TCGT-AACGCCCTG-----CCGCTG-- 1006
consensus_9968#2 GCACGCTTGC-CCGATACCCTTGCCACAGCGGTCCGTTAACGCCCCTG--GCCCGCTG-- 55
consensus_9968#1 TCAAGTGCGCGCCGAAACCCTTGTNCAAGGA--CCGCTCACGCCCTCGTTGCCCAGCGTC 67
** * **** ****** ** ** ****** ** *
consensus_9968#0 -GTGC-AGATGCA--CAATC-ACCGGCAGCAGG-G--TGATCGGCA-CGACG-TGGTACC 1056
consensus_9968#2 -GTGCCAGATGCA--CAATCGACCGTCAGCCAG-GGCTGATCGGCA-CGACGCTGGTACC 110
consensus_9968#1 TATGCCGGTACCAGTCGACCACCTCACGNTCNGTAGCTGGTCAGAATCGGCACAGACCGA 127
*** * ** * * * * * * ** ** * * ** * *
consensus_9968#0 GCCGGGCGGTGT-GATGC-ACCTGGCACTGGCGCCGCAGCACC--AAAAACGGATGGCAT 1112
consensus_9968#2 GCCGGGCGGTGTCGATGC-ACCTGGCACTGGCGCCGCAGCACCGTAGATACGGATGGCAT 169
consensus_9968#1 GNTAGCCCGAGTCCAGATTGCTCGATGATTNTGC-GCAGTGCCCTGCAGCTGGATC-CGG 185
* * * * ** * * * * ** **** ** * **** *
consensus_9968#0 AGCAGGTTCTCCGTAATCAGGCTGATGAGGT-----TAACGCTCGCACCGAGATATTTCC 1167
consensus_9968#2 AGCAGGTTCTCCGTAATCAGGCTGATGAGGT-----TAACGCTCGCACCGAGATATTTCC 224
consensus_9968#1 TGCAGGATCGTCTCGAACAGGGTAGAAAATCATCTCCGTCGCCATCAGCGAAATTCATGC 245
***** ** * * **** * * *** ** *** ** * *
consensus_9968#0 GCAGCG-ATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAAC-GTTTTTGTGCTTCTG 1225
consensus_9968#2 GCAGCG-ATATTTCATCGTCCGGGCTTTCGTACAGTGGTTGAAC-GTTTTTGTGCTTCTG 282
consensus_9968#1 GTCGAGTACACCTCGATCACCTGGCTCTGGCCAGGCGAAATCGCAGCGTCCGAGCGCCGC 305
* * * * * ** ** **** * * * * * * * * ** *
consensus_9968#0 CA-GTGGCAGCGTAAGATCGCGCTCC-GAGTTGATGAACTGATACGGCGCATCGTC-CAG 1282
consensus_9968#2 CACGTGGCAGCGTAAGATCGCGCTCCCGAGTTGATGAACTGATACGGCGCATCGTC-CAG 341
consensus_9968#1 GCCGCTCNCTCGTAAAACGTTACCCGTCTGCACATGATCCTGGTCGAGATGCCAGCGCAC 365
* ***** * * * * **** * ** * * **
consensus_9968#0 GGTGGATTTGTAAGCGGAC-----AGGAACCGTGCATTAT-CTAACTCATCCTCATCTTC 1336
consensus_9968#2 GGTGGATTTGTAAGCGGAC-----AGGAACCGTGCATTAT-CTAACTCATCCTCATCTTC 395
consensus_9968#1 AAACAGTTGGCAAACGTAGTTTCGACAGACCGAGCGATATGCTCGGCCACTACCAACGCC 425
** * ** ** * * **** ** *** ** ** ** * *
consensus_9968#0 CAGGT---ACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACAT 1393
consensus_9968#2 CAGGT---ACCGCCCGTAATCTTCCAGGCCAGCCATTTGGTGATTGTACATCGGCTACAT 452
consensus_9968#1 CACACCAGGCAACATTCGGCCCTTCTGCGGGACAGCTCCAGGACAGCA-GGCGGCT-CGC 483
** * * * * * * * * ** * * ***** *
consensus_9968#0 CTATTTGCTAAACAAATCCTAGATATTT--TTGCACAATTTTGCACTGGCCCTAGTTTTT 1451
consensus_9968#2 CTATTTGCTAAACAAATCCTAGATATTT--TTGCACAATTGTGCACTGGCCCTAGTTTTT 510
consensus_9968#1 TCCCTCGCGGAACACATCGAATATGCCCGGCTTCTCGCTGGCAATGTCGCTCTGGACGGT 543
* ** **** *** * ** * * * * * ** ** * *
consensus_9968#0 TGCTTGCTTTT--TTTTG---------------------------- 1467
consensus_9968#2 TGCCNCGTGCCGATTCTGCC-------------------------- 530
consensus_9968#1 TTCGACGAGCG-ATGCAGAGTAAAACGGAACNAAACCTCGGGGAAT 588
* * * *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||