These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1032 fasta sequence [CCAATCGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT-CGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC-GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA-G--AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC-GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC-CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA-CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT-GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG-ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG-TC-CCTGTGGCGAAGTGAAGGGTTAAT-AAAAAAAGCAGGTGATGCGAATTGTAAAAA] [+] EMBL CNS09CJF [CCAATCGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTTCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAA ] [+] EMBL CNS09OFM [ CGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAGGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCAGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TCGCCTGTGG ] [+] EMBL CNS08OXF [ cCTTTCCGCGCGTTGCAGGCGTCCGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CCGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GAGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCA GTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATTATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGATAAATt ] [+] EMBL CNS094D7 [ CGCGTTGCAGGCGTCCGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCTCCGCAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA GGAAACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATC ] [+] EMBL CNS093TH [ GTTGCAGGCGTCCGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CCGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCA GTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGT ] [+] EMBL CNS09RBH [ cacatgGCAGG GT CGCAAAACCTTTCCAAAAGCCGTAAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CCGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGCGGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAA G AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCA GTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATAGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAA ] [-] EMBL CNS09RBI [ AAACACCCGTAAAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CCGAGGAGGTAACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTAACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCAGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGAAACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGTGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TG CCTGTGGCGAAGTGAA GGTTAAT AAAAAccctgctt ] [-] EMBL CNS09OFN [ AAAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCT CGGAGGAGGTAACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTAACAGAGGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGAAACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCAGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGTTGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTGCTC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCA ] [+] EMBL BX621577 [ ACGTCGGTGGCCTCT CGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGNCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGG AAAAACTGACTGGCTCGACGGAAAACATGTCGTGGTTTGGCAACG ] [-] EMBL CNS09CJG [ GCCGATCGACTACGAGTAACAGAAGCACCGC GGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACAATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGAAACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTTCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTTACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCAGGTGATGCG ] [-] EMBL CNS08OXG [ AAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGCCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TCGCCTGTGGCGAAGTGAAGGGTTAATAAAAAAAAGCAGG GGTGC ] [-] EMBL CNS094D8 [ CCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGAGGTGCAGCCGAAGG AACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGGTGTTTTTCGACATACGGATAGGGAACAGTGATGTCGGCCGTATCAT ] [-] EMBL CNS09MZS [ GAAGCGAAACCCGCAGGTGTTCTTCGAAATAAGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGGGTGCAGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCAGGTG ] [-] EMBL CNS09HLV [ AGGTGTTCTTCGACATACGGATAGGGGACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCAGGTGATGCGAATTGTA ] [-] EMBL CNS09DLL [ CATCATGGTGCTGCGGGCGGTTGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACC GGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTTTGTGTCAAGGGGGCGATTTTAC CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCGGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGCAGGTTTTGCGAATT TAAAAA] [-] EMBL CNS09CLF [ GAGTTTATGTGTCAAGGGGGCGATTTTACACGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACCGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTGCTC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAAAGC ] [-] EMBL CNS093TI [ GGGGCGATTTTAC CGCAAAAAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGA CGAAAACTTCATCCTTAAGCATACCGGGTTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTAACTGGCTCGACGGAAAGCATGTCGT GTTTGGTAACGTTATTAGCGGCGCCGATGTAGTACGAAAAATGGAACGCTGTGG ATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTGctc ] [-] EMBL CNS09KOQ [ GGAACGCTGTGGTATCGAAGGGCGGACGAGTGCAGCAGAAGGTGACGATTG TC CCTGTGGCGAAGTGAAGGGTTAAT AAAAAA ] consensusID : consensus_9975#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 860 fasta sequence [TGGGTAAAAAAATCCAATCGAGAATAACAGCAGCTTTCCGCGCG-TTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACG-AGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACG-G-ACGATACG-CGTCAACACGGCGAAACCGCAGCGCATCAAG-G-A-GGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAG-CACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGAACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTACCGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGTGTTTGGCAACGTTATTAGCG] [+] EMBL CNS09DLK [TGGGTAAAAAAAAACAATCGAGAATAACAGCAGCTTTCCGCGCG TTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACG AGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACG G ACGATACG CGTCAACACGGCGAAACCGCAGCGCATCAAG G A GGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAG CACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGAACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGT ] [+] EMBL CNS09HLU [TGGGTAAACAAATCCAATCGAGAATAACAGCAGCTTTCCGCGCG TTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACG AGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACG G ACGATACG CGTCAACACGGCGAAACCGCAGCGCATCAAG G A GGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGT CCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGA ] [+] EMBL CNS09MZR [ AAATCCAATCGAGAATAACAGCAGCTTTCCGCGCGCTTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACG AGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACG G ACGATACG CGTCAACACGGCGAAACCGCAGCGCATCAAG G A GGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAG CACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGAACCGAAAGCGGCGGAAGAGAAGAAGCGCAACCCGCAGTGTTCTTCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGTGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCTACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTACCGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACGAAAACTTCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGTGTTTGGCAACGTTATTAGCG] [+] EMBL CNS09CLE [ CAATCGAGAATAACAGCAGCTTTCCGCGCG TTGCAGGCGTCCACAAAACCTTTCCAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGCAGTCACAGAAGCACCGCGGGTTCGCCTTCATCGAGTTTGAAAACGCGGAAGATGCGGCCGCCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGCACGCGCACGATACGCCGTCAACACGGCGAAACCGCAGCGCATCAAGCGCAGGGGCAGCAATC ] consensusID : consensus_9975#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 512 fasta sequence [CAGATCGCAGAGGTGTATACAGCAGCTTTCCGCGCGTCGCAGGCGTCGCAAAACCTTTCCAAAGGCCGTAAACACCCCAATAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCTCGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGCGGGTTCGCCTTCATCCGAGTTTGAAAACGCGGAAGATGCGGNCGNCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGGGAAACCGAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGGAACCGAAAGCGGCGGAAGAGAACGAAGCGC] [+] EMBL AL696205 [CAGATCGCAGAGGTGTATACAGCAGCTTTCCGCGCGTCGCAGGCGTCGCAAAACCTTTCCAAAGGCCGTAAACACCCCAATAACGATGACGAGCGACAAACGCACCGTGTACGTCGGTGGCCTCTCGGAGGAGGTGACAGAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACCTGGTGGACATACAGATGCCGATCGACTACGAGTCACAGAAGCACCGCGGGTTCGCCTTCATCCGAGTTTGAAAACGCGGAAGATGCGGNCGNCGCCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGGGAAACCGAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGAGGTGCAGCCGAAGGAACCGAAAGCGGCGGAAGAGAACGAAGCGC] consensusID : consensus_9975#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 347 fasta sequence [CCCCGAGTTTACGTGTACTCGGTGGCCCTCTCGTAGGGAGGTGACAAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACTGGTGGACATACAGATGCCGATCCGACTACGAGGTCACAGAAGCACCGCGGGNTTCGCCTTCATCGAGGTTTGAAAACGCGGAAGATGCGGGCCGCCGACCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGT] [+] EMBL AL932930 [CCCCGAGTTTACGTGTACTCGGTGGCCCTCTCGTAGGGAGGTGACAAGAAGCTAATTACCGACGCATTCATCCCGTTCGGTGACTGGTGGACATACAGATGCCGATCCGACTACGAGGTCACAGAAGCACCGCGGGNTTCGCCTTCATCGAGGTTTGAAAACGCGGAAGATGCGGGCCGCCGACCGTCGACAACATGAACGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAAGGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGCAACGCTCAAGAACGATGGGGAGAATGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9975#2 CAGATCGCAGAGGTGTATACAGCAGCTTTCCGCGCGTCGCAGGCGTC-GCAAAACCTTTC 59 consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 -----CCAATCGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCGCAAAACCTTTC 55 consensus_9975#1 ----------------------------------------------------TGGGTAAA 8 consensus_9975#2 CAAAGGCCGTAAACACCC-CAATAACGATG-ACGAGCGACAAACGCACCGTGTACGTCGG 117 consensus_9975#3 ------------------------------------CCCCGAGTTTAC-GTGTAC-TCGG 22 consensus_9975#0 CAAAAGCCGTAAACACCCGTAAAAACGATG-ACGAGCGACAAACGCACCGTGTACGTCGG 114 consensus_9975#1 AAAATCCAATCGAGAATAACAGCAGCTTTCCGCGCGTTGCAGGCGTCCACAAAACCTTTC 68 * * ** * consensus_9975#2 TGGCC-TCTCGGAGG-AGGTGACAGAGAAG-CTAATTACCGACGCATTCATCCCGTTCGG 174 consensus_9975#3 TGGCCCTCTCGTAGGGAGGTGACA-AGAAG-CTAATTACCGACGCATTCATCCCGTTCGG 80 consensus_9975#0 TGGCC-TCTCGGAGG-AGGTGACAGAGAAG-CTAATTACCGACGCATTCATCCCGTTCGG 171 consensus_9975#1 CAAAAGCCGTAAACACCCGCAAAAACGATGACGAGCGACAAACGCATTCATCCCGTTCGG 128 * * * * * ** * * * ** ******************* consensus_9975#2 TGACCTGGTGGACATACAGATGCCGATC-GACTACGAG-TCACAGAAGCACCGCGGGTT- 231 consensus_9975#3 TGAC-TGGTGGACATACAGATGCCGATCCGACTACGAGGTCACAGAAGCACCGCGGGNTT 139 consensus_9975#0 TGACCTGGTGGACATACAGATGCCGATC-GACTACGAG-TCACAGAAGCACCGCGGGTT- 228 consensus_9975#1 TGACCTGGTGGACATACAGATGCCGATC-GACTACGAG-TCACAGAAGCACCGCGGGTT- 185 **** *********************** ********* ****************** * consensus_9975#2 CGCCTTCATCCGAGTTTGAAAACGCGGAAGATGCGGNCGNC--GCCGTCGACAACATGAA 289 consensus_9975#3 CGCCTTCATCGAGGTTTGAAAACGCGGAAGATGCGGGCCGCCGACCGTCGACAACATGAA 199 consensus_9975#0 CGCCTTCATC-GAGTTTGAAAACGCGGAAGATGCGGCCGCC--GCCGTCGACAACATGAA 285 consensus_9975#1 CGCCTTCATC-GAGTTTGAAAACGCGGAAGATGCGGCCGCC--GCCGTCGACAACATGAA 242 ********** *********************** * * **************** consensus_9975#2 CGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGGGAAACCG-AGCGCATCAA 348 consensus_9975#3 CGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAA 259 consensus_9975#0 CGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAA 345 consensus_9975#1 CGATTCGGAGCTGTGCGGACGGACGATACGCGTCAACACGGCGAAACCGCAGCGCATCAA 302 ***************************************** ******* ********** consensus_9975#2 GGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGC 408 consensus_9975#3 GGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGC 319 consensus_9975#0 GGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAGAAGCACGCCGGGGC 405 consensus_9975#1 GGAGGGCAGCAATCGGCCGGTCTGGGCCGACGACAATTGGTTGCAAAAGCACGCCGGGGC 362 ********************************************* ************** consensus_9975#2 AACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGA 468 consensus_9975#3 AACGCTCAAGAACGATGGGGAGAATGGT-------------------------------- 347 consensus_9975#0 AACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGATACTGGCACGGATGA 465 consensus_9975#1 AACGCTCAAGAACGATGGGGAGAATGGTGCCGAGCAGCCGATGGACACTGGCACGGATGA 422 **************************** consensus_9975#2 GGTGCAGCCGAAGGAACCGAAAGCGGCGGAAGAGAACGAAGCGC---------------- 512 consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 GGTGCAGCCGAAG-AACCGAAAGCGGCGGAAGAGAA-GAAGCGCAACCCGCAGGTGTTCT 523 consensus_9975#1 GGTGCAGCCGAAG-AACCGAAAGCGGCGGAAGAGAA-GAAGCGCAACCCGCAGTGTTCTT 480 consensus_9975#2 ------------------------------------------------------------ consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 TCGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATG 583 consensus_9975#1 CGACATACGGATAGGGAACAGTGATGTCGGCCGCATCATCATGGTGCTGCGGGCGGATGT 540 consensus_9975#2 ------------------------------------------------------------ consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 TGGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCT 643 consensus_9975#1 GGTGCCCAAGACGGCGGAAAACTTCCGTGCACTCTGCACCGGCGAACAGGGCTTTGGCTA 600 consensus_9975#2 ------------------------------------------------------------ consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 ACAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTA 703 consensus_9975#1 CAAGGGATCGACCTTTCATCGCATCATACCGGAGTTTATGTGTCAAGGGGGCGATTTTAC 660 consensus_9975#2 ------------------------------------------------------------ consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 CCGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACGAAAACT 763 consensus_9975#1 CGCAAACAACGGCTCGGGCGGAAAATCCATCTACGGTAAGAAGTTTGCGGACGAAAACTT 720 consensus_9975#2 ------------------------------------------------------------ consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 TCATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGA 823 consensus_9975#1 CATCCTTAAGCATACCGGATTCGGTGTGCTTTCGATGGCAAACTCTGGCCCAAACACGAA 780 consensus_9975#2 ------------------------------------------------------------ consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 ATGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCG 883 consensus_9975#1 TGGATCCCAGTTTTTCATCTGTACGGAAAAAACTGACTGGCTCGACGGAAAGCATGTCGT 840 consensus_9975#2 ------------------------------------------------------------ consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 TGTTTGGCAACGTTATTAGCGGTGCCGATGTGGTACGAAAAATGGAACGCTGTGGATCGA 943 consensus_9975#1 GTTTGGCAACGTTATTAGCG---------------------------------------- 860 consensus_9975#2 ------------------------------------------------------------ consensus_9975#3 ------------------------------------------------------------ consensus_9975#0 AGGGCGGACGAGTGCAGCAGAAGGTGACGATTGTCCCTGTGGCGAAGTGAAGGGTTAATA 1003 consensus_9975#1 ------------------------------------------------------------ consensus_9975#2 ----------------------------- consensus_9975#3 ----------------------------- consensus_9975#0 AAAAAAGCAGGTGATGCGAATTGTAAAAA 1032 consensus_9975#1 ----------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||