These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1065#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 684 fasta sequence [GCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATACGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAGCTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGTAATGAACGAATATCGTAATGAAACTGCGTGGAGAAAAAGAAAAGAAAGAAAGAAAGAAAGAAAATGAAATATCGCGAGATCGAATTGGTTAATTATTGGTTAATTTTGCACGAATTTCGCGCGTACGATCAAAGCGTATAAACGATTGACCGAGCGTATATAGAAATAATTATTATTTTTTACGATAATACGACTCGTAGACGAACGTAAGAATTAAGTTCCGGGAAATCGTAATCTTTTCTAATCGATAATTTTTATCTTGGGATAATGGGATTAACGCAAGTCAATTACGAATT] [+] EMBL BI502862 [GCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATACGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAGCTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAAAGAGAGAGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGTAATGAACGAATATCGTAATGAA ] [+] EMBL BI513505 [ GAAAGAGAGAGAGAGTGATAGAGAGAATGAAT GAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGTAATGAACGAATATCGTAATGAAACTGCGTGGAGAAAAAGAAAAGAAAGAAAGAAAGAAAGAAAATGAAATATCGCGAGATCGAATTGGTTAATTATTGGTTAATTTTGCACGAATTTCGCGCGTACGATCAAAGCGTATAAACGATTGACCGAGCGTATATAGAAATAATTATTATTTTTTACGATAATACGACTCGTAGACGAACGTAAGAATTAAGTTCCGGGAAATCGTAATCTTTTCTAATCGATAATTTTTATCTTGGGATAATGGGATTAACGCAAGTCAATTACGAATT] consensusID : consensus_1065#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 373 fasta sequence [CGCGCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATACGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAGCTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGT] [+] EMBL BI508630 [CGCGCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATACGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAGCTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAAATGGGATAACGACACACTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCACATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTAAATTTTTCATAGCACGCTACTTCCGCTACGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1065#0 ---GCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATA 57 consensus_1065#1 CGCGCGACATTTAAATGCAAGTATTCGCACAGGCCTACGATAAGAGAAACTCTTTATATA 60 ********************************************************* consensus_1065#0 CGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAG 117 consensus_1065#1 CGTATCCATGATGTTTCACGTGTACACTAAATAAAAACACAAGCATTAATTGTCATTCAG 120 ************************************************************ consensus_1065#0 CTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAGAGAGAG 177 consensus_1065#1 CTAATCGACGATCGGACGACATGCGTAGCGCTCTAGAAAGAAAGAGAGAGAGAG------ 174 ****************************************************** consensus_1065#0 AGAGAGAGTGATAGAGAGAATGAATGAGAGAGAGAGAGAGAGAAATGGGATAACGACACA 237 consensus_1065#1 --------TGATAGAGAGAATGAATGAGAGAGAGAGA----GAAATGGGATAACGACACA 222 ***************************** ******************* consensus_1065#0 CTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCAC 297 consensus_1065#1 CTGAAAAGCTTTTGCCTCCTATCGTAATGACGGAAAGACTTTTCACTCGCGTTACACCAC 282 ************************************************************ consensus_1065#0 ATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTA 357 consensus_1065#1 ATGTGCAATTGGCCTAATTGATCACGGATCCTATTTGACCTTTCTTCCCTCGAGTCTTTA 342 ************************************************************ consensus_1065#0 AATTTTTCATAGCACGCTACTTCCGCTACGTAATGAACGAATATCGTAATGAAACTGCGT 417 consensus_1065#1 AATTTTTCATAGCACGCTACTTCCGCTACGT----------------------------- 373 ******************************* consensus_1065#0 GGAGAAAAAGAAAAGAAAGAAAGAAAGAAAGAAAATGAAATATCGCGAGATCGAATTGGT 477 consensus_1065#1 ------------------------------------------------------------ consensus_1065#0 TAATTATTGGTTAATTTTGCACGAATTTCGCGCGTACGATCAAAGCGTATAAACGATTGA 537 consensus_1065#1 ------------------------------------------------------------ consensus_1065#0 CCGAGCGTATATAGAAATAATTATTATTTTTTACGATAATACGACTCGTAGACGAACGTA 597 consensus_1065#1 ------------------------------------------------------------ consensus_1065#0 AGAATTAAGTTCCGGGAAATCGTAATCTTTTCTAATCGATAATTTTTATCTTGGGATAAT 657 consensus_1065#1 ------------------------------------------------------------ consensus_1065#0 GGGATTAACGCAAGTCAATTACGAATT 684 consensus_1065#1 --------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |