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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_108#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 902 fasta sequence
[CCTCATCTTCCATTCTTTTGGAGGTGGTACTGGTTCTGGTTTCACTTCTCTTTTGATGGAACGTCTTTCTGTAGACTATGGCAAGAAATCAAAGTTGGAATTTGCTATTTATCCTGCTCCACAAGTTTCTACTGCAGTTGTTGAACCATATAATTCAATTCTCACCACACATACCACTCTTGAACATTCCGATTGCGCATTTATGGTTGACAATGAAGCCATTTACGATATTTGTCGTCGTAATTTAGACATCGAAAGACCTACCTATACTAATTTAAATCGACTAATTGGCCAAATTGTATCCTCTATTACAGCTTCTTTGCGATTTGACGGTGCATTGAACGTTGATTTGACTGAATTCCAGACAAACTTAGTACCTTATCCCAGAATTCATTTCCCCTTGGTAACTTATGCACCTGTTATTTCTGCAGAGAAGGCATATCATGAACAACTCTCTGTATCAGAGATTACGAATGCGTGTTTTGAACCAGCAAACCAAATGGTGAAATGTGATCCTCGCCATGGAAAATACATGGCCTGCTGTATGTTGTATAGNNNTGATGTTGTACCCAAAGATGTAAATGCAGCAATTGCCACCATAAAAACAAAACGTACTATTCAATTTGTTGATTGGTGCCCAACTGGATTTAAAGTTGGTATTAATTATCAGCCTCCAACTGTGGTACCTGGTGGTGATCTTGCTAAAGTACAACGTGCTGTTTGTATGTTGTCAAACACAACCGCTATTGCGGAAGCTTGGGCTCGTCTTGATCATAAGTTCGATTTGATGTATGCCAAACGTGCATTTGTCCATTGGTACGTTGGTGAAGGTATGGAAGAAGNNGAATTTTCCGAAGCACGTGAAGATCTAGCAGCTCTTGAAAAAGATTATGAAGAAGTCG]
[+] EMBL BI509027 [CCTCATCTTCCATTCTTTTGGAGGTGGTACTGGTTCTGGTTTCACTTCTCTTTTGATGGAACGTCTTTCTGTAGACTATGGCAAGAAATCAAAGTTGGAATTTGCTATTTATCCTGCTCCACAAGTTTCTACTGCAGTTGTTGAACCATATAATTCAATTCTCACCACACATACCACTCTTGAACATTCCGATTGCGCATTTATGGTTGACAATGAAGCCATTTACGATATTTGTCGTCGTAATTTAGACATCGAAAGACCTACCTATACTAATTTAAATCGACTAATTGGCCAAATTGTATCCTCTATTACAGCTTCTTTGCGATTTGATGGTGCATTGAACGTTGATTTGACTGAATTCCAGACAAACTTAGTACCTTATCCCAGAATTCATTTCCCCTTGGTAACTTATGCACCTGTTATTTCTGCAGAGAAGGCATATCATGAACAACTCTCTGTATCAGAGATTACGAATGCGTGTTTTGAACCAGCAAACCAAATGGTGAAATGTGATCCTCGCCATGGAAAATACATGGC ]
[+] EMBL BI506790 [ TCCATTCTTTTGGAGGTGGTACTGGTTCTGGTTTCACTTCTCTTTTGATGGAACGTCTTTCTGTAGACTATGGCAAGAAATCAAAGTTGGAATTTGCTATTTATCCTGCTCCACAAGTTTCTACTGCAGTTGTTGAACCATATAATTCAATTCTCACCACACATACCACTCTTGAACATTCCGATTGCGCATTTATGGTTGACAATGAAGCCATTTACGATATTTGTCGTCGTAATTTAGACATCGAAAGACCTACCTATACTAATTTAAATCGACTAATTGGCCAAATTGTATCCTCTATTACAGCTTCTTTGCGATTTGACGGTGCATTGAACGTTGATTTGACTGAATTCCAGACAAACTTAGTACCTTATCCCAGAATTCATTTCCCCTTGGTAACTTATGCACCTGTTATTTCTGCAGAGAAGGCATATCATGAACAACTCTCTGTATCAGAGATTACGAATGCGTGTTTTGAACCAGCAAACCAAATGGTGAAATGTGATCCTCGCCATGGAAAATACATGGCCTGCTGTATGTTGTATAGNNNTGATGTTGTACCCAAAGATGTAAATGCAGCAATTGCCACCATAAAAACAAAACGTACTATTCAATTTGTTGATTGGTGCCCAACTGGAT ]
[+] EMBL BI507674 [ TGACGGTGCATTGAACGTTGATTTGACTGAATTCCAGACAAACTTAGTACCTTATCCCAGAATTCATTTCCCCTTGGTAACTTATGCACCTGTTATTTCTGCAGAGAAGGCATATCATGAACAACTCTCTGTATCAGAGATTACGAATGCGTGTTTTGAACCAGCAAACCAAATGGTGAAATGTGATCCTCGCCATGGAAAATACATGGCCTGCTGTATGTTGTATAGAGGTGATGTTGTACCCAAAGATGTAAATGCAGCAATTGCCACCATAAAAACAAAACGTACTATTCAATTTGTTGATTGGTGCCCAACTGGATTTAAAGTTGGTATTAATTATCAGCCTCCAACTGTGGTACCTGGTGGTGATCTTGCTAAAGTACAACGTGCTGTTTGTATGTTGTCAAACACAACCGCTATTGCGGAAGCTTGGGCTCGTCTTGATCATAAGTTCGATTTGATGTATGCCAAACGTGCATTTGTCCATTGGTACGTTGGTGAAGGTATGGAAGAAGNNGAATTTTCCGAAGCACGTGAAGATCTAGCAGCTCTTGAAAAAGATTATGAAGAAGTCG]
consensusID : consensus_108#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 591 fasta sequence
[GCTTTAGCCAACTATCTATCATCCTACGTCCAATTTTTTTACTTCTTTTTTAAGAATTTTGAAAGTTTTCTTTATATTACAAAATGCGTGAATGTATCTCAGTTCATGTTGGACAAGCCGGTGTCCAAATTGGTAATGCGTGTTGGGAATTATATTGTCTAGAACATGGCATCCAACCTGATGGACAAATGCCATCTGACAAAACTATTGGTGGGGGAGATGATAGTTTCAATACGTTTTTTAGTGAAACTGGTGCAGGAAAACATGTACCTAGAGCAGTTTTCATTGATTTGGAACCCACAGTAGTTGATGAAGTACGTACTGGTACTTATCGTCAGCTATTTCATCCAGAACAATTGATTACTGGTAAAGAAGATGCAGCTAACAACTATGCCCGTGGTCATTATACAATTGGGAAAGAAATTGTAGATCTTGTATTAGATAGAATACGTAAATTGGCTGATCAATGTACTGGTCTTCAAGGTTTCCTCATCTTCCATTCTTTTGGAGGTGGTACTGGTTCTGGTTTCACTTCTCTTTTGATGGAACGTCTTTCTGTAGACTATGGCAAGACGTTCCATCAAAAAAAAA]
[+] EMBL BI507118 [GCTTTAGCCAACTATCTATCATCCTACGTCCAATTTTTTTACTTCTTTTTTAAGAATTTTGAAAGTTTTCTTTATATTACAAAATGCGTGAATGTATCTCAGTTCATGTTGGACAAGCCGGTGTCCAAATTGGTAATGCGTGTTGGGAATTATATTGTCTAGAACATGGCATCCAACCTGATGGACAAATGCCATCTGACAAAACTATTGGTGGGGGAGATGATAGTTTCAATACGTTTTTTAGTGAAACTGGTGCAGGAAAACATGTACCTAGAGCAGTTTTCATTGATTTGGAACCCACAGTAGTTGATGAAGTACGTACTGGTACTTATCGTCAGCTATTTCATCCAGAACAATTGATTACTGGTAAAGAAGATGCAGCTAACAACTATGCCCGTGGTCATTATACAATTGGGAAAGAAATTGTAGATCTTGTATTAGATAGAATACGTAAATTGGCTGATCAATGTACTGGTCTTCAAGGTTTCCTCATCTTCCATTCTTTTGGAGGTGGTACTGGTTCTGGTTTCACTTCTCTTTTGAT ]
[+] EMBL BI507496 [ TTTCTTTATATTACAAAATGCGTGAATGTATCTCAGTTCATGTTGGACAAGCCGGTGTCCAAATTGGTAATGCGTGTTGGGAATTATATTGTCTAGAACATGGCATCCAACCTGATGGACAAATGCCATCTGACAAAACTATTGGTGGGGGAGATGATAGTTTCAATACGTTTTTTAGTGAAACTGGTGCAGGAAAACATGTACCTAGAGCAGTTTTCATTGATTTGGAACCCACAGTAGTTGATGAAGTACGTACTGGTACTTATCGTCAGCTATTTCATCCAGAACAATTGATTACTGGTAAAGAAGATGCAGCTAACAACTATGCCCGTGGTCATTATACAATTGGGAAAGAAATTGTAGATCTTGTATTAGATAGAATACGTAAATTGGCTGATCAATGTACTGGTCTTCAAGGTT ]
[+] EMBL BI503899 [ TTTCTTTATATTACAAAATGCGTGAATGTATCTCAGTTCATGTTGGACAAGCTGGTGTCCAAATTGGTAATGCGTGTTGGGAATTATATTGTCTAGAACATGGCATCCAACCTGATGGACAAATGCCATCTGACAAAACTATTGGTGGGGGAGATGATAGTTTCAATACGTTTTTTAGTGAAACTGGTGCAGGAAAAAAaaaa ]
[+] EMBL BI507191 [ TATCTCAGTTCATGTTGGACAAGCCGGTGTCCAAATTGGTAATGCGTGTTGGGAATTATATTGTCTAGAACATGGCATCCAACCTGATGGACAAATGCCATCTGACAAAACTATTGGTGGGGGAGATGATAGTTTCAATACGTTTTTTAGTGAAACTGGTGCAGGAAAACATGTACCTAGAGCAGTTTTCATTGATTTGGAACCCACAGTAGTTGATGAAGTACGTACTGGTACTTATCGTCAGCTATTTCATCCAGAACAATTGATTACTGGTAAAGAAGATGCAGCTAACAACTATGCCCGTGGTCATTATACAATTGGGAAAGAAATTGTAGATCTTGTATTAGATAGAATACGTAAATTGGCTGATCAATGTACTGGTCTTCAAGGTTTCCTCATCTTCCATTCTTTTGGAGGTGGTACTGGTTCTGGTTTCACTTCTCTTTTGATGGAACGTCTTTCTGTAGACTATGGCAAGACGTTCCATCAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_108#0 CCTCATCTTCCATTCTTTTGGAGGTGGTACTGGTTCTGGTTTCACTTCTCTTTTGATGGA 60
consensus_108#1 ------------------------------------------------------------
consensus_108#0 ACGTCTTTCTGTAGACTATGGCAAGAAATCAAAGTTGGAATTTGCTATTTATCCTGCTCC 120
consensus_108#1 ------------------------------------------------------------
consensus_108#0 ACAAGTTTCTACTGCAGTTGTTGAACCATATAATTCAATTCTCACCACACATACCACTCT 180
consensus_108#1 ------------------------------------------------------------
consensus_108#0 TGAACATTCCGATTGCGCATTTATGGTTGACAATGAAGCCATTTACGATATTTGTCGTCG 240
consensus_108#1 ------------------------------------------------------------
consensus_108#0 TAATTTAGACATCGAAAGACCTACCTATACTAATTTAAATCGACTAATTGGCCAAATTGT 300
consensus_108#1 --------------------------------GCTTTAGCCAACTA-TCTATCATCCTAC 27
** * * **** * ** *
consensus_108#0 ATCCTCTATTACAGCTTCTTTGCGATTTGACGGTGCATTGAACGTTGATTTGACTGAATT 360
consensus_108#1 GTCCAATTTTTTTACTTCTTT----TTTAAGAAT--TTTGAAAGT---TTTCTTTATATT 78
*** * ** ******* *** * * ***** ** *** * ***
consensus_108#0 CCAGACAAACTTAGTACCTTATCCCAGAATTCAT-TTCCCCTTGGTAACTTATGCACCTG 419
consensus_108#1 ACA---AAATGCGTGAATGTATCTCAG--TTCATGTTGGACAAGCCGGTGTCCAAATTGG 133
** *** * **** *** ***** ** * * * * *
consensus_108#0 TTATTTCTGCAGAGAAGGCATATCATGAACAACTCTCTGTATCAGAGATTACGAATGCGT 479
consensus_108#1 TAATGCGTGTTGGGAAT-TATATTGTCTAGAACAT--GGCATCCAACCTGATGGACAAAT 190
* ** ** * *** **** * * *** * *** * * * * * *
consensus_108#0 GTT-TTGAACCAGCAAACCAAATGGTGAAATGTGATCCTCGCCATGGAAAATACATGGCC 538
consensus_108#1 GCCATCTGACAAAACTATTGGTGGGGGAGATGATAGTTTCAATACGTTTTTTAGTGAAAC 250
* * ** * * ** ** *** * ** * * ** *
consensus_108#0 TGCTGTATGTTG-TATAGNNNTGATGTTGTACCCAAAGATGTAAATGCAGCAATTGCCAC 597
consensus_108#1 TGGTGCAGGAAAACATGTACCTAGAGCAGTTTTCATTGATTTGGAACCCACAGTAGTTGA 310
** ** * * ** * * ** ** *** * * * ** * *
consensus_108#0 CATAAAAACAAAACGTACTATTCAATTTGTTGATTGGTGCCCAACTGGATTTAAAGTTGG 657
consensus_108#1 TGAAGTACGTACTGGTACTTATCG-TCAGCTATTTCATCCAGAAC--AATTGATTACTGG 367
* * * ***** ** * * * ** * * *** *** * ***
consensus_108#0 TATTAATTAT-CAGCCTCCAACTGTGGTACCTGGTGGTGATCTTGCTAAAGTACAACGTG 716
consensus_108#1 TAAAGAAGATGCAGCTAACAACTATG-CCCGTGGTCATTATACAATTGGGAAAGAAATTG 426
** * ** **** ***** ** * **** * ** * * ** **
consensus_108#0 CTGTTTGTATGTTGTCAAACACAACCGCTATTGCGGAAGCTTGGGCTCGTCTTGATCATA 776
consensus_108#1 TAGATCTTGTATTAGATAGAATACGTAAATTGGCTGATCAATGTACTGGTCTTCAAGGTT 486
* * * * ** * * * * ** ** ** ** ***** * *
consensus_108#0 AGTTCGATTTGATGTATGCCAAACGTGCATTTGTCCATTGGTACGTTGGTGAAGGTATGG 836
consensus_108#1 TCCTCATCTTCCATTCTTTTGGAGGTGGTACTGGTTCTGGTTTCACTTCTC----TTTTG 542
** ** * * * *** ** * * * * * * * * *
consensus_108#0 AAGAAGNNGAATTTTCCGAAGCACGTGAAGATCTAGCAGCTCTTGAAAAAGATTATGAAG 896
consensus_108#1 ATGGAACGTCTTTCTGTAGACTATGGCAAGACGTTCCA--TCAAAAAAAAA--------- 591
* * * ** * * * * **** * ** ** *****
consensus_108#0 AAGTCG 902
consensus_108#1 ------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |