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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1208#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 747 fasta sequence
[TTGACTTGTTCCTTACACTTGATCGCCTGCAGGGTTACTATTTTGGTCTTTCTTTGCTTGTATTTTCACCATTCTTTCGAAGCTTTAACATTAAAGTAAGTCATATAAAAATGTCACAATTGGAGTTAGATCCTCAATTTACACAGGGTTTACATCTTTTACATTCCACTAATAAAGATTCTGCAGAACAATTACGAGCTCTTCTAGATGAAGCAATCAAACAAAAGTATGGACCATCAAAAATGTTATCGAATGTACTACACAAAAAGTATATGATGGAGGAACCAGTACTAAGTGACCATAGCAGCAGTAGTAAAAAGAGCAAAAGCTCCTCTTCTTCTTCTTCCAAACATTCAAGTAAATCAAGCAAAAACAATTCTCCTGTAAATTTACCAACTCGTGACACACCACCTGATATTATTCAGACTGATAATACTTTAGCATTAGAAATATTAGAAGATGATCTGACATGTGTAATTTGCAAAGGAATGGATGTTGGTGCAAGAAACAGACTTGTTGAATGTTTAGAATGTCATTCCTTATATCACCAAGAATGTCATGTTCCACATATTTTAGATTCTCAAATAGATGTGCCAGGATTGGTGTGGTATTGTTCAAACTGTTCCAAATCTCAGG-GTTTCAAAAGAAAGGAGTTCACCAAAAACAGTGATAGAAAATAAATCTAAAGAACAAAAAAAATCCAATTTAAGTGGTGGAAACAAAATAACACCAAATATTCATATTATA]
[+] EMBL BE844324 [TTGACTTGTTCCTTACACTTGATCGCCTGCAGGGTTACTATTTTGGTCTTTCTTTGCTTGTATTTTCACCATTCTTTCGAAGCTTTAACATTAAAGTAAGTCATATAAAAATGTCACAATTGGAGTTAGATCCTCAATTTACACAGGGTTTACATCTTTTACATTCCACTAATAAAGATTCTGCAGAACAATTACGAGCTCTTCTAGATGAAGCAATCAAACAAAAGTATGGACCATCAAAAATGTTATCGAATGTACTACACAAAAAGTATATGATGGAGGAACCAGTACTAAGTGACCATAGCAGCAGTAGTAAAAAGAGCAAAAGCTCCTCTTCTTCTTCTTCCAAACATTCAAGTAAATCAAGCAAAAACAATTCTCCTGTAAATTTACCAACTCGTGACACACCACCTGATATTATTCAGACTGATAATACTTTAGCATTAGAAATATTAGAAGATGATCTGACATGTGTAATTTGCAAAGGAATGGATGTTGGTGCAAGAAACAGACTTGTTGAATGTTTAGAATGTCATTCCTTATATCACCAAGAATGTCATGTTCCACATATTTTAGATTCTCAAATAGATGTGCCAGGATTGGTGTGGTATTGTTCAAACTGTTCCAAATCTCAGGTGTTTCAAAAGAAAGGAGTTCACCAAAA ]
[+] EMBL BI506006 [ ACAGGGTTTACATCTTTTACATTCCACTAATAAAGATTCTGCAGAACAATTACGAGCTCTTCTAGATGAAGCAATCAAACAAAAGTATGGACCATCAAAAATGTTATCGAATGTACTACACAAAAAGTATATGATGGAGGAACCAGTACTAAGTGACCATAGCAGCAGTAGTAAAAAGAGCAAAAGCTCCTCTTCTTCTTCTTCCAAACATTCAAGTAAATCAAGCAAAAACAATTCTCCTGTAAATTTACCAACTCGTGACACACCACCTGATATTATTCAGACTGATAATACTTTAGCATTAGAAATATTAGAAGATGATCTGACATGTGTAATTTGCAAAGGAATGGATGTTGGTGCAAGAAACAGACTTGTTGAATGTTTAGAATGTCATTCCTTATATCACCAAGAATGTCATGTTCCACATATTTTAGATTCTCAAATAGATGTACCAGGATTGGTGTGGTATTGTTCAAACTGTTCCAAATCTCA G GTTTCAAAAGAAAGGAGTTCACCAAAAACAGTGATAGAAAATAAATCTAAAGAACAAAAAAAATCCAATTTAAGTGGTGGAAACAAAATAACACCAAATATTCATATTATA]
consensusID : consensus_1208#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 458 fasta sequence
[CTGCAGGGTTACTATTTTGGTCTTTCTTTGCTTGTATTTTCACCATTCTTTCGAAGCTTTAACATTAAAGTAAGTCATATAAAAATGTCACAATTGGAGTTAGATCCTCAATTTACACAGGGTTTACATCTTTTACATTCCACTAATAAAGATTCTGCAGAACAATTACGAGCTCTTCTAGATGAAGCAATCAAACAAAAGTATGGACCATCAAAAATGTTATCGAATGTACTACACAAAAAGGTAATTAGATAATAACTAATTTAAACACATTATTTTGAGGGTTATCAAGAAAAAAAGAGTAAATCAAAGTGTTTTATATTAATTAAGTTATTATACTTACAGAATTAGTTCTGATATCAGGGCACTCATGAAGCATAGGAGATTTCATTCACGTAAAAAGATATCCAGTATTTGATCCCTCTGTATGCACCATCATTATCATTCATTTTTTGAAT]
[+] EMBL BI510710 [CTGCAGGGTTACTATTTTGGTCTTTCTTTGCTTGTATTTTCACCATTCTTTCGAAGCTTTAACATTAAAGTAAGTCATATAAAAATGTCACAATTGGAGTTAGATCCTCAATTTACACAGGGTTTACATCTTTTACATTCCACTAATAAAGATTCTGCAGAACAATTACGAGCTCTTCTAGATGAAGCAATCAAACAAAAGTATGGACCATCAAAAATGTTATCGAATGTACTACACAAAAAGGTAATTAGATAATAACTAATTTAAACACATTATTTTGAGGGTTATCAAGAAAAAAAGAGTAAATCAAAGTGTTTTATATTAATTAAGTTATTATACTTACAGAATTAGTTCTGATATCAGGGCACTCATGAAGCATAGGAGATTTCATTCACGTAAAAAGATATCCAGTATTTGATCCCTCTGTATGCACCATCATTATCATTCATTTTTTGAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1208#0 TTGACTTGTTCCTTACACTTGATCGCCTGCAGGGTTACTATTTTGGTCTTTCTTTGCTTG 60
consensus_1208#1 --------------------------CTGCAGGGTTACTATTTTGGTCTTTCTTTGCTTG 34
**********************************
consensus_1208#0 TATTTTCACCATTCTTTCGAAGCTTTAACATTAAAGTAAGTCATATAAAAATGTCACAAT 120
consensus_1208#1 TATTTTCACCATTCTTTCGAAGCTTTAACATTAAAGTAAGTCATATAAAAATGTCACAAT 94
************************************************************
consensus_1208#0 TGGAGTTAGATCCTCAATTTACACAGGGTTTACATCTTTTACATTCCACTAATAAAGATT 180
consensus_1208#1 TGGAGTTAGATCCTCAATTTACACAGGGTTTACATCTTTTACATTCCACTAATAAAGATT 154
************************************************************
consensus_1208#0 CTGCAGAACAATTACGAGCTCTTCTAGATGAAGCAATCAAACAAAAGTATGGACCATCAA 240
consensus_1208#1 CTGCAGAACAATTACGAGCTCTTCTAGATGAAGCAATCAAACAAAAGTATGGACCATCAA 214
************************************************************
consensus_1208#0 AAATGTTATCGAATGTACTACACAAAAAGTATATGATGGAGGAACCAGTACTAAGTGACC 300
consensus_1208#1 AAATGTTATCGAATGTACTACACAAAAAGGTAATTAGATAATAACTAATTTAAACACATT 274
***************************** ** * * *** * * ** *
consensus_1208#0 ATAGCAGCAGTAGTAAAAAGAGCAAAAGCTCCTCTTCTTCTTCTTCCAAACATTCAAGTA 360
consensus_1208#1 ATTTTGAGGGTTATCAAGAAAAAAAGAGTAAATCAAAGTGTTTTAT--ATTAATTAAGTT 332
** ** * ** * * ** ** ** * ** * * * * ****
consensus_1208#0 AATCAAGCAAAAACAATTCTCCTGTAAATTTACCAACTCGTGACACACCACCTGATATTA 420
consensus_1208#1 A-TTATACTTACAGAATTAGTTCTGATATCAGGGCACTCATGAAGCAT-AGGAGATTTCA 390
* * * * * * **** * ** **** *** ** * *** * *
consensus_1208#0 TTCAGACTGATAATACTTTAGCATTAGAAATATTAGAAGATGATCTGACATGTGTAATTT 480
consensus_1208#1 TTCACGTAAAAAGATATCCAGTATTTGATCCCTCTGTA--TGCACCATCATTATCATTCA 448
**** * * * ** *** ** * * * ** * *** * *
consensus_1208#0 GCAAAGGAATGGATGTTGGTGCAAGAAACAGACTTGTTGAATGTTTAGAATGTCATTCCT 540
consensus_1208#1 TTTTTTGAAT-------------------------------------------------- 458
****
consensus_1208#0 TATATCACCAAGAATGTCATGTTCCACATATTTTAGATTCTCAAATAGATGTGCCAGGAT 600
consensus_1208#1 ------------------------------------------------------------
consensus_1208#0 TGGTGTGGTATTGTTCAAACTGTTCCAAATCTCAGGGTTTCAAAAGAAAGGAGTTCACCA 660
consensus_1208#1 ------------------------------------------------------------
consensus_1208#0 AAAACAGTGATAGAAAATAAATCTAAAGAACAAAAAAAATCCAATTTAAGTGGTGGAAAC 720
consensus_1208#1 ------------------------------------------------------------
consensus_1208#0 AAAATAACACCAAATATTCATATTATA 747
consensus_1208#1 ---------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |