These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1482#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence [TATTTAAAATATTTATTATAATATAGGAAAAGAAATAGGTTTACTTCATACAAACAGTTCAGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCNNNGCTGTTTATTCAACAGATAAAGCTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTATCACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGTCCTAGAATTTCTGCTATTTTATGGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGGATGTTAGGGTATATAATATATTTATTATTATTATATAATTATATAAAGATTAAATATTAAAACTTCTGATAATTATATTTCTTTATAGACAAGAAAAAAATTGACAAGTGTTAAAGGTCATAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATCAAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAAAACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGT] [+] EMBL BI506079 [TATTTAAAATATTTATTATAATATAGGAAAAGAAATAGGTTTACTTCATACAAACAGTTCAGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCNNNGCTGTTTATTCAACAGATAAAGCTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTATCACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGTCCTAGAATTTCTGCTATTTTATGGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGGATGTTAGGGTATATAATATATTTATTATTATTATATAATTATATAAAGATTAAATATTAAAACTTCTGATAATTATATTTCTTTATAGACAAGAAAAAAATTGACAAGTGTTAAAGGTCATAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATCAAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAAAACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGT] consensusID : consensus_1482#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence [GGAAAAGAAATAGGTTTACTTCATACAAACAGTTCAGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCTTGCTGTTTATTCAACAGATAAAGCTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTATCACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGCCCTAGAATTTCTGCTATTTTATGGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGGATGTTAGGACAAGAAAAAAATTGACAAGTGTTAAAGGTCATAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATCAAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAAAACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGTCGTTCTTGGAGGNNGTCAAGATGCTATGGATGTCACAACAACATCAACTCGTCAAGGAAAATTCGATT] [+] EMBL BI508951 [GGAAAAGAAATAGGTTTACTTCATACAAACAGTTCAGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCTTGCTGTTTATTCAACAGATAAAGCTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTATCACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGCCCTAGAATTTCTGCTATTTTATGGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGGATGTTAGGACAAGAAAAAAATTGACAAGTGTTAAAGGTCATAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATCAAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAAAACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGTCGTTCTTGGAGGNNGTCAAGATGCTATGGATGTCACAACAACATCAACTCGTCAAGGAAAATTCGATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1482#0 TATTTAAAATATTTATTATAATATAGGAAAAGAAATAGGTTTACTTCATACAAACAGTTC 60 consensus_1482#1 -------------------------GGAAAAGAAATAGGTTTACTTCATACAAACAGTTC 35 *********************************** consensus_1482#0 AGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCNNNGCTGTTTATTCAACAGATAAAG 120 consensus_1482#1 AGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCTTG-CTGTTTATTCAACAGATAAAG 94 *********************************** ********************* consensus_1482#0 CTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTAT 180 consensus_1482#1 CTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTAT 154 ************************************************************ consensus_1482#0 CACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGTCCTAGAATTTCTGCTATTTTAT 240 consensus_1482#1 CACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGCCCTAGAATTTCTGCTATTTTAT 214 ************************************* ********************** consensus_1482#0 GGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGG 300 consensus_1482#1 GGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGG 274 ************************************************************ consensus_1482#0 ATGTTAGGGTATATAATATATTTATTATTATTATATAATTATATAAAGATTAAATATTAA 360 consensus_1482#1 ATGTTAGG---------------------------------------------------- 282 ******** consensus_1482#0 AACTTCTGATAATTATATTTCTTTATAGACAAGAAAAAAATTGACAAGTGTTAAAGGTCA 420 consensus_1482#1 ----------------------------ACAAGAAAAAAATTGACAAGTGTTAAAGGTCA 314 ******************************** consensus_1482#0 TAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATC 480 consensus_1482#1 TAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATC 374 ************************************************************ consensus_1482#0 AAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAA 540 consensus_1482#1 AAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAA 434 ************************************************************ consensus_1482#0 AACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGT--------- 591 consensus_1482#1 AACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGTCGTTCTTGG 494 *************************************************** consensus_1482#0 ----------------------------------------------------------- consensus_1482#1 AGGNNGTCAAGATGCTATGGATGTCACAACAACATCAACTCGTCAAGGAAAATTCGATT 553 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |