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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_152#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1291 fasta sequence
[CGGGCGAGTTTAACAGCTTTCAGAGTCCGACGTTGGAGACGGAGACGCAACAAGAGCCGAACGCGGCGAAATCGGCCGTTGGAAACGCGACACGTGCCAAAACAGAGATGTGCGGTAAAAAAGTGTTCTCCGCCACGCCCACGGATTTTTCCGAGGCCGAGACGTCGTCTTCCGGCTTTTTGGACGAGACGAGTAACAAAGCGACGCAAACCGAAGGAAGGCCCGGCTCGTTTCTTTTCTCCTTCGCGGACGGCGAGGATTGCAAGTTCAGCATTTACGACGACAACAGCCCGTTCGAGAGTAGATTCCGGAAAACGCCGGAGTACAGACAATTGTTCAGTGAAATATTCCGAGTCTTGAAACGAGCGGCGGAAGCTAAGGACGAAGGCGAGAAATTACCTTTATTGGACGATTCCACGAGTACGAACAATTCTCAGCAACAATCCGTGCTACAAGAAGATGTTCCTAGCGAAACCACCGACGATAATCAAAGCGTTTCCTCTTCTATTTTTTCATCCGCCGTATCCGAACCACCGTACATAGTACAAATCTCATCGAACGGGGTAAACGAACAGCAAAACGGTGAAGTGACACTTGCTAAGAACGGGAAGAATATAATTCGAAACGTGAATCGGTCGGATTATTTAATGCTCAACAGTAAAAAGAAATCGAAAAAACATTCTTCCGCTAGTAAAAAGTTAACGTATAACGATATTAGACCAACGACGCCCGATGTGATTCCAACGACAAATCCCAAGTTCGTTCCATCGAAATCGAACAGCGGAGGAAAGAAGAAATTCAGACCTTTCACGATCGCCGATCAAAATGGCGGCACGTGCAACGGGTACGCTTATCCGAACAAAACGAAAGACTCGCCTCCTAATTCGGCCGCAAAATCTTCGAATAACGCAGGCAACAACAGTAGTCAACACAACAACAGTTTCGAGTACAGAGACTATAAACCGAGCACAGCGTCGGTCGAAGTAGCCCGGCTAAAACGTTTAGAAATGTCTTATGCGGAAGTTCTACGGTTGCCAAATAAATCTAAAATGAACAATCATCGTAGAAGCTAAAATCTTCTT--TATATATATATATATATACTACGATACCTTGAAGNAGGGGAAAAAAAGGAGACTTTTATACGTAAGATATAGTCAAGTGAAAGATTAAGTTCAAAATTTGTTAAGTTGTTAACCTCGTAAAACGAATACTTAGGACGGAATTAAATTATTTCACAGAAGTAAGATTCACAGTATTGATAATCAGTGCTAACGGAACAAATTTTGTGAAT]
[+] EMBL BI503052 [CGGGCGAGTTTAACAGCTTTCAGAGTCCGACGTTGGAGACGGAGACGCAACAAGAGCCGAACGCGGCGAAATCGGCCGTTGGAAACGCGACACGTGCCAAAACAGAGATGTGCGGTAAAAAAGTGTTCTCCGCCACGCCCACGGATTTTTCCGAGGCCGAGACGTCGTCTTCCGGCTTTTTGGACGAGACGAGTAACAAAGCGACGCAAACCGAAGGAAGGCCCGGCTCGTTTCTTTTCTCCTTCGCGGACGGCGAGGATTGCAAGTTCAGCATTTACGACGACAACAGCCCGTTCGAGAGTAGATTCCGGAAAACGCCGGAGTACAGACAATTGTTCAGTGAAATATTCCGAGTCTTGAAACGAGCGGCGGAAGCTAAGGACGAAGGCGAGAAATTACCTTTATTGGACGATTCCACGAGTACGAACAATTCTCAGCAACAATCCGTGCTACAAGAAGATGTTCCTAGCGAAACCACCGACGATAATCAAAGCGTTTCCTCTTCTATTTTTTCATCCGCCGTATCCGAACCACCGTACATAGTACAAATCTCATCGAACGGGGTA ]
[+] EMBL BI508910 [ TTGGAAACGCGACACGTGCCAAAACAGAGATGTGCGGTAAAAAAGTGTTCTCCGCCACGCCCACGGATTTTTCCGAGGCCGAGACGTCGTCTTCCGGCTTTTTGGACGAGACGAGTAACAAAGCGACGCAAACCGAAGGAAGGCCCGGCTCGTTTCTTTTCTCCTTCGCGGACGGCGAGGATTGCAAGTTCAGCATTTACGACGACAACAGCCCGTTCGAGAGTAGATTCCGGAAAACGCCGGAGTACAGACAATTGTTCAGTGAAATATTCCGAGTCTTGAAACGAGCGGCGGAAGCTAAGGACGAAGGCGAGAAATTACCTTTATTGGACGATTCCACGAGTACGAACAATTCTCAGCAACAATCCGTGCTACAAGAAGATGTTCCTAGCGAAACCACCGACGATAATCAAAGCGTTTCCTCTTCTATTTTTTCATCCGCCGTATCCGAACCACCGTACATAGTACAAATCTCATCGAACGGGGTAAACGAACAGCAAAACGGTGAAGTGACACTTGCTAAGAACGGGAAGAATATAATTCGAAACGTGAATCGGTCGGATTATTTAATGCTCAACAGTAAAAAGAAATCGAAAAAACATTCTTCCGCTAGT ]
[+] EMBL BI509734 [ AACGCCGGAGTACAGACAATTGTTCAGTGAAATATTCCGAGTCTTGAAACGAGCGGCGGAAGCTAAGGACGAAGGCGAGAAATTACCTTTATTGGACGATTCCACGAGTACGAACAATTCTCAGCAACAATCCGTGCTACAAGAAGATGTTCCTAGCGAAACCACCGACGATAATCAAAGCGTTTCCTCTTCTATTTTTTCATCCGCCGTATCCGAACCACCGTATATAGTACAAATCTCATCGAACGGGGTAAACGAACAGCAAAACGGTGAAGTGACACTTGCTAAGAACGGGAAGAATATAATTCGAAACGTGAATCGGTCGGATTATTTAATGCTCAACAGTAAAAAGAAATCGAAAAAACATTCTTCCGCTAGTAAAAAGTTAACGTATAACGATATTAGACCAACGACGCCCGATGTGATTCCAACGACAAATCCCAAGTTCGTTCCATCGAAATCGAACAGCGGAGGAAAGAAGAAATTCAGACCTTTCACGA ]
[+] EMBL BI507820 [ GGATTATTTAATGCTCAACAGTAAAAAGAAATCGAAAAAACATTCTTCCGCTAGTAAAAAGTTAACGTATAACGATATTAGACCAACGACGCCCGATGTGATTCCAACGACAAATCCCAAGTTCGTTCCATCGAAATCGAACAGCGGAGGAAAGAAGAAATTCAGACCTTTCACGATCGCCGATCAAAATGGCGGCACGTGCAACGGGTACGCTTATCCGAACAAAACGAAAGACTCGCCTCCTAATTCGGCCGCAAAATCTTCGAATAACGCAGGCAACAACAGTAGTCAACACAACAACAGTTTCGAGTACAGAGACTATAAACCGAGCACAGCGTCGGTCGAAGTAGCCCGGCTAAAACGTTTAGAAATGTCTTATGCGGAAGTTCTACGGTTGCCAAATAAATCTAAAATGAACAATCATCGTAGAAGCTAAAATCTTCTT TATATATATATATATATACTACGATACCTTGAAGNAGGGGAAAAAAAGGAGACTTTTATACGTAAGATATAGTCAAGTGAAA ]
[+] EMBL BI505069 [ AACGACAAATCCCAAGTTCGTTCCATCGAAATCGAACAGCGGAGGAAAGAAGAAATTCAGACCTTTCACGATCGCCGATCAAAATGGCGGCACGTGCAACGGGTACGCTTATCCGAACAAAACGAAAGACTCGCCTCCTAATTCGGCCGCAAAATCTTCGAATAACGCAGGCAACAACAGTAGTCAACACAACAACAGTTTCGAGTACAGAGACTATAAACCGAGCACAGCGTCGGTCGAAGTAGCCCGGCTAAAACGTTTAGAAATGTCTTATGCGGAAGTTCTACGGTTGCCAAATAAATCTAAAATGAACAATCATCGTAGAAGCTAAAATCTTCTTTATATATATATATATATATACTACGATACCTTGAAGGAGGGGAAAAAAAGGAGACTTTTATACGTAAGATATAGTCAAGTGAAAGATTAAGTTCAAAATTTGTTAAGTTGTTAACCTCGTAAAACGAATACTTAGGACGGAATTAAATTATTTCACAGAAGTAAGATTCACAGTATTGATAATCAGTGCTAACGGAACAAATTTTGTGAAT]
consensusID : consensus_152#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence
[CGCGATTGAAAATTTACGAGCAACTGGAAGTCAGTATTCAAGATTTGGAACGCGCGAATCATCGTCTAGTAATCGAGAACACCAGCGACAAAAAATTGATCAAGAGTCAATGTTTGACGATCGAGAGCCTAGAGGCGAGGTGCGAGGAACTTCAGAAGAAAATCGACGAGATAAACGAGCAACATGAAAGTCTGCTCCGGCAACAATCTACGAGTCAATCGGCTAACAATATCACACAAACACACACCATTCATTGGAAAGTATCGGTCACGCAGGGTAGCAGCACACAACAGAACGCTGCTCCGTCTGGTCAGAAATCTTTCCAAGAGGCAAATGCGGACTCGAGCGTGCGACAATTACCGACGATTCCGACGAACGACGAAGAAGTTACCGAATTGTTGAGACAGTTGCAAGNGNCGCGAAATTCAGNCCTTTCACGATCGCCGATCAAAATGGCGGCACGTGCAACGGGTACGCTTA]
[+] EMBL BI516400 [CGCGATTGAAAATTTACGAGCAACTGGAAGTCAGTATTCAAGATTTGGAACGCGCGAATCATCGTCTAGTAATCGAGAACACCAGCGACAAAAAATTGATCAAGAGTCAATGTTTGACGATCGAGAGCCTAGAGGCGAGGTGCGAGGAACTTCAGAAGAAAATCGACGAGATAAACGAGCAACATGAAAGTCTGCTCCGGCAACAATCTACGAGTCAATCGGCTAACAATATCACACAAACACACACCATTCATTGGAAAGTATCGGTCACGCAGGGTAGCAGCACACAACAGAACGCTGCTCCGTCTGGTCAGAAATCTTTCCAAGAGGCAAATGCGGACTCGAGCGTGCGACAATTACCGACGATTCCGACGAACGACGAAGAAGTTACCGAATTGTTGAGACAGTTGCAAGNGNCGCGAAATTCAGNCCTTTCACGATCGCCGATCAAAATGGCGGCACGTGCAACGGGTACGCTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_152#0 CGGGCGAGTTTAACAGCTTTCAGAGTCCGACGTTGGAGACGGAGACGCAACAAGAGCCGA 60
consensus_152#1 ------------------------------------------------------------
consensus_152#0 ACGCGGCGAAATCGGCCGTTGGAAACGCGACACGTGCCAAAACAGAGATGTGCGGTAAAA 120
consensus_152#1 ------------------------------------------------------------
consensus_152#0 AAGTGTTCTCCGCCACGCCCACGGATTTTTCCGAGGCCGAGACGTCGTCTTCCGGCTTTT 180
consensus_152#1 ------------------------------------------------------------
consensus_152#0 TGGACGAGACGAGTAACAAAGCGACGCAAACCGAAGGAAGGCCCGGCTCGTTTCTTTTCT 240
consensus_152#1 ------------------------------------------------------------
consensus_152#0 CCTTCGCGGACGGCGAGGATTGCAAGTTCAGCATTTACGACGACAACAGCCCGTTCGAGA 300
consensus_152#1 ------------------------------------------------------------
consensus_152#0 GTAGATTCCGGAAAACGCCGGAGTACAGACAATTGTTCAGTGAAATATTCCGAGT--CTT 358
consensus_152#1 ----------------------------------CGCGATTGAAAATTTACGAGCAACTG 26
* ***** ** **** **
consensus_152#0 GAAACGAGCGGCGGAAGCTAAGGACGAAGGCGAGAAATTACCTTTATTGGACGATTCCAC 418
consensus_152#1 GAAGTCAGTATTCAAGATTTGGAAC----GCGCGAATCATCGTCTAGTAATCGAGAACAC 82
*** ** * * * ** *** *** * * ** * *** ***
consensus_152#0 GAGTACGAACAATTCTCAGCAACAATCCGTGCTACAAGAAGATGTTCCTAGCGAAACCAC 478
consensus_152#1 CAGCGACAAAAAAT-TGATCAAGAGTCAATGTTTGACGATCGAGAGCCTAGAGGCGAGGT 141
** ** ** * * * *** * ** ** * * ** * ***** *
consensus_152#0 -CGACGATAATCAAAGCGTTTCCTCTTCTATTTTTTCATCCGCCGTATCCGAACCACCGT 537
consensus_152#1 GCGAGGAACTTCAGAAGAAAATCGACGAGAT------AAACGAGCAACATGAAAGTCTGC 195
*** ** *** * * ** * ** * *** * *
consensus_152#0 ACATAGTACAAATCTCATCGAACGGGGTAAACGAACAGCAAAACGGTGAAGTGACACTTG 597
consensus_152#1 TC-CGGCAACAATCT------ACGAGTCAATCGGCTAACAATATCACACA--AACACACA 246
* * * ***** *** * ** ** * *** * * ****
consensus_152#0 CTAAGAACGGGAAGAATATAATTCGAAACGTGAATCGGTCGGATTATTTAATGCTCAACA 657
consensus_152#1 CCATTCATTGGAA-AGTATCGGTCACGCAGGGTAGCAG-CACACAACAGAACGCTGCTCC 304
* * * **** * *** ** * * * * * * * * ** *** *
consensus_152#0 GTAAAAAGAAATCGAAAAAACATTCTTCCGCTAGTAAAAAGTTAACGTATAACGATATTA 717
consensus_152#1 GT---------CTGGTCAGAAATCTTTCC------AAGAGGCAAATGCGGACTCGAGC-- 347
** * * * ** **** ** * * ** * *
consensus_152#0 GACCAACGACGCCCGATGTGATTCCAACGACAAATCCCAAGTTCGTTCCATCGAAATCGA 777
consensus_152#1 GTGCGACAATTACCGACG--ATTCCGACGAACGACGAAGAAGTTACCGAATTG--TTGAG 403
* * ** * **** * ***** **** * * * ** * *
consensus_152#0 ACAGCGG-AGGAAAGAAGAAATTCAGACCTTTCACGATCGCCGATCAAAATGGCGGCACG 836
consensus_152#1 ACAGTTGCAAGNGNCGCGAAATTCAGNCCTTTCACGATCGCCGATCAAAATGGCGGCACG 463
**** * * * ********* *********************************
consensus_152#0 TGCAACGGGTACGCTTATCCGAACAAAACGAAAGACTCGCCTCCTAATTCGGCCGCAAAA 896
consensus_152#1 TGCAACGGGTACGCTTA------------------------------------------- 480
*****************
consensus_152#0 TCTTCGAATAACGCAGGCAACAACAGTAGTCAACACAACAACAGTTTCGAGTACAGAGAC 956
consensus_152#1 ------------------------------------------------------------
consensus_152#0 TATAAACCGAGCACAGCGTCGGTCGAAGTAGCCCGGCTAAAACGTTTAGAAATGTCTTAT 1016
consensus_152#1 ------------------------------------------------------------
consensus_152#0 GCGGAAGTTCTACGGTTGCCAAATAAATCTAAAATGAACAATCATCGTAGAAGCTAAAAT 1076
consensus_152#1 ------------------------------------------------------------
consensus_152#0 CTTCTTTATATATATATATATATACTACGATACCTTGAAGNAGGGGAAAAAAAGGAGACT 1136
consensus_152#1 ------------------------------------------------------------
consensus_152#0 TTTATACGTAAGATATAGTCAAGTGAAAGATTAAGTTCAAAATTTGTTAAGTTGTTAACC 1196
consensus_152#1 ------------------------------------------------------------
consensus_152#0 TCGTAAAACGAATACTTAGGACGGAATTAAATTATTTCACAGAAGTAAGATTCACAGTAT 1256
consensus_152#1 ------------------------------------------------------------
consensus_152#0 TGATAATCAGTGCTAACGGAACAAATTTTGTGAAT 1291
consensus_152#1 -----------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |