These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1574#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence [TTGGATTTGGAATTTCTGGAGGTTCCCATTCTCCATCCATTTCAACATCCCAATCATCAGGTTTTACAGAATCAGGATTAGGTATCATTGGTGGTTCATCTTCAAGCCATCCTTCAGGCATAATATCATCTTCATCAACAATTTGTGCTGGAGCATCTTCATCCCAATCATCTGGTTTAATAGCTGATAGATCAGGAATTTTTTCTTTGTCATCCCAATCTTCTGGTTGAATATCAGTTGGATCTTCTATTTCCAAAGGTGGATTGACTGGTGGAGTAAAATCATCCAACAAGGATCCAGAATTTACTATTTTATTATCAATCTTAATTTCAAAACTATTATCTGGCCGAATGATCAAAGTATATAGATGAGGTTGCTTATCTTTGAAAAAATCTTCTAAACGCTCTCTTGGTTTTTTGCAATGCTTCTCTTCTATAGAACCATTTAAAGGATTTTTATGTCGAAAGATAAAATGTAGCTTATGATCATTTCCACATTTATCAGGACCAAACATTATAGTATAAGGAGTTTTATCATGGAATTTTTTTAAATCTTGATGTTCTGGATGTAAAGTAAGCAATTTTAAATAAGCTCCTCCACATTCTTGACTATCTTGAAAATTCACTTCATATTGTACAATTAATGGTTTATCATTGAAATAAAATGGTGTAAATAATTTAGTAGAT] [+] EMBL BI509107 [TTGGATTTGGAATTTCTGGAGGTTCCCATTCTCCATCCATTTCAACATCCCAATCATCAGGTTTTACAGAATCAGGATTAGGTATCATTGGTGGTTCATCTTCAAGCCATCCTTCAGGCATAATATCATCTTCATCAACAATTTGTGCTGGAGCATCTTCATCCCAATCATCTGGTTTAATAGCTGATAGATCAGGAATTTTTTCTTTGTCATCCCAATCTTCTGGTTGAATATCAGTTGGATCTTCTATTTCCAAAGGTGGATTGACTGGTGGAGTAAAATCATCCAACAAGGATCCAGAATTTACTATTTTATTATCAATCTTAATTTCAAAACTATTATCTGGCCGAATGATCAAAGTATATAGATGAGGTTGCTTATCTTTGAAAAAATCTTCTAAACGCTCTCTTGGTTTTTTGCAATGCTTCTCTTCTATAGAACCATTTAAAGGATTTTTATGTCGAAAGATAAAATGTAGCTTATGATCATTTCCACATTTATCAGGACCAAACATTATAGTATAAGGAGTTTTATCATGGAATTTTTTTAAATCTTGATGTTCTGGATGTAAAGTAAGCAATTTTAAATAAGCTCCTCCACATTCTTGACTATCTTGAAAATTCACTTCATATTGTACAATTAATGGTTTATCATTGAAATAAAATGGTGTAAATAATTTAGTAGAT] consensusID : consensus_1574#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence [TACCTAATCCTGATTCTGTAAAACCTGATGATTGGGATGTTGAAATGGATGGAGAATGGGAACCTCCAGAAATTCCAAATCCAAAATGTGCTGATGCACCTGGATGTGGATTATATAAGCAAAAAATGAAAAAAAATCCTCGCTATAAAGGCAAATGGTCACCACCTTTGATTAATAATCCAAATTATAAAGGCAAATGGAAGCCAAAATTAATACATAATCCTAATTATTTTAATGATGAACATCCATTCCAAATGATGCCTATCTTTGCTGTAGGCTTTGAACTTTGGTCAATGTCTACAGACATCCTCTTTGACAATATTATTATTACTCATGATGAAGAAGTAGCAAAATATTGGGCTGATAATACATTTGAAGTTCGTCGCGCTCAAATTGCAGAGGAAAGTTGGAGTGTATGGCGTCAAATTGGTACATTTACTGCAGAACATCCTTGGATATGGGGTATATATATAATAGCTCCTGGCTTGCCCATATTGCTAGTAATATATTGTTGCTGCTTTGCTTCTCAGGATAAATATGATTTAAAAGATGATGATAAACAATCTTTAGTGACAAATGAACAAGT] [+] EMBL BI505780 [TACCTAATCCTGATTCTGTAAAACCTGATGATTGGGATGTTGAAATGGATGGAGAATGGGAACCTCCAGAAATTCCAAATCCAAAATGTGCTGATGCACCTGGATGTGGATTATATAAGCAAAAAATGAAAAAAAATCCTCGCTATAAAGGCAAATGGTCACCACCTTTGATTAATAATCCAAATTATAAAGGCAAATGGAAGCCAAAATTAATACATAATCCTAATTATTTTAATGATGAACATCCATTCCAAATGATGCCTATCTTTGCTGTAGGCTTTGAACTTTGGTCAATGTCTACAGACATCCTCTTTGACAATATTATTATTACTCATGATGAAGAAGTAGCAAAATATTGGGCTGATAATACATTTGAAGTTCGTCGCGCTCAAATTGCAGAGGAAAGTTGGAGTGTATGGCGTCAAATTGGTACATTTACTGCAGAACATCCTTGGATATGGGGTATATATATAATAGCTCCTGGCTTGCCCATATTGCTAGTAATATATTGTTGCTGCTTTGCTTCTCAGGATAAATATGATTTAAAAGATGATGATAAACAATCTTTAGTGACAAATGAACAAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1574#0 TTGGATTTGGAATTTCTGGAGGTTCCCATTCTCCATCCATTTCAACATCCCAATCATCAG 60 consensus_1574#1 ----------------------TACCTAATCCTGATTCTGTAAAACCTGATGATTGGGAT 38 * ** * ** ** * * *** * ** * consensus_1574#0 GTTTTACAGAATCAGGATTAGGTATCATTGGTGGTTC-ATCTTCAAGCCATCCT--TCAG 117 consensus_1574#1 GTTGAAATGGATGGAGAATGGGAACCTCCAGAAATTCCAAATCCAAAATGTGCTGATGCA 98 *** * * ** ** * ** * * * *** * * *** * ** * consensus_1574#0 GCATAATATCATCTTCATCAACAATTTGTGCTGGAGCATCTTCATCCCAATCATCTGGTT 177 consensus_1574#1 CCTGGATGTGGATTATATAAGCAAAAAATGAAAAAAAATCCTCGC-------------TA 145 * ** * * ** * *** ** * *** ** * consensus_1574#0 TAATAGCTGATAGATCAGGAATTTTTTCTTTGTCATCCCAATCTTCTGGTTGAATATCAG 237 consensus_1574#1 TAAAGGCAAATGG-TCACCA-CCTTTGATTAATAATCCAAATTATAAAGGCAAATGGAAG 203 *** ** ** * *** * *** ** * **** *** * * *** ** consensus_1574#0 TTGGATCTTCTATTTCCAAAGGTGGATTGACTGGTGGAGTAAAATCATCCAACAAGGATC 297 consensus_1574#1 CCAAAATTAATACAT--AATCCTAATTATTTTAATGATGAACATCCATTCCAAATGATGC 261 * * ** * ** * * * ** * * * *** * * * * * consensus_1574#0 CAGAATTTACTATTTTATTATCAATCTTAATTTCAAAACTATTATCTGGCCGAATGATCA 357 consensus_1574#1 CTATCTTTGCTGTAGGCTT--TGAACTTTGGTCAATGTCTACAGACATCCTCTTTGACAA 319 * *** ** * ** * *** * * *** * * *** * consensus_1574#0 AAGTAT-ATAGATGAGGTTGCTTATCTTTGAAAAAATCTTCTAAACGCTCTCTTGGTTTT 416 consensus_1574#1 TATTATTATTACTCATGATGAAGAAGTAGCAAAATATTGGGCTGATAATACATTTGAAGT 379 * *** ** * * * ** * * **** ** * * ** * * consensus_1574#0 TTGCAATGCTTCTCTTCTATAGAACCATTTAAAGGATTTTTATGTCGAAAGATAAAATGT 476 consensus_1574#1 TCGTCGCGCTCAAATTGCAGAGGAAAGTTGGAGTG--TATGGCGTCAAATTGGTACATTT 437 * * *** ** * ** * ** * * * * *** ** * ** * consensus_1574#0 AGCTTATGATCATTTCCACATTTATCAGGACCAAACATTATAGTATAAGGAGTTTTATCA 536 consensus_1574#1 A-CTGCAGAACATCCTTGGAT--ATGGGGTATATATATAATAGCTCCTGGCTTGCCCATA 494 * ** ** *** ** ** ** * * ** **** ** * * consensus_1574#0 TGGAATTTTTTTAAATCTTGATGTTCTGGATGTAAAG-TAAGCA--ATTTTAAATAAGCT 593 consensus_1574#1 TTGCTAGTAATATATTGTTGCTGCTTTGCTTCTCAGGATAAATATGATTTAAAAGATGAT 554 * * * * * * *** ** * ** * * * * *** * **** *** * * * consensus_1574#0 CCTCCACATTCTTGACTATCTTGAAAATTCACTTCATATTGTACAATTAATGGTTTATCA 653 consensus_1574#1 GATAAACAATCTTTAGTGACAAATGAACAAGT---------------------------- 586 * *** **** * * * ** consensus_1574#0 TTGAAATAAAATGGTGTAAATAATTTAGTAGAT 686 consensus_1574#1 --------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |