These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1637#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 494 fasta sequence [AAGGAAAAAAAAAAAAGAAATGATGAAAGAATCGAAAAAATGAGGATATAAATAAAAGGTAACTCTAATGATGATTCTATTTATATAACACTTGTTCGCGGTGCGTGGTTACCTCGTCTCGAATCCGACGATCGACGGACGGTGGAAACGAGCGGCGGAGAGAGAGAGAGAGAGAAAGGGAGAGAAAGAGAGAGAGAGAAAGAGTTTAAGTTAAGAGTAGAAAAATGACGATATCGTCGCATCGTAAGAAAGAAAGAAAAAGAGAACGCTCGCGTGCACGGTTGGTAAAACAGGAGGCGAANNNNNTGGCGACCGGGAACGGGAGAAAATCGTTGCGGTTCAATCACGTGGGAGATGTATGTGGAAAATATCGGGAGAAACTGCGGGAAAGGGGTGAAAGAACGCGATGAGAGAACCGATATGTACGATAATTCTGTAAATACGACTCTAATTGCGATTTATTATTGATTAATTACGCTCGCGATCGCGGACGA] [+] EMBL BI513779 [AAGGAAAAAAAAAAAAGAAATGATGAAAGAATCGAAAAAATGAGGATATAAATAAAAGGTAACTCTAATGATGATTCTATTTATATAACACTTGTTCGCGGTGCGTGGTTACCTCGTCTCGAATCCGACGATCGACGGACGGTGGAAACGAGCGGCGGAGAGAGAGAGAGAGAGAAAGGGAGAGAAAGAGAGAGAGAGAAAGAGTTTAAGTTAAGAGTAGAAAAATGACGATATCGTCGCATCGTAAGAAAGAAAGAAAAAGAGAACGCTCGCGTGCACGGTTGGTAAAACAGGAGGCGAANNNNNTGGCGACCGGGAACGGGAGAAAATCGTTGCGGTTCAATCACGTGGGAGATGTATGTGGAAAATATCGGGAGAAACTGCGGGAAAGGGGTGAAAGAACGCGATGAGAGAACCGATATGTACGATAATTCTGTAAATACGACTCTAATTGCGATTTATTATTGATTAATTACGCTCGCGATCGCGGACGA] consensusID : consensus_1637#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 451 fasta sequence [TCGCGCGCGCGAGTTTTAAATCGAATAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAATGATGCATGGATAATGTACGAGCGTCGAGTTTTCATGGAAGTTTCCTCGTCCACCTCGATATTTCACGACACCGCGATCGAAAATTCTTGGGATGGAAGGATGGAGAGGAAGATGATGATGTCAATGTATGTTGTGTCACGCGCACGTCGAGCGTCGAGCTGGAAATTAATGATGTCCAGTTAAAATGAGAAAATTAAGTAATTCAACTAGAAACAGGCCGAAGATTATAAAATAGATGGAAAAGTTTTCGAACGAAGATACCCCAATAGTTGTGAGCGATATAATGAACGAGCCAAGTTTTCCAAACGGTCGAGAAAGTCGATAAAATGGAAAATGACGATATCGTCGCATCGTAAGAAAGAAAGAAAAAGAGAACGCTCGCGTGCACGGTT] [+] EMBL BI510157 [TCGCGCGCGCGAGTTTTAAATCGAATAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAATGATGCATGGATAATGTACGAGCGTCGAGTTTTCATGGAAGTTTCCTCGTCCACCTCGATATTTCACGACACCGCGATCGAAAATTCTTGGGATGGAAGGATGGAGAGGAAGATGATGATGTCAATGTATGTTGTGTCACGCGCACGTCGAGCGTCGAGCTGGAAATTAATGATGTCCAGTTAAAATGAGAAAATTAAGTAATTCAACTAGAAACAGGCCGAAGATTATAAAATAGATGGAAAAGTTTTCGAACGAAGATACCCCAATAGTTGTGAGCGATATAATGAACGAGCCAAGTTTTCCAAACGGTCGAGAAAGTCGATAAAATGGAAAATGACGATATCGTCGCATCGTAAGAAAGAAAGAAAAAGAGAACGCTCGCGTGCACGGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1637#0 AAGGAAAAAAAAAAAAGAAATGATGAAAGAATCGAAAAAATGAGGATATAAATAAAAGGT 60 consensus_1637#1 TCGCGCGCGCGAGTTTTAAATCGAATAAAAAACAAAAAAA-AAAAAAAAAAAAAAAAAAT 59 * * **** ** ** * ****** * * * *** **** * consensus_1637#0 AACTCTAATGATGATTCTATTTATATAACACTTGTTCGCGGTGCGTGGTTACCTCGTCTC 120 consensus_1637#1 GATGC--ATG--GATAATGTACGAGCGTCGAGTTTTCATGGAAGTTTCCTCGTCCACCTC 115 * * *** *** * * * * *** ** * * * *** consensus_1637#0 GA-ATCCGACGATCGACGGACGGTGGAAACGAGCGGCGGAGAGAGAGAGAGAGAGAAAGG 179 consensus_1637#1 GATATTTCACGACACCGCGATCGAAAATTCTTGGGATGGAAGGATGGAGAGGAAGATGAT 175 ** ** **** ** * * * * * *** ** ***** *** consensus_1637#0 GAGAGAAAGAGAGAGAGAGAAAGAGTTTAAGTTAAGAGTAGAAAAATGACGATATCGTCG 239 consensus_1637#1 GATGTCAATGTATGTTGTGTCAC-GCGCACGTCGAGCGTCGAGCTG-GAAATTAATGATG 233 ** ** * * * * * * ** ** ** ** ** ** * * consensus_1637#0 CATCGTAAGAAAGAAAGAAAAAGAGAACGCTCGCGTGCACGGTTGGTAAAACAGGAGGCG 299 consensus_1637#1 TCCAGTTAAAATGAGAAAATTAAGTAATTCAACTAGAAACAGGCCGAAGATTATAAAATA 293 ** * ** ** * ** * ** * ** * * * * * * consensus_1637#0 AANNNNNTGGCGACCGGGAACGGGAGAAAATCGTTGCGGTTCAATCACGTGGGAGATGTA 359 consensus_1637#1 GATGGAAAAGTTTTCG--AACGAAGATACCCCAATAGTTGTGAGCGATATA----ATGAA 347 * * ** **** * * * * * * * *** * consensus_1637#0 TGTGGAAAATATCGGGAGAAACTGCGGGAAAGGGGTGAAA--GAACGCGATGAGAGAACC 417 consensus_1637#1 CGAGCCAAGTTTTCCAAACGGTCG-AGAAAGTCGATAAAATGGAAAATGACGATATCGTC 406 * * ** * * * * * ** * * *** *** ** ** * * consensus_1637#0 GATATGTACGATAATTCTGTAAATACGACTCTAATTGCGATTTATTATTGATTAATTACG 477 consensus_1637#1 GCATCGTAAGAAAGAAAGAAAAAGAGAACGCTCGC-GTGCACGGTT-------------- 451 * *** ** * *** * ** ** * * ** consensus_1637#0 CTCGCGATCGCGGACGA 494 consensus_1637#1 ----------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |