These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1921#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 475 fasta sequence [CTGGTGGTTCTGGATTAGGAGGTCCTTTGAGATACCGCAATGCCATTCTATTATGGATCAATTGTGACATGAAAGTCCTCGAGGATCGGTTGGAGAGAAGGGTCGACGACATGGTGGAGACCGGTCTGGTTCAGGAACTGCTTGACTTTCATCGGAGATACAACAAGCAACGGATTAAATCCAACACATCAGTCGATTATACGAAGGGCATTTTTCAAAGTATCGGCTTCAAAGAGTTTCATGATTACCTTGTGTTGCCAGAAGAAGAGAAGGGAGGGAAAAAAGGACAAGAATTATTGCAAAGGGGTATTGATGACTTAAAAATGGTCACGAAGAGGTACGCGAAAAAACAGAAAAAATGGGTTATGAATCGTCTACTTCGTCGCAGTGACAGACAAGTACCACCAATTTATGTATTAGATTCTACCGATGTGAATCAATGGGACAGTTGTGTATATGAACCAGCTGTGGCAAT] [+] EMBL BI514586 [CTGGTGGTTCTGGATTAGGAGGTCCTTTGAGATACCGCAATGCCATTCTATTATGGATCAATTGTGACATGAAAGTCCTCGAGGATCGGTTGGAGAGAAGGGTCGACGACATGGTGGAGACCGGTCTGGTTCAGGAACTGCTTGACTTTCATCGGAGATACAACAAGCAACGGATTAAATCCAACACATCAGTCGATTATACGAAGGGCATTTTTCAAAGTATCGGCTTCAAAGAGTTTCATGATTACCTTGTGTTGCCAGAAGAAGAGAAGGGAGGGAAAAAAGGACAAGAATTATTGCAAAGGGGTATTGATGACTTAAAAATGGTCACGAAGAGGTACGCGAAAAAACAGAAAAAATGGGTTATGAATCGTCTACTTCGTCGCAGTGACAGACAAGTACCACCAATTTATGTATTAGATTCTACCGATGTGAATCAATGGGACAGTTGTGTATATGAACCAGCTGTGGCAAT] consensusID : consensus_1921#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 327 fasta sequence [CTTTTTTCTTTTTTCAATTCTTTTATGCTTTGTACTTTTTAAATGAATGTTCCATTGAAATTCTCCAATAAATATCCTATCGCAAATATCACAAAAGTGTCTTTCCTCGTTGCTACTATCACTGAATTTTTTATTCTCTATTGATTCGTTTAAAGGTTTTTGTTCAGGCTTTTCTCCTCTTAGCACAGCTTCGATTATTGCCACAGCTGGTTCATATACACAACTGTCCCATTGATTCACATCGGTAGAATCTAATACATAAATTGGTGGTACCTGTAATCATTTTAAGTTAAAATAATTTTATGTTATGGAAATAAAAAAAAAAAA] [+] EMBL BI516042 [CTTTTTTCTTTTTTCAATTCTTTTATGCTTTGTACTTTTTAAATGAATGTTCCATTGAAATTCTCCAATAAATATCCTATCGCAAATATCACAAAAGTGTCTTTCCTCGTTGCTACTATCACTGAATTTTTTATTCTCTATTGATTCGTTTAAAGGTTTTTGTTCAGGCTTTTCTCCTCTTAGCACAGCTTCGATTATTGCCACAGCTGGTTCATATACACAACTGTCCCATTGATTCACATCGGTAGAATCTAATACATAAATTGGTGGTACCTGTAATCATTTTAAGTTAAAATAATTTTATGTTATGGAAATAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1921#0 CTGGTGGTTCTGGATTAGGAGGTCCTTTGAGATACCGCAATGCCATTCTATTATGGATCA 60 consensus_1921#1 -----------------------CTTTTTTCTTTTTTCAATTCTTTTATGCTTTG---TA 34 * *** * **** * ** * * ** * consensus_1921#0 ATTGTGACATGAAAGTCCTCGAGGATCGGTTGGAGAGAAGGGTCGACG-ACATGGTGGAG 119 consensus_1921#1 CTTTTTAAATGAATGTTCCATTGAAATTCTCCAATAAATATCCTATCGCAAATATCACAA 94 ** * * ***** ** * * * * * * * ** * ** * consensus_1921#0 ACCGGTCTGGTTCAGGAACTGCTTGACTTTCATCGGAGATACAACAAGCAACGGATTAAA 179 consensus_1921#1 AAGTGTCTTTCCTCGTTGCTACTATCACTGAATTTTTTATTCTCTATTGATTCGTTTAAA 154 * **** * ** ** * ** ** * * * * ***** consensus_1921#0 TCCAACACATCAGTCGATTATACGAAGGGCATTTTTCAAAGTATCGGCTTCAAAGAGTTT 239 consensus_1921#1 GGTTTTTGTTCAGGCTTTTCTCCTCTTAGCACAGCTTCGATTATTGCCAC--AGCTGGTT 212 **** * ** * * *** * * *** * * * * ** consensus_1921#0 CATGATTACCTTGTGTTGCCAGAAGAAGAGAAGGGAGGGAAAAAAGGACAAGAATTATTG 299 consensus_1921#1 CATATACACAAC-TGT--CCCATTGATTCACATCGGTAGAATCTAATACATAAATTGGTG 269 *** ** *** ** ** * * *** * *** **** ** consensus_1921#0 CAAAGGGGTATTGATG-ACTTAAAAATGGTCACGAAGAGGTACGCGAAAAAACAGAAAAA 358 consensus_1921#1 GTACCTGTAATCATTTTAAGTTAAAATAATTTTAT---GTTATGGAAATAAAAAAAAAAA 326 * * ** * * * ***** * * ** * ** *** * ***** consensus_1921#0 ATGGGTTATGAATCGTCTACTTCGTCGCAGTGACAGACAAGTACCACCAATTTATGTATT 418 consensus_1921#1 A----------------------------------------------------------- 327 * consensus_1921#0 AGATTCTACCGATGTGAATCAATGGGACAGTTGTGTATATGAACCAGCTGTGGCAAT 475 consensus_1921#1 --------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |