These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1966#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 611 fasta sequence [CTTGCCTAGCTGGCTGACGTTGAGAACTCTTCGGCGTCGTTTGCGACGACAGCCAGTCGAAAAGGGAGTGTCCATCATCATCGATCGCTGTTTTCTCATTGGATTAGAAAGACTATCCAGGCGACGATTAATTAATGCCATACATTGTAATACACTAACGATACCATTACACGCGTAATAAGACATAACCGCCGTGGCCTATACCGTACACTGATAAATACATACACATACATACACGCGCGTATACATACACATACCACATATAAATATATACATACGATATGTATATGTACATCAGACAGATATATACACAGGTTCGTACACAGAAAAGTCGATATATGGTGCTAGGACGATCACACCCTGGTGCTTAATTCTGTATACACACAGAGCCATGTGCGTAAATTCGCACGGATCGCCTGCAGCCTTCGTCGAGGAGTCTAGATACGTCCTGACGCGTCGTGAACAGAACATAGATGGTCGAAACATATTTCCATTGTGTGATATCCGATACGAAGTAATGAAATTAATTAATAGTAGCATCAATATCGTTCCTGGGATTCTCCAAGGATTCTCCAAGACGATTATTAAAGGGAATATCATATAATATTAAC] [+] EMBL BI509600 [CTTGCCTAGCTGGCTGACGTTGAGAACTCTTCGGCGTCGTTTGCGACGACAGCCAGTCGAAAAGGGAGTGTCCATCATCATCGATCGCTGTTTTCTCATTGGATTAGAAAGACTATCCAGGCGACGATTAATTAATGCCATACATTGTAATACACTAACGATACCATTACACGCGTAATAAGACATAACCGCCGTGGCCTATACCGTACACTGATAAATACATACACATACATACACGCGCGTATACATACACATACCACATATAAATATATACATACGATATGTATATGTACATCAGACAGATATATACACAGGTTCGTACACAGAAAAGTCGATATATGGTGCTAGGACGATCACACCCTGGTGCTTAATTCTGTATACACACAGAGCCATGTGCGTAAATTCGCACGGATCGCCTGCAGCCTTCGTCGAGGAGTCTAGATACGTCCTGACGCGTCGTGAACAGAACATAGATGGTCGAAACATATTTCCATTGTGTGATATCCGATACGAAGTAATGAAATTAATTAATAGTAGCATCAATATCGTTCCTGGGATTCTCCAAGGATTCTCCAAGACGATTATTAAAGGGAATATCATATAATATTAAC] consensusID : consensus_1966#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 429 fasta sequence [AACTTCGATTTAAGTATAGCTGCTCTTTTGAGTTCAATTAGTGGACGTTGAGGACGAGATCGCGCGCGGATCGCCATTCCTCTTCGCGAAGTGCGTATCGTCGAGTTTTATTTTATTATTTTTTTTTTTTCTTCTTCTTCTTCTTCTCTCTTAATAATCTCTCCGTTCCACACCCCAAGTGAATTATTGGCTCCCTTCGCTCTTTGCTCGTCGGCCACTCTCTATTTTACAATAGTATTATGGTACATATTATTAACGGGAGATCAGTGGCGCGCAGTGGCCTACGTGCGATGATACGAAGGAACCGATATTTATCCCGATCTCTAAAATGCAGGTACATTTGTTTTTTGCATCGTGCGTCAGAGCATAGTACGCATTTTCATTTTCACAAACTATATCTCCATCGGTTAATATTATATGATATTCCCT] [+] EMBL BI504485 [AACTTCGATTTAAGTATAGCTGCTCTTTTGAGTTCAATTAGTGGACGTTGAGGACGAGATCGCGCGCGGATCGCCATTCCTCTTCGCGAAGTGCGTATCGTCGAGTTTTATTTTATTATTTTTTTTTTTTCTTCTTCTTCTTCTTCTCTCTTAATAATCTCTCCGTTCCACACCCCAAGTGAATTATTGGCTCCCTTCGCTCTTTGCTCGTCGGCCACTCTCTATTTTACAATAGTATTATGGTACATATTATTAACGGGAGATCAGTGGCGCGCAGTGGCCTACGTGCGATGATACGAAGGAACCGATATTTATCCCGATCTCTAAAATGCAGGTACATTTGTTTTTTGCATCGTGCGTCAGAGCATAGTACGCATTTTCATTTTCACAAACTATATCTCCATCGGTTAATATTATATGATATTCCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1966#0 CTTGCCTAGCTGGCTGACGTTGAGAACTCTTCGGCGTCGTTTGCGACGACAGCCAGTCGA 60 consensus_1966#1 ---------------AACTTCGATTTAAGTATAGCTGCTCTTTTGAGTTCAATTAGTGGA 45 ** * ** * ** * ** ** ** *** ** consensus_1966#0 AAAGGGAGTGTCCATCAT-CATCGATCGCTGTTTTCTCATTGGATTAGAAAGACTATCCA 119 consensus_1966#1 CGTTGAGGACGAGATCGCGCGCGGATCGCCATTC-CTCTTCG---CGAAGTGCGTATC-- 99 * * *** * ****** ** *** * * * * **** consensus_1966#0 GGCGACGATTAATTAATGCCATACATTGTAATACACTAACGATACCATTACACGCGTAAT 179 consensus_1966#1 GTCGAGTTTTATTTTAT----TATTTTTTTTTTTTCTTCTTCTTCTTCTTCTCTCTTAAT 155 * *** *** ** ** ** ** * * ** * * * * * * **** consensus_1966#0 AAGACATAACCGCCGTGGCCTATACCGTACACTGATAAATACATACACATACATACACGC 239 consensus_1966#1 AA-------TCTCTCCGTTCCACACCCCAAGTGAATTATTGGCTCCCTTCGC-TCTTTGC 207 ** * * * * * *** * ** * * * * * * ** consensus_1966#0 GCGTATACATACACATACCACATATAAATATATACATACGATATGTATATGTACATCAGA 299 consensus_1966#1 TCGTCGGC-----CACTCTCTATTTTACAATAGTATTATGGTACATAT-----TATTAAC 257 *** * ** * ** * * *** ** * ** *** ** * consensus_1966#0 CAGATATATACACAGGTTCGTACACAGAAAAGTCGATATATGGTGCTAGGACGATCACAC 359 consensus_1966#1 GGGAGAT-----CAG--TGGCGCGCAGTG--GCCTACGTGCGATGATACGAAG-----GA 303 ** ** *** * * * *** * * * * * ** ** ** * consensus_1966#0 CCTGGTGCTTAATTCTGTATACACACAGAGCCATGTGCGTAAATTCGCACGGATCGCCTG 419 consensus_1966#1 ACCGATATTTATCCCGATCTCTAAA-------ATGCAGGTACATTTG------TTTTTTG 350 * * * *** * * * * * *** *** *** * * ** consensus_1966#0 CAGCCTTCGTCGAGGAGTCTAGATACGTCCTGACGCGTCGTGAACAGAACATAGATGGTC 479 consensus_1966#1 CATCGTGCGTCA--GAGCATAG-TACGCATTTTCATTTTC---ACAAACTATA-----TC 399 ** * * **** *** *** **** * * * *** * *** ** consensus_1966#0 GAAACATATTTCCATTGTGTGATATCCGATACGAAGTAATGAAATTAATTAATAGTAGCA 539 consensus_1966#1 TCCATCGGTTAATATTATATGATATTCCCT------------------------------ 429 * ** *** * ****** * * consensus_1966#0 TCAATATCGTTCCTGGGATTCTCCAAGGATTCTCCAAGACGATTATTAAAGGGAATATCA 599 consensus_1966#1 ------------------------------------------------------------ consensus_1966#0 TATAATATTAAC 611 consensus_1966#1 ------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |