These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2036#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence [ACTCTGGAGACGTGATGGCCCAGGAATGTAAAAAATAATCCCACGAAGAAACAAACGGCAGAAATAAACTTGAAAACACCCTCGGATAAAATGTCGCATGATACAGGATCGATCGTGGGATTACAGCCGTACGAAACTATGGGGACATAGGCAGCAGAATGATTCCCATAACTAGCCACTGCGACGTAAACCGAGCCAACTCCGATATACGCGCTAAATATTCGTCTCATCGGTGAGGAAACAATGGAGGCCGTTGCCTTCGCTCCGTTCCCCTTGATATCGTCCACAGTCAGCATGTTTACGATACCCGTGAAATAAGTTTCGGCAGTGAGGTCCCGCTCGGACAGGTACATCTGATACACCTGGACCTCCACCGGCTCCTTTTCGCAAGTGCGGCGCATCGAGTTGAACGGTAACGAGGCTGGTTGCACGTCCACGATCACCATCGCGTCGCGTGTCTGCATTCTCGCGTAAGGCGCGATCTCGGTATTGAACTCCATGTTGCATCCACCCGGTACGGGTGCTTTATTGTTGTAAGCAATAACAACGAGCAGAGCCTTAACATCGTGAACATTATCATTTTTCACGAAAAATTGTGTCGTATTAGTGGTTAGCTTAGAGAGAAGACCAATGTTTGATCCAAATACGCTTCTATTCG] [+] EMBL BQ103801 [ACTCTGGAGACGTGATGGCCCAGGAATGTAAAAAATAATCCCACGAAGAAACAAACGGCAGAAATAAACTTGAAAACACCCTCGGATAAAATGTCGCATGATACAGGATCGATCGTGGGATTACAGCCGTACGAAACTATGGGGACATAGGCAGCAGAATGATTCCCATAACTAGCCACTGCGACGTAAACCGAGCCAACTCCGATATACGCGCTAAATATTCGTCTCATCGGTGAGGAAACAATGGAGGCCGTTGCCTTCGCTCCGTTCCCCTTGATATCGTCCACAGTCAGCATGTTTACGATACCCGTGAAATAAGTTTCGGCAGTGAGGTCCCGCTCGGACAGGTACATCTGATACACCTGGACCTCCACCGGCTCCTTTTCGCAAGTGCGGCGCATCGAGTTGAACGGTAACGAGGCTGGTTGCACGTCCACGATCACCATCGCGTCGCGTGTCTGCATTCTCGCGTAAGGCGCGATCTCGGTATTGAACTCCATGTTGCATCCACCCGGTACGGGTGCTTTATTGTTGTAAGCAATAACAACGAGCAGAGCCTTAACATCGTGAACATTATCATTTTTCACGAAAAATTGTGTCGTATTAGTGGTTAGCTTAGAGAGAAGACCAATGTTTGATCCAAATACGCTTCTATTCG] consensusID : consensus_2036#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 440 fasta sequence [ACTCGGCTTTGCGGCAATTTAATCGAATAAGTGTGTCACGCGGTTCATAACTCCGATCGACATGAGCCGCAATTTTGTCGGAGAGTTGCTGATCTTTCTGTTATTCTTCATTCACAGTTTAGATACGAAAGTATTATCAAATACATTGTCTCTCGGTGATGGAAGTGTATTTGAAATGAAGTTAACTAATCTTCATGACACTACACCATACATGAAACAAGTATCTATTGCAGCAAGTAGCAAAGCAATCTTTAATGTAACAAACGTTTCCTCCAACGCTTCATTTATTATTTTTCAAATTCATATTTATCAACATAATGTTACATTGTCTTTTGATAAAGATTGTCTTAATAAAGTTTCGAATAGAAGCGTATTTGGATCAAACATTGGTCTTCTCTCTAAGCTAACCACTAATACGACACAATTTTTCGTGAAAAATG] [+] EMBL BI514447 [ACTCGGCTTTGCGGCAATTTAATCGAATAAGTGTGTCACGCGGTTCATAACTCCGATCGACATGAGCCGCAATTTTGTCGGAGAGTTGCTGATCTTTCTGTTATTCTTCATTCACAGTTTAGATACGAAAGTATTATCAAATACATTGTCTCTCGGTGATGGAAGTGTATTTGAAATGAAGTTAACTAATCTTCATGACACTACACCATACATGAAACAAGTATCTATTGCAGCAAGTAGCAAAGCAATCTTTAATGTAACAAACGTTTCCTCCAACGCTTCATTTATTATTTTTCAAATTCATATTTATCAACATAATGTTACATTGTCTTTTGATAAAGATTGTCTTAATAAAGTTTCGAATAGAAGCGTATTTGGATCAAACATTGGTCTTCTCTCTAAGCTAACCACTAATACGACACAATTTTTCGTGAAAAATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2036#0 ACTCTGGAGACGTGATGGCCCAGGAATGTAAAAAATAATCCCACGAAGAAACAAACGGCA 60 consensus_2036#1 ------------------------------------------------------------ consensus_2036#0 GAAATAAACTTGAAAACACCCTCGGATAAAATGTCGCATGATACAGGATCGATCGTGGGA 120 consensus_2036#1 ------------------------------------------------------------ consensus_2036#0 TTACAGCCGTACGAAACTATGGGGACATAGGCAGCAGAATGATTCCCATAACTAGCCACT 180 consensus_2036#1 --------------------------------------------------ACTCGGCTTT 10 *** * * * consensus_2036#0 GCGACGTAAACCGAGCCAACTCCGATATACGCGCTAAATA-TTCGTCTCATCGGTGAGGA 239 consensus_2036#1 GCGGC--------AATTTAATCGAATAAGTGTGTCACGCGGTTCATAACTCCGATC--GA 60 *** * * * ** *** * * * *** * * ** * ** consensus_2036#0 AACAATGGAGGCCGTTGCCTTCGCTCCGTTCCCCTTGATATCGTCCACAGTCAGCATGTT 299 consensus_2036#1 CATGAGCCGCAATTTTGTCGGAGAGTTGCTGATCTTTCTGTTATTCTTCATTCACA-GTT 119 * * *** * * * * *** * * * * * ** *** consensus_2036#0 TACGATACCCGTGAAATAAGTTTCGGCAGTGAGGTCCCGCTCGGACAGGTACATCTGATA 359 consensus_2036#1 TA-GATAC----GAAAGTATTATCA--AATACATTGTCTCTCGGTGATGGAAGTGTATTT 172 ** ***** **** * * ** * * * * ***** * * * * * * consensus_2036#0 CACCTGGACCTCCACCGGCTCCTTTTCGCAAGTGCGGCGCATCGAGTTGAACGGTAACGA 419 consensus_2036#1 GAAATGAAGTTAACTAATCTTCATGACACTA-CACCATACATGAAACAAGTATCTATTGC 231 * ** * * ** * * * * * * *** * ** * consensus_2036#0 GGCTGGTTGCACGTCCACGATCACCATCGCGTCGCGTGTCTGCATTCTCGCGTAAGGCGC 479 consensus_2036#1 AGCAAGTAGCAAA---GCAATCTTTAATGTAACAAACGTTTCCTCCAACGCTTCATTTAT 288 ** ** *** * *** * * * ** * * *** * * consensus_2036#0 GATCTCGGTATTGAACTCCATGTTGCATCCACCCGGTACGGGTGCTTTATTGTTGTAAGC 539 consensus_2036#1 TATTT-----TTCAAATTCATATT-TATCAACATAATGTTA-CATTGTCTTTTGATAAAG 341 ** * ** ** * *** ** *** ** * * * ** * *** consensus_2036#0 AATAACAACGAGCAGAGCCTTAACATCGTGAACATTATCATTTTTCACGAAAAATTGTGT 599 consensus_2036#1 ATTGTC--TTAATAAAGTTTCGA-ATAG-AAGCGT----ATTTGGATCAAACATTGGTCT 393 * * * * * ** * * ** * * * * **** * ** * * ** * consensus_2036#0 CGTATTAGTGGTTAGCTTAGAGAGAAGACCAATGTTTGATCCAAATACGCTTCTATTCG 658 consensus_2036#1 TCTCTCTAAGCTAACCACTAATACGACACAATTTTTCGTGAAAAATG------------ 440 * * * * * * * * * ** * * ** * **** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |