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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2118#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 572 fasta sequence
[CAATTGAACATACAAATCGATTGCATCGTCCTCTTTTCTCTTGTCTCATAAGAAGAAATGAATTCATGAATTACTTTTACAGAAATACGAAAATCTGTTGCGAAAATTCTGAAGAATTCGAAAAAGATCAGCCTCATTATTATTTTTTGAATTTTAATTTTAAAAAAACTGTGTCGTTCGTTGCATGCTCGTTCAAAATTAGTGATCGAATATCAATCGAAGATCAATCGGACGCTTGACGTTCGTTCGACGTAGCAGTTCCATCGCGACCGATACCGCGTGCAATAAAACAAAATATGTAAACAATATTAATATCATTATATACAACATTTTTACGGCATATACGAATACGATGTAGAGAAAAGCAGGTGAAACAAGTTTAGGATAATATTACTTGTTGTTGTCTACCATAGCGTTGTAGTTATATACAATACAGGTAGAAAATTATAGGCAAGCCGAAGCGAATGTATGAAAGAACAAATGCGAGAGTGTAACGAAAGTGAGAGAGAAAAAAATGCATGTGAGCAAAAATGAACGTGAGAGAGAGAGAGAGAGAGAGAGATGCGAATGAG]
[+] EMBL BI514354 [CAATTGAACATACAAATCGATTGCATCGTCCTCTTTTCTCTTGTCTCATAAGAAGAAATGAATTCATGAATTACTTTTACAGAAATACGAAAATCTGTTGCGAAAATTCTGAAGAATTCGAAAAAGATCAGCCTCATTATTATTTTTTGAATTTTAATTTTAAAAAAACTGTGTCGTTCGTTGCATGCTCGTTCAAAATTAGTGATCGAATATCAATCGAAGATCAATCGGACGCTTGACGTTCGTTCGACGTAGCAGTTCCATCGCGACCGATACCGCGTGCAATAAAACAAAATATGTAAACAATATTAATATCATTATATACAACATTTTTACGGCATATACGAATACGATGTAGAGAAAAGCAGGTGAAACAAGTTTAGGATAATATTACTTGTTGTTGTCTACCATAGCGTTGTAGTTATATACAATACAGGTAGAAAATTATAGGCAAGCCGAAGCGAATGTATGAAAGAACAAATGCGAGAGTGTAACGAAAGTGAGAGAGAAAAAAATGCATGTGAGCAAAAATGAACGTGAGAGAGAGAGAGAGAGAGAGAGATGCGAATGAG]
consensusID : consensus_2118#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 518 fasta sequence
[CATCGTCCTCTTTTCTCTTGTCTCATAAGAAGATATGAATTCATGAATTACTTTTACAGAAATACGAAAATCTGTAAGAATTCGAAAAAGATCAGCCACCCGTTATTATTTTTTGAATTTTAATTTTAAAAAAACTGTGTCGTTCGTTGCATGCTCGTTCAAAATTAGTGATCGAATATCAATCGAAGATCAATCGGACGCTTGACGTTCGTTCGACGTAGCAGTTCCATCGCGACCGATACCGCGTGCAATAAAACAAAATATGTAAACAATATTAATATCATTATATACAACATTTTTACGGCATATACGAATACGATGTAGAGAAAAGCAGGTGAAACAAGTTTAGGATAATATTACTTGTTGTTGTCTACCATAGCGTTGTAGTTATATACAATACAGGTAGAAAATTATAGGCAAGCCGAAGCGAATGTGTGAAAGAACAAATGCGAGAGTGTAACGTGAGAGAGAAAAAAATGCATGTGAGCAAAAATGAACGTGAAAGAGAGAGAGAGAGA]
[+] EMBL BI517179 [CATCGTCCTCTTTTCTCTTGTCTCATAAGAAGATATGAATTCATGAATTACTTTTACAGAAATACGAAAATCTGTAAGAATTCGAAAAAGATCAGCCACCCGTTATTATTTTTTGAATTTTAATTTTAAAAAAACTGTGTCGTTCGTTGCATGCTCGTTCAAAATTAGTGATCGAATATCAATCGAAGATCAATCGGACGCTTGACGTTCGTTCGACGTAGCAGTTCCATCGCGACCGATACCGCGTGCAATAAAACAAAATATGTAAACAATATTAATATCATTATATACAACATTTTTACGGCATATACGAATACGATGTAGAGAAAAGCAGGTGAAACAAGTTTAGGATAATATTACTTGTTGTTGTCTACCATAGCGTTGTAGTTATATACAATACAGGTAGAAAATTATAGGCAAGCCGAAGCGAATGTGTGAAAGAACAAATGCGAGAGTGTAACGTGAGAGAGAAAAAAATGCATGTGAGCAAAAATGAACGTGAAAGAGAGAGAGAGAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2118#0 CAATTGAACATACAAATCGATTGCATCGTCCTCTTTTCTCTTGTCTCATAAGAAGAAATG 60
consensus_2118#1 -----------------------CATCGTCCTCTTTTCTCTTGTCTCATAAGAAGATATG 37
********************************* ***
consensus_2118#0 AATTCATGAATTACTTTTACAGAAATACGAAAATCTGTTGCGAAAATTCTGAAGAATTCG 120
consensus_2118#1 AATTCATGAATTACTTTTACAGAAATACGAAAATCTGT-------------AAGAATTCG 84
************************************** *********
consensus_2118#0 AAAAAGATCAGCC--TCATTATTATTTTTTGAATTTTAATTTTAAAAAAACTGTGTCGTT 178
consensus_2118#1 AAAAAGATCAGCCACCCGTTATTATTTTTTGAATTTTAATTTTAAAAAAACTGTGTCGTT 144
************* * ******************************************
consensus_2118#0 CGTTGCATGCTCGTTCAAAATTAGTGATCGAATATCAATCGAAGATCAATCGGACGCTTG 238
consensus_2118#1 CGTTGCATGCTCGTTCAAAATTAGTGATCGAATATCAATCGAAGATCAATCGGACGCTTG 204
************************************************************
consensus_2118#0 ACGTTCGTTCGACGTAGCAGTTCCATCGCGACCGATACCGCGTGCAATAAAACAAAATAT 298
consensus_2118#1 ACGTTCGTTCGACGTAGCAGTTCCATCGCGACCGATACCGCGTGCAATAAAACAAAATAT 264
************************************************************
consensus_2118#0 GTAAACAATATTAATATCATTATATACAACATTTTTACGGCATATACGAATACGATGTAG 358
consensus_2118#1 GTAAACAATATTAATATCATTATATACAACATTTTTACGGCATATACGAATACGATGTAG 324
************************************************************
consensus_2118#0 AGAAAAGCAGGTGAAACAAGTTTAGGATAATATTACTTGTTGTTGTCTACCATAGCGTTG 418
consensus_2118#1 AGAAAAGCAGGTGAAACAAGTTTAGGATAATATTACTTGTTGTTGTCTACCATAGCGTTG 384
************************************************************
consensus_2118#0 TAGTTATATACAATACAGGTAGAAAATTATAGGCAAGCCGAAGCGAATGTATGAAAGAAC 478
consensus_2118#1 TAGTTATATACAATACAGGTAGAAAATTATAGGCAAGCCGAAGCGAATGTGTGAAAGAAC 444
************************************************** *********
consensus_2118#0 AAATGCGAGAGTGTAACGAAAGTGAGAGAGAAAAAAATGCATGTGAGCAAAAATGAACGT 538
consensus_2118#1 AAATGCGAGAGTGTAACG----TGAGAGAGAAAAAAATGCATGTGAGCAAAAATGAACGT 500
****************** **************************************
consensus_2118#0 GAGAGAGAGAGAGAGAGAGAGAGATGCGAATGAG 572
consensus_2118#1 GAAAGAGAGAGAGAGAGA---------------- 518
** ***************
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |