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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2195#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 596 fasta sequence
[GTTTATTAATATGAAGGTAAATTGTTTTTTTCAATCTCTAGATTTGTATCATTTGGTTCTTTATCTTGTTTACTTTCTTCTTCAAGGAATTTTAAGCACTTTAATTGTTTCTATAATCCCCTTCATATACTAAACTTGTTACAGGATTAATTAGCATCTTATATGCTAATTATAACGAAGATATTACCAATAAGGTAATTACAAATCCAGCAGTCTTTCTTCCAAAGCATAAGAATAAGACTTTATGATGAAGTGTTTACATCATTTGTTAAGGAATTGAGAAGTGAAACTTTGTTATCTTCCAAATCGAGAGGATCCGAGGTATAAAGACTGGTCGTAGCTGTATCACCTGCCGTGCTAGTTACAGGAGATGTGGCATTCAAGAAAATGTCATCGTCGAAATCTAATAAATTTGAAGTAGGATTATATGCCATAAGTTCACCACCACTTGTTCCACTAATATTTTCTCCAACATTAGCATGATCATCTTCCTCTTTCTCAGAATGTGGATTTAATTCTGGATTAACTGGCATACCAAACGACATTGGATCATCCGCTCCAAATAACTGCAAATGCATATTAATTAAAAAAAAAAA]
[+] EMBL BI503961 [GTTTATTAATATGAAGGTAAATTGTTTTTTTCAATCTCTAGATTTGTATCATTTGGTTCTTTATCTTGTTTACTTTCTTCTTCAAGGAATTTTAAGCACTTTAATTGTTTCTATAATCCCCTTCATATACTAAACTTGTTACAGGATTAATTAGCATCTTATATGCTAATTATAACGAAGATATTACCAATAAGGTAATTACAAATCCAGCAGTCTTTCTTCCAAAGCATAAGAATAAGACTTTATGATGAAGTGTTTACATCATTTGTTAAGGAATTGAGAAGTGAAACTTTGTTATCTTCCAAATCGAGAGGATCCGAGGTATAAAGACTGGTCGTAGCTGTATCACCTGCCGTGCTAGTTACAGGAGATGTGGCATTCAAGAAAATGTCATCGTCGAAATCTAATAAATTTGAAGTAGGATTATATGCCATAAGTTCACCACCACTTGTTCCACTAATATTTTCTCCAACATTAGCATGATCATCTTCCTCTTTCTCAGAATGTGGATTTAATTCTGGATTAACTGGCATACCAAACGACATTGGATCATCCGCTCCAAATAACTGCAAATGCATATTAATTAAAAAAAAAAA]
consensusID : consensus_2195#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 557 fasta sequence
[AAGCACTTTAATTGTTTCTATAATCCCCTTCATATACTAAACTTGTTACAGGATTAATTAGCATCTTATATGCTAATTATAACGAAGATATTACCAATAAGGTAATTACAAATCCAGCAGTCTTTCTTCCAAAGCATAAGAATAAGACTTTATGATGAAGTGTTTACATCATTTGTTAAGGAATTGAGAAGTGAAACTTTGTTATCTTCCAAATCGAGAGGATCCGAGGTATAAAGACTGGTCGTAGCTGTATCACCTGCCGTGCTAGTTACAGGAGATGTGGCATTCAAGAAAATGTCATCGTCGAAATCTAATAAATTTGAAGTAGGATTATATGCCATAAGTTCACCACCACTTGTTCCACTAATATTTTCTGCAACATTAGCATGATCATCTTCCTCTTTCTCAGAATGTGGATTTAATTCTGGATTAACTGGCATACCAAACGACATTGGATCATCCGCTCCAAATAAACCAAGAAGTGTATTTGCATCAATACTGTAACCCTCGCTACGTAAGATTTCACGAAGATTGTCCAATTCCGTTTGCATTGTTTC]
[-] EMBL BI503876 [AAGCACTTTAATTGTTTCTATAATCCCCTTCATATACTAAACTTGTTACAGGATTAATTAGCATCTTATATGCTAATTATAACGAAGATATTACCAATAAGGTAATTACAAATCCAGCAGTCTTTCTTCCAAAGCATAAGAATAAGACTTTATGATGAAGTGTTTACATCATTTGTTAAGGAATTGAGAAGTGAAACTTTGTTATCTTCCAAATCGAGAGGATCCGAGGTATAAAGACTGGTCGTAGCTGTATCACCTGCCGTGCTAGTTACAGGAGATGTGGCATTCAAGAAAATGTCATCGTCGAAATCTAATAAATTTGAAGTAGGATTATATGCCATAAGTTCACCACCACTTGTTCCACTAATATTTTCTGCAACATTAGCATGATCATCTTCCTCTTTCTCAGAATGTGGATTTAATTCTGGATTAACTGGCATACCAAACGACATTGGATCATCCGCTCCAAATAAACCAAGAAGTGTATTTGCATCAATACTGTAACCCTCGCTACGTAAGATTTCACGAAGATTGTCCAATTCCGTTTGCATTGTTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2195#0 GTTTATTAATATGAAGGTAAATTGTTTTTTTCAATCTCTAGATTTGTATCATTTGGTTCT 60
consensus_2195#1 ------------------------------------------------------------
consensus_2195#0 TTATCTTGTTTACTTTCTTCTTCAAGGAATTTTAAGCACTTTAATTGTTTCTATAATCCC 120
consensus_2195#1 ---------------------------------AAGCACTTTAATTGTTTCTATAATCCC 27
***************************
consensus_2195#0 CTTCATATACTAAACTTGTTACAGGATTAATTAGCATCTTATATGCTAATTATAACGAAG 180
consensus_2195#1 CTTCATATACTAAACTTGTTACAGGATTAATTAGCATCTTATATGCTAATTATAACGAAG 87
************************************************************
consensus_2195#0 ATATTACCAATAAGGTAATTACAAATCCAGCAGTCTTTCTTCCAAAGCATAAGAATAAGA 240
consensus_2195#1 ATATTACCAATAAGGTAATTACAAATCCAGCAGTCTTTCTTCCAAAGCATAAGAATAAGA 147
************************************************************
consensus_2195#0 CTTTATGATGAAGTGTTTACATCATTTGTTAAGGAATTGAGAAGTGAAACTTTGTTATCT 300
consensus_2195#1 CTTTATGATGAAGTGTTTACATCATTTGTTAAGGAATTGAGAAGTGAAACTTTGTTATCT 207
************************************************************
consensus_2195#0 TCCAAATCGAGAGGATCCGAGGTATAAAGACTGGTCGTAGCTGTATCACCTGCCGTGCTA 360
consensus_2195#1 TCCAAATCGAGAGGATCCGAGGTATAAAGACTGGTCGTAGCTGTATCACCTGCCGTGCTA 267
************************************************************
consensus_2195#0 GTTACAGGAGATGTGGCATTCAAGAAAATGTCATCGTCGAAATCTAATAAATTTGAAGTA 420
consensus_2195#1 GTTACAGGAGATGTGGCATTCAAGAAAATGTCATCGTCGAAATCTAATAAATTTGAAGTA 327
************************************************************
consensus_2195#0 GGATTATATGCCATAAGTTCACCACCACTTGTTCCACTAATATTTTCTCCAACATTAGCA 480
consensus_2195#1 GGATTATATGCCATAAGTTCACCACCACTTGTTCCACTAATATTTTCTGCAACATTAGCA 387
************************************************ ***********
consensus_2195#0 TGATCATCTTCCTCTTTCTCAGAATGTGGATTTAATTCTGGATTAACTGGCATACCAAAC 540
consensus_2195#1 TGATCATCTTCCTCTTTCTCAGAATGTGGATTTAATTCTGGATTAACTGGCATACCAAAC 447
************************************************************
consensus_2195#0 GACATTGGATCATCCGCTCCAAATAA--CTGCAAATGCATATTAATTAAAAAAAAAAA-- 596
consensus_2195#1 GACATTGGATCATCCGCTCCAAATAAACCAAGAAGTGTATTTGCATCAATACTGTAACCC 507
************************** * ** ** ** * ** ** * **
consensus_2195#0 --------------------------------------------------
consensus_2195#1 TCGCTACGTAAGATTTCACGAAGATTGTCCAATTCCGTTTGCATTGTTTC 557
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |