These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2341#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence [CAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACGGAGAATTGACGTACGATGTGATTAAAAATATGAAATATTTGGACAAGGTTCTCAAAGAAACTTTAAGGAAGTATCCAATAATGGCAATGCTAACCAGAGAAGCGCAGGAAAATTACACGTTTAAGGGCACTAAAGTTACTATCGAGAAGGGTATAAAAGTGTGGATACTGCCGTATGGAATTCAAAATGATCCGGATATATTTCCAAATCCTGATATTTTCGACCCCGAAAGATTCGATGAGGAGGCTGTAGCTGCCAGGCATCCAATGAGTTATTTACCTTTTGGCGATGGACCAAGAAACTGCATTGGTGCACGTTTTGCACAATTTCAAAGCAAAATTGGTATTATAACAATTGTTCGTAATCACAAAATTGATGTTTGCGAGCAAACTAAGATTCCATACGAAAGTGATCCATTTCAATTTTTGTTAGCACTGAAAGGAGGTATCAATCTAAAAAATAAGTAAAATATAAAATTAATATGAGTATTATGTATGTATATATGCATATTAACAAAAGTTAATATGTAAAAGTTATTCAACATATATTAGTTAAAAGTTTGTAAAGTTTAAAAGATAATTATGAGATTATAAAATTTAT] [+] EMBL BI503528 [CAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACGGAGAATTGACGTACGATGTGATTAAAAATATGAAATATTTGGACAAGGTTCTCAAAGAAACTTTAAGGAAGTATCCAATAATGGCAATGCTAACCAGAGAAGCGCAGGAAAATTACACGTTTAAGGGCACTAAAGTTACTATCGAGAAGGGTATAAAAGTGTGGATACTGCCGTATGGAATTCAAAATGATCCGGATATATTTCCAAATCCTGATATTTTCGACCCCGAAAGATTCGATGAGGAGGCTGTAGCTGCCAGGCATCCAATGAGTTATTTACCTTTTGGCGATGGACCAAGAAACTGCATTGGTGCACGTTTTGCACAATTTCAAAGCAAAATTGGTATTATAACAATTGTTCGTAATCACAAAATTGATGTTTGCGAGCAAACTAAGATTCCATACGAAAGTGATCCATTTCAATTTTTGTTAGCACTGAAAGGAGGTATCAATCTAAAAAATAAGTAAAATATAAAATTAATATGAGTATTATGTATGTATATATGCATATTAACAAAAGTTAATATGTAAAAGTTATTCAACATATATTAGTTAAAAGTTTGTAAAGTTTAAAAGATAATTATGAGATTATAAAATTTAT] consensusID : consensus_2341#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 469 fasta sequence [TTCCATATCGGACAAGGACAGCGAGTTTCGTATAATCGGCAGAAAATTATTCACGCCCACGTTTAAAACAATAGTCAGAGATGTCTGCAGGCAATTTTTGCCAGGATTGTACGATGTGATCGGTCACAAGCTTCAAATCGAAGAAGTAAATGAATTTCTCACGAATCTGATCAAGGACACGATAAATTACAGAAAAGAGAACAAAATAGTTAGACCCGATTTTGTCAACACATTGATAGAGCTTAAAGATCATCCAGAGAAATTAGAAACTATAAAGCTGACAGATTCGATGATTGCTTCGCAAGCTTTTGTCTTTTTTGTTGCTGGTTTCGAAACTTCTTCATCCACGATATCTCATGCCCTTTACGAGCTGGCGCAGAATCAGGAAATCCAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACAGAGAATTGACGTACGATGTGATTAAAAATATG] [+] EMBL BI509645 [TTCCATATCGGACAAGGACAGCGAGTTTCGTATAATCGGCAGAAAATTATTCACGCCCACGTTTAAAACAATAGTCAGAGATGTCTGCAGGCAATTTTTGCCAGGATTGTACGATGTGATCGGTCACAAGCTTCAAATCGAAGAAGTAAATGAATTTCTCACGAATCTGATCAAGGACACGATAAATTACAGAAAAGAGAACAAAATAGTTAGACCCGATTTTGTCAACACATTGATAGAGCTTAAAGATCATCCAGAGAAATTAGAAACTATAAAGCTGACAGATTCGATGATTGCTTCGCAAGCTTTTGTCTTTTTTGTTGCTGGTTTCGAAACTTCTTCATCCACGATATCTCATGCCCTTTACGAGCTGGCGCAGAATCAGGAAATCCAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACAGAGAATTGACGTACGATGTGATTAAAAATATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2341#0 CAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACGGAGAATTG-----A 55 consensus_2341#1 ----TTCCATATCG-GACAAGGACAGCGAGTTTCGTATAATCGGCAGAAAATTATTCACG 55 *** ** * *** ** ** * ** * ** **** consensus_2341#0 CGTACGATGTGATTAAAAATATGAAATATTTGGACAAGGTTCTCAAAGAAACTTTAAGGA 115 consensus_2341#1 CCCACGTTTAAAACAATAGTCAGAGATGTCTGCAGGCAATTTTTGCCAGGATTGTACGAT 115 * *** * * ** * * ** ** * ** * ** * * * ** * consensus_2341#0 AGTATCCAATAATGGCAATGCTAACCAGAGAAGCGCAGGAAAATTACACGTTTAAGGGCA 175 consensus_2341#1 GTGATCGGTCACAAGC--TTCAAATCGAAGAAGTAAATGAATTTCTCACGAATCTG---A 170 *** * ** * * ** * ***** * *** * **** * * * consensus_2341#0 CTAAAGTTACTATCGAGAAGGGTATAAAAGTGTGGATACTGCCGTATGGAATTCAAAATG 235 consensus_2341#1 TCAAGGACACGAT-----AAATTACAGAAAAGAGAACAAAATAGTTAG--ACCCGATTTT 223 ** * ** ** * ** * ** * * * * ** * * * * * consensus_2341#0 ATCCGGATATATTTCCAAATCCTGATATTTTCGACCCCGAAAGATTCGATGAGGAGGCTG 295 consensus_2341#1 GTC--AACACATTGATAGAGCTTAAAGATC---ATCCAGAGAAATTAGA----AACTATA 274 ** * * *** * * * * * * * ** ** * *** ** * * consensus_2341#0 TAGCTGCCAGGCATCCAATGAGTTATTTACCTTTTGGCGATGGACCAAGAAACTGCATTG 355 consensus_2341#1 AAGCTGACAG--ATTCGATGATTGCTTCGC------------AAGCTTTTGTCTTTTTTG 320 ***** *** ** * **** * ** * * * ** *** consensus_2341#0 GTGCACGTTTTGCACAATTTCAAAGCAAAATTGGTATTATAACAATTGTTCGTAATCACA 415 consensus_2341#1 TTGCTGGTTTCGAAACTTCTTCATCCACGAT--ATCTCATGCCCTTTACGAGCTGGCGCA 378 *** **** * * * * * ** ** * * ** * ** * * ** consensus_2341#0 AAATTGATGTTTGCGAG-CAAACTAAGATTCCATACGAAAGTGATCCATTTCAATTTTTG 474 consensus_2341#1 GAATCAGGAAATCCAAGACAAGCTTCGCGAGGAAATCAGAGAAGTTTATGAAAAACACAG 438 *** * * ** *** ** * * * * ** * ** ** * consensus_2341#0 TTAGCACTGAAAGGAGGTATCAATCTAAAAAATAAGTAAAATATAAAATTAATATGAGTA 534 consensus_2341#1 --AGAATTGACGTACGATGT-GATTAAAAATATG-------------------------- 469 ** * *** * * * ** **** ** consensus_2341#0 TTATGTATGTATATATGCATATTAACAAAAGTTAATATGTAAAAGTTATTCAACATATAT 594 consensus_2341#1 ------------------------------------------------------------ consensus_2341#0 TAGTTAAAAGTTTGTAAAGTTTAAAAGATAATTATGAGATTATAAAATTTAT 646 consensus_2341#1 ---------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |