These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2384#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence [AAAACATGTTTCCGGCTTATTCATATTTATCAGCTTATGATAGACATAAAAAACTTATTAATGACTATTTTACGTTGTATGGAGGTTCGGTATCATCTTTAGAACGAGACACCTCTTGACGTTTCGGCCTGTGTTTCGAGGTCCCGAGACAAGACAGACTATGATGTTATTAAAGAAAACCATAGATTTTTATGGGATCAGGATAAAGATGAACCAAATACATGGGGTGCTCGTTTGGCAAAGAAATATTATGATAAATTGTTTAAAGAATATTGTATAGCAGATTTAACATACTATAAGCAAAACAAGGTTGCTTTAAGATGGAGAATAGAAAAAGAAGTTATCATTGGTAAAGGACAATTTGAATGTGGAAATAAAAAATGTAAAAATAAGGAACAACTTAAGTCTTGGGAAGTAAATTTTGGTTATATAGAGCATGGTCAAAAAAAGAACGCTCTTGTCAAATTAAGATTGTGTCCTGAATGTTCCATAAAGTTGAATTATAGATCTCAAAAAAGAGAAGCAAAAAAACATAAAATATTAAAAAGATTAGGAACAAATATAGAAACATTTAATAATACACCTAGTA] [+] EMBL BI503440 [AAAACATGTTTCCGGCTTATTCATATTTATCAGCTTATGATAGACATAAAAAACTTATTAATGACTATTTTACGTTGTATGGAGGTTCGGTATCATCTTTAGAACGAGACACCTCTTGACGTTTCGGCCTGTGTTTCGAGGTCCCGAGACAAGACAGACTATGATGTTATTAAAGAAAACCATAGATTTTTATGGGATCAGGATAAAGATGAACCAAATACATGGGGTGCTCGTTTGGCAAAGAAATATTATGATAAATTGTTTAAAGAATATTGTATAGCAGATTTAACATACTATAAGCAAAACAAGGTTGCTTTAAGATGGAGAATAGAAAAAGAAGTTATCATTGGTAAAGGACAATTTGAATGTGGAAATAAAAAATGTAAAAATAAGGAACAACTTAAGTCTTGGGAAGTAAATTTTGGTTATATAGAGCATGGTCAAAAAAAGAACGCTCTTGTCAAATTAAGATTGTGTCCTGAATGTTCCATAAAGTTGAATTATAGATCTCAAAAAAGAGAAGCAAAAAAACATAAAATATTAAAAAGATTAGGAACAAATATAGAAACATTTAATAATACACCTAGTA] consensusID : consensus_2384#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 527 fasta sequence [ATATATATTTTAATTAATATTTCAACGTTACATCTTGAATTTAAAATAAAAGCAGTTTTATAAGAAGAAAACATGTTTCCGGCTTATTCATATTTATCAGCTTATGATAGACATAAAAAACTTATTAATGACTATTTTACGTTGTATGGAGGTTCGGTATCATCTTTAGAACGAGACACGTATGTTAAATTTTTTAATTTGATTTCACATATTTTTATATCATTATTTAAATCATAACCATATTGTATAATTTGCATATAAATTAATATTTTTTTATCTATATTGATTCAAAATATAAAAATTTAATAAAAAATATATTCAAATATTAAAAAAATACATATAATATAAAAATAAACGATAAAGAAATGACAGCTTTGTAAACTCTAAAACAAGCAGCTCTTGACGTTTCGGCCTGTGTTTCGAGGTCCCGAGACAAGACAGACTATGATGTTATTAAAGAAAACCATAGATTTTTATGGGATCAGGATAAAGATGAACCAAATACATGGGGTGCTCGTTTGGCAAAG] [+] EMBL BI510433 [ATATATATTTTAATTAATATTTCAACGTTACATCTTGAATTTAAAATAAAAGCAGTTTTATAAGAAGAAAACATGTTTCCGGCTTATTCATATTTATCAGCTTATGATAGACATAAAAAACTTATTAATGACTATTTTACGTTGTATGGAGGTTCGGTATCATCTTTAGAACGAGACACGTATGTTAAATTTTTTAATTTGATTTCACATATTTTTATATCATTATTTAAATCATAACCATATTGTATAATTTGCATATAAATTAATATTTTTTTATCTATATTGATTCAAAATATAAAAATTTAATAAAAAATATATTCAAATATTAAAAAAATACATATAATATAAAAATAAACGATAAAGAAATGACAGCTTTGTAAACTCTAAAACAAGCAGCTCTTGACGTTTCGGCCTGTGTTTCGAGGTCCCGAGACAAGACAGACTATGATGTTATTAAAGAAAACCATAGATTTTTATGGGATCAGGATAAAGATGAACCAAATACATGGGGTGCTCGTTTGGCAAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2384#0 ------------------------------------------------------------ consensus_2384#1 ATATATATTTTAATTAATATTTCAACGTTACATCTTGAATTTAAAATAAAAGCAGTTTTA 60 consensus_2384#0 -------AAAACATGTTTCCGGCTTATTCATATTTATCAGCTTATGATAGACATAAAAAA 53 consensus_2384#1 TAAGAAGAAAACATGTTTCCGGCTTATTCATATTTATCAGCTTATGATAGACATAAAAAA 120 ***************************************************** consensus_2384#0 CTTATTAATGACTATTTTACGTTGTATGGAGGTTCGGTATCATCTTTAGAACGAGACACC 113 consensus_2384#1 CTTATTAATGACTATTTTACGTTGTATGGAGGTTCGGTATCATCTTTAGAACGAGACACG 180 *********************************************************** consensus_2384#0 TCTTGACGTTTCGGCCTGTGTTTCGAGGTCCCGAGACAAGACAGACTATGATGTTATTAA 173 consensus_2384#1 T----ATGTTAAATTTTTTAATTTGATTTC----------ACATATTTTTATATCATTAT 226 * * *** * * ** ** ** *** * * * ** * **** consensus_2384#0 AGAAAACCATAGATTTTTATGGGATCAGGATAAAGATGAACCAAATACATGGGGTGCTCG 233 consensus_2384#1 TTAAATCATAACCATATTGTATAATTTGCATATAAATTAATATTTTTTTATCTATATTGA 286 *** * * * ** * ** * *** * ** ** * * * consensus_2384#0 TTTGGCAAAGAAATATT--ATGATAAAT-TGTTTAAAGAATATTGTATAGCAGATTTAAC 290 consensus_2384#1 TTCAAAATATAAAAATTTAATAAAAAATATATTCAAATATTA--AAAAAATACATATAAT 344 ** * * *** *** ** * **** * ** *** * ** * * * ** *** consensus_2384#0 ATACTA-TAAGCAAAACAAGGTTGCTTTAAGATGGAGAATAGAAAAAGAAGTTATCATTG 349 consensus_2384#1 ATAAAAATAAACGATAAAGAAATGA--CAGCTTTGTAAACTCTAAAACAAGCAGCTCTTG 402 *** * *** * * * * ** * * * ** **** *** *** consensus_2384#0 GTAAAGGACAATTTGAATGTGGAAATAAAAAATGTAAAAATAAGGAACAACTTAAGTCTT 409 consensus_2384#1 -------ACGTTTCGGCC--TGTGTTTCGAGGTCCCGAGACAAGACAGACTATGATGTTA 453 ** ** * * * * * * * *** * * * * * consensus_2384#0 GGGAAGTAAATTTTGGTTATATAGAGCATGGTCAAAAAAAGAACGCTCTTGTCAAATTAA 469 consensus_2384#1 TTAAAGAAAACCATAGATTTTTATGG---GATCAGGATAAAGATGA----ACCAAAT--A 504 *** *** * * * * ** * * *** * ** * * ***** * consensus_2384#0 GATTGTGTCCTGAATGTTCCATAAAGTTGAATTATAGATCTCAAAAAAGAGAAGCAAAAA 529 consensus_2384#1 CATGGGGTGCT---CGTTTGGCAAAG---------------------------------- 527 ** * ** ** *** **** consensus_2384#0 AACATAAAATATTAAAAAGATTAGGAACAAATATAGAAACATTTAATAATACACCTAGTA 589 consensus_2384#1 ------------------------------------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |