These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2398#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 605 fasta sequence [TACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTGAATTGTATTATGTACCAATGGCAACAACAGAAGGATGTTTAGTAGCATCTACAAATCGTGGTAGTAGAGCATTGTTAAAATGTGGTGTAACAAGCCGTGTAGTTGCTGATGGAATGACTAGAGGACCAGTTGTGAGATTTCCAAATATTGTTAGAGCAAGTGAAGCTATGGCATGGATGCAAGATCCTGATAATTTTAAAGAAATGAAAAATAGTTTTAATTTAACCAGTAGATTTGCACGTTTGACAAAGATTAATATACGTATTGCTGGCAGGCATTTGTTTATTCGTTTTGTAGCAACTACTGGTGACGCTATGGGAATGAATATGTTATCTAAAGGAACTGAAAAATCATTAAATACAGTGAAAGAACATTTTCCTGATATGGAAATATTATCATTAAGCGGTAATTTTTGCACGGATAAAAAGCCAGCAGCAGTAAATTGGGTTTGTGGTAGAGGCAAAAGTGTGGTTTGCGAAGCAGTTGTACCTGCAGATATTGTTACAAATGTGTTAAAAACATCTGTTCATGCTTTAGNTGATGTGAATATAAGTAAAAATATGATT] [+] EMBL BI503396 [TACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTGAATTGTATTATGTACCAATGGCAACAACAGAAGGATGTTTAGTAGCATCTACAAATCGTGGTAGTAGAGCATTGTTAAAATGTGGTGTAACAAGCCGTGTAGTTGCTGATGGAATGACTAGAGGACCAGTTGTGAGATTTCCAAATATTGTTAGAGCAAGTGAAGCTATGGCATGGATGCAAGATCCTGATAATTTTAAAGAAATGAAAAATAGTTTTAATTTAACCAGTAGATTTGCACGTTTGACAAAGATTAATATACGTATTGCTGGCAGGCATTTGTTTATTCGTTTTGTAGCAACTACTGGTGACGCTATGGGAATGAATATGTTATCTAAAGGAACTGAAAAATCATTAAATACAGTGAAAGAACATTTTCCTGATATGGAAATATTATCATTAAGCGGTAATTTTTGCACGGATAAAAAGCCAGCAGCAGTAAATTGGGTTTGTGGTAGAGGCAAAAGTGTGGTTTGCGAAGCAGTTGTACCTGCAGATATTGTTACAAATGTGTTAAAAACATCTGTTCATGCTTTAGNTGATGTGAATATAAGTAAAAATATGATT] consensusID : consensus_2398#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 329 fasta sequence [TTCACAAATTCCCAGATCTGTAGAAGAATGTCTTAAAATATACAAATCTGAGCTTGGTGCAAATGGATTAACAGATGAAGAAGTAATTCAATTGGTAAAGAACAATCATATAGCTGCTTATCAATTAGAAAAAGCAGTTGGTGATATGGAACGGGGTGTAGAAATCAGGCGTTTTATAATAGGAGAGGCTGGAAATTNCCTTGATTATCTTTCCAATTTGCCATATAAAGATTATGATTATAGTAAAGTATTAGGAGCTTGTTGTGAGAATGTCATGGGATATGTACCAGTACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTG] [+] EMBL BI511989 [TTCACAAATTCCCAGATCTGTAGAAGAATGTCTTAAAATATACAAATCTGAGCTTGGTGCAAATGGATTAACAGATGAAGAAGTAATTCAATTGGTAAAGAACAATCATATAGCTGCTTATCAATTAGAAAAAGCAGTTGGTGATATGGAACGGGGTGTAGAAATCAGGCGTTTTATAATAGGAGAGGCTGGAAATTNCCTTGATTATCTTTCCAATTTGCCATATAAAGATTATGATTATAGTAAAGTATTAGGAGCTTGTTGTGAGAATGTCATGGGATATGTACCAGTACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2398#0 TACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTGAATTGTATTATGTACCAATGG 60 consensus_2398#1 ---------------------------------------------TTCACAAATTCCCAG 15 * * * * consensus_2398#0 CAACAACAGAAGGATGTTTAGTAGCATCTACAAATCGTGG--TAGTAGAGCATTGTTAAA 118 consensus_2398#1 -ATCTGTAGAAGAATGTCT--TAAAATATACAAATCTGAGCTTGGTGCAAATGGATTAAC 72 * * ***** **** * ** ** ******** * * ** * **** consensus_2398#0 ATGTGGTGTAACAAGCCGTGTAGTTGCTGATGGAATGACTAGAGGACCAGTTGTGAGATT 178 consensus_2398#1 AGATG----AAGAAGTAATTCAATTGGTAA-AGAACAATCATATAGCTGCTTATCA-ATT 126 * ** ** *** * * *** * * *** * * * * ** * * *** consensus_2398#0 TCCAAATATTGTTAGAGCAAGTGAAGCTATGGCATGGATGCAAGATCCTGATAATTTTAA 238 consensus_2398#1 AGAAAAAGCAGTTGGTG-ATATGGAACGGGGTGTAGAAATCAGGCGTTTTATAAT--AGG 183 *** *** * * * ** * * * * * ** * * ***** consensus_2398#0 AGAAATGAAAAATAGTTTTAATTTAACCAGTAGATTTGCACGTTTGACAAAGATTAATAT 298 consensus_2398#1 AGAGGCTGGAAATTNCCTTGATT-ATCTTTCCAATTTGC-CATATAAAGATTATGATTAT 241 *** **** ** *** * * ****** * * * * * ** * *** consensus_2398#0 A-CGTATTGCTGGCAGGCATTTGTTTATTCGTTTTGTAGCAACTACTGGTGACGCTATGG 357 consensus_2398#1 AGTAAAGTATTAGGAGCTTGTTGTGAGAATGTCATGGGATATGTACCAGTACCACT-TGG 300 * * * * * ** **** ** ** * *** ** * ** *** consensus_2398#0 GAATG--AATATGTTATCTAAAGGAACTGAAAAATCATTAAATACAGTGAAAGAACATTT 415 consensus_2398#1 AATTGCTGGTCCATTATTACTTGATGGTG------------------------------- 329 * ** * **** * ** consensus_2398#0 TCCTGATATGGAAATATTATCATTAAGCGGTAATTTTTGCACGGATAAAAAGCCAGCAGC 475 consensus_2398#1 ------------------------------------------------------------ consensus_2398#0 AGTAAATTGGGTTTGTGGTAGAGGCAAAAGTGTGGTTTGCGAAGCAGTTGTACCTGCAGA 535 consensus_2398#1 ------------------------------------------------------------ consensus_2398#0 TATTGTTACAAATGTGTTAAAAACATCTGTTCATGCTTTAGNTGATGTGAATATAAGTAA 595 consensus_2398#1 ------------------------------------------------------------ consensus_2398#0 AAATATGATT 605 consensus_2398#1 ---------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |