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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_268#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 926 fasta sequence
[ATTCGCTCCTGCTGGTTTGACTACTGAAGTCAAATCTGTTGAAATGCATCACGAAGCTTNNNAGAGGCTGTTCCTGGTGATAATGTTGGTTTTAACGTCAAGAACGTATCTGTCAAAGAATTACGTCGTGGTTATGTTGCTGGTGATTCAAAGAATAATCCACCTAAAGGTGCTGCTGATTTTACTGCACAAGTTATTGTATTGAATCACCCTGGTCAAATCAGCAATGGTTATACACCAGTATTGGATTGTCATACTGCACATATTGCATGTAAATTCGCTGATATCAAAGAGAAATGCGATCGTCGTAATGGAAAGACAACTGAAGAAAATCCGAAAAGCATCAAATCTGGAGATGCTGCCATCGTTATGCTTGTGCCAAGCAAGCCTATGTGCGTTGAGGCTTTCCAAGAATTTCCGCCTTTGGGGCGTTTCGCTGTTCGTGACATGCGTCAAACGGTAGCTGTTGGTGTTATCAAAGCTGTAACTTTCAAGGACGCTGCTGGCAAGGTCACCAAGGCTGCCGAGAAGGCTCAGAAAAAGAAATAACTAGTTTCCGTACATGTGTATCGCCAGACGGGCTTCGGCGTATAGTAGCTGAAGTAGTTTACCTTCTTTCTTCACGTTTCTCGCACGAGAGCAACGCTACATTATTGCCATTGGAGACTGAAATATTTTCAACGAAATCGCGACTAATGATTAAGAGTAATAAAATCGGTAAAGAATCGCGACGACTGGCATTTATTGTGCATGTAATTGCACGTTCGCCATATTTTTTTGATATTCGTATATTCCATTTATCAAAATGNNNACTCCGTCACTTTTCTCACCGTAAAGAATTTCGTAGGAAAGGTAAGAATGATCGACAATGGTATATAAGCAATGCTTTTCTCGCTTCGCGAGTTCCATGAGAAAAGAAAGTGAAC]
[+] EMBL BI509873 [ATTCGCTCCTGCTGGTTTGACTACTGAAGTCAAATCTGTTGAAATGCATCACGAAGCTTNNNAGAGGCTGTTCCTGGTGATAATGTTGGTTTTAACGTCAAGAACGTATCTGTCAAAGAATTACGTCGTGGTTATGTTGCTGGTGATTCAAAGAATAATCCACCTAAAGGTGCTGCTGATTTTACTGCACAAGTTATTGTATTGAATCACCCTGGTCAAATCAGCAATGGTTATACACCAGTATTGGATTGTCATACTGCACATATTGCATGTAAATTCGCTGATATCAAAGAGAAATGCGATCGTCGTAATGGAAAGACAACTGAAGAAAATCCGAAAAGCATCAAATCTGGAGATGCTGCCATCGTTATGCTTGTGCCAAGCAAGCCTATGTGCGTTGAGGCTTTCCAAGAATTTCCGCCTTTGGGGCGTTTCGCTGTTCGTGACATGCGTCAAACGGTAGCTGTTGGTGTTATCAAAGCTGTAACTTTCAAGGACGCTGCTG ]
[+] EMBL BI509053 [ TATACACCAGTATTGGATTGTCATACTGCACATATTGCATGTAAATTCGCTGATATCAAAGAGAAATGCGATCGTCGTAATGGATAGACAACTGAAGAAAATCCGAAAAGCATCAAATCTGGAGATGCTGCCATCGTTATGCTTGTGCCAAGCAAGCCTATGTGCGTTGAGGCTTTCCAAGAATTTCCGCCTTTGGGGCGTTTCGCTGTTCGTGACATGCGTCAAACGGTAGCTGTTGGTGTTATCAAAGCTGTAACTTTCAAGGACGCTGCTGGCAAGGTCACCAAGGCTGCCGAGAAGGCTCAGAAAAAGAAATAACTAGTTTCCGTACATGTGTATCGCCAGACGGGCTTCGGCGTATAGTAGCTGAAGTAGTTTACCTTCTTTCTTCACGTTTCTCGCACGAGAGCAACGCTACATTATTGCCATTGGAGACTGAAATATTTTCAACGAAATCGCGACTAATGATTAAGAGTAATAAAATCGGTAAAGAATCGCGACGACTGGCATTTATTGTGCATGTAATTGCACGTTCGCCATATTTTTTTGATATTCG ]
[+] EMBL BI505418 [ CTGGAGATGCTGCCATCGTTATGCTTGTGCCAAGCAAGCCTATGTGCGTTGAGGCTTTCCAAGAATTTCCGCCTTTGGGGCGTTTCGCTGTTCGTGACATGCGTCAAACGGTAGCTGTTGGTGTTATCAAAGCTGTAACTTTCAAGGACGCTGCTGGCAAGGTCACCAAGGCTGCCGAGAAGGCTCAGAAAAAGAAATAACTAGTTTCCGTACATGTGTATCGCCAGACGGGCTTCGGCGTATAGTAGCTGAAGTAGTTTACCTTCTTTCTTCACGTTTCTCGCACGAGAGCAACGCTACATTATTGCCATTGGAGACTGAAATATTTTCAACGAAATCGCGACTAATGATTAAGAGTAATAAAATCGGTAAAGAATCGCGACGACTGGCATTTATTGTGCATGTAATTGCACGTTCGCCATATTTTTTTGATATTCGTATATTCCATTTATCAAAATGGTTACTCCGTCACTTTTCTCACCGTAAAGAATTTCGTAGGAAAGGTAAGAATGAT ]
[+] EMBL BI507510 [ AGTTTCCGTACATGTGTATCGCCAGACGGGCTTCGGCGTATAGTAGCTGAAGTAGTTTACCTTCTTTCTTCACGTTTCTCGCACGAGAGCAACGCTACATTATTGCCATTGGAGACTGAAATATTTTCAACGAAATCGCGACTAATGATTAAGAGTAATAAAATCGGTAAAGAATCGCGACGACTGGCATTTATTNNGCATGTAATTGCACGTTCGCCATATTTTTTTGATATTCGTATATTCCATTTATCAAAATGNNNACTCCGTCACTTTTCTCACCGTAAAGAATTTCGTAGGAAAGGTAAGAATGATCGACAATGGTATATAAGCAATGCTTTTCTCGCTTCGCGAGTTCCATGAGAAAAGAAAGTGAAC]
consensusID : consensus_268#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence
[TGTTATTTATATGTATGTACAGAAAACCGTTGTTAACCAATTTCAATCGGAAAATTGCGGATAAAAGTGCTGAACCATTGTAGATCATATTTCCGCACATACTTTTTTTTAACATATAATGTGTAAAAAGATAAGGTAAATCTTTGTAAAGACATATATCGTAGAAAAATGTTGTGTATATAGTATAGCAGTTCAATTCCTCACCTAGTCAGGTAATTGGAAAGTAATAAAAAAACAGGTCCCATTTTCTCCCAACCAAATTCGTATTGGAACTACTACTTTTTCTTTTTCTGTTATTCAATCTTTTTTTTTTTTTTTTTATATCGATGTATCCCAACTCATAGTTAAAAATTTAAAAAATTGTTAATATTCTTCAATTAATTTTTTACAAATAATATCAGAAATATGAAGCATTTTACAATAAGGATGGCGATGATTAATTAATAATGACGGCAAAAAAATAATAATGAATGTTTTTCGAATATCGCAGATATAGGATTTATTTCCGTATAATAATTAGAAAATATAATTAAGCCGAGCTAAATTATGTTTTTGATGTTTTCATGTGAAACAGATATTACAAGTAGCTTTCCATAGTTCACTTTCTTTTCTCATGGAACTCGCGAAGCGAGAAAAGCATTGCTTATATACCATTGTCGATCATTCTTACCTTTCCTA]
[+] EMBL BE844378 [TGTTATTTATATGTATGTACAGAAAACCGTTGTTAACCAATTTCAATCGGAAAATTGCGGATAAAAGTGCTGAACCATTGTAGATCATATTTCCGCACATACTTTTTTTTAACATATAATGTGTAAAAAGATAAGGTAAATCTTTGTAAAGACATATATCGTAGAAAAATGTTGTGTATATAGTATAGCAGTTCAATTCCTCACCTAGTCAGGTAATTGGAAAGTAATAAAAAAACAGGTCCCATTTTCTCCCAACCAAATTCGTATTGGAACTACTACTTTTTCTTTTTCTGTTATTCAATCTTTTTTTTTTTTTTTTTATATCGATGTATCCCAACTCATAGTTAAAAATTTAAAAAATTGTTAATATTCTTCAATTAATTTTTTACAAATAATATCAGAAATATGAAGCATTTTACAATAAGGATGGCGATGATTAATTAATAATGACGGCAAAAAAATAATAATGAATGTTTTTCGAATATCGCAGATATAGGATTTATTTCCGTATAATAATTAGAAAATATAATTAAGCCGAGCTAAATTATGTTTTTGATGTTTTCATGTGAAACAGATATTACAAGTAGCTTTCCATAGTTCACTTTCTTTTCTCATGGAACTCGCGAAGCGAGAAAAGCATTGCTTATATACCATTGTCGATCATTCTTACCTTTCCTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_268#0 ATTCGCTCCTGCTGGTTTGACTACTGAAGTCAAATCTGTTGAAATGCATCACGAAGCTTN 60
consensus_268#1 ------------------------------------------------------------
consensus_268#0 NNAGAGGCTGTTCCTGGTGATAATGTTGGTTTTAACGTCAAGAACGTATCTGTCAAAGAA 120
consensus_268#1 -----------------------------------TGTTATTTATATGTATGTACAGAAA 25
** * * * * *** * **
consensus_268#0 TTACGTCGTGGTTATGTTGCTGGTGATTCAAAGAATAATCCACCTAAAGGTGCTGCTGAT 180
consensus_268#1 ----ACCGTTGTTAACCAATT--TCAATCGGAAAAT--TGCGGATAAAAGTGCTGA---- 73
*** **** * * * ** * *** * * **** ******
consensus_268#0 TTTACTGCACAAGTTATTGTATTGAATCACCCTGGTCAAATCAGCAATGGTTATACACCA 240
consensus_268#1 ACCATTGTAGATCATATTTCCGCACAT-ACTTTTTTTTAACATATAATGTGTAAAAAGAT 132
* ** * * **** ** ** * * ** **** ** * *
consensus_268#0 GTATTGGATTGTCATACTG-CACATATTGCATGTAAAT-TCGCTGATATCAAAGAGAAAT 298
consensus_268#1 AAGGTAAATCTTTGTAAAGACATATATCGTAGAAAAATGTTGTGTATATAGTATAGCAGT 192
* ** * ** * ** **** * * **** * * **** * ** * *
consensus_268#0 GCGATCGTCGTAATGGAAAGACAACTGAAGAAAATCCGAAAAGCATCAAATCTGGAGATG 358
consensus_268#1 TCAATTCCTCACCTAGTCAGGTAATTGGAAAGTAATAAAAAAACA---GGTCCC-ATTTT 248
* ** * * ** ** ** * * * **** ** ** * *
consensus_268#0 CTGCCATCGTTATGCTTGTGCCAAGCAAGCCTATGTGCGTTGAGGCTTTCCAAGAATTTC 418
consensus_268#1 CTCCCAACCAAATTCGTATTGGAACTACTACTTTTTCTTTTTCTGTTATTCAATCTTTTT 308
** *** * ** * * * ** * ** * * ** * * * *** ***
consensus_268#0 CGCCTTTGGGGCGTTTCGCTGT-TCGTGACATGC-GTCAAACGGT-----AGCTGTTGGT 471
consensus_268#1 TTTTTTTTTTTTATATCGATGTATCCCAACTCATAGTTAAAAATTTAAAAAATTGTTAAT 368
*** * *** *** ** ** ** *** * * **** *
consensus_268#0 GTTATCAAAGCTGTAACTTTCAAGGACGCTGCTGGCAAGGTCACCAAGGCTGCCGAGAAG 531
consensus_268#1 ATTCTTCAA--TTAATTTTTTACAAATAATATCAGAAATATGAAGCATTTTAC-AATAAG 425
** * ** * * *** * * * * ** * * * * * * ***
consensus_268#0 GCTCAGAAAAAGAAATAACTAGTTTCCGTACATGTGTATCGCCAGACGGGCTTCGGCGTA 591
consensus_268#1 GATGGCGATGATTAATTAATAATGACGGCAAAAAAATAATAATGAATGTTTTTCGA-ATA 484
* * * * *** * ** * * * * * ** * * **** **
consensus_268#0 TAGTAGCTGAAGTAGTTTACCTTCTTTCTTCACGTTTCTCGCACGA--GAGCAACGCTAC 649
consensus_268#1 TCGCAGATATAGGA-TTTATTTCCGTATAATAATTAGAAAATATAATTAAGCCGAGCTAA 543
* * ** * ** * **** * * * * * * * *** ****
consensus_268#0 ATTATTGCCATTGGAGACTGAAATATTTTCAACGAA-ATCGCGACTAATGATTAAGAGT- 707
consensus_268#1 ATTAT-GTTTTTGATGTTTT---CATGTGAAACAGATATTACAAGTAGCTTTCCATAGTT 599
***** * *** * * ** * *** * ** * * ** * * ***
consensus_268#0 -AATAAAATCGGTAAAGAA--TCGCGACGACTGGCATTTATTGTGCATGTA--ATTGCAC 762
consensus_268#1 CACTTTCTTTTCTCATGGAACTCGCGAAGCGAGAAAAGCATTGCTTATATACCATTGTCG 659
* * * * * * * ****** * * * **** ** ** ****
consensus_268#0 GTTCGCCATATTTTTTTGATATTCGTATATTCCATTTATCAAAATGNNNACTCCGTCACT 822
consensus_268#1 ATCATTCTTACCTTTCCTA----------------------------------------- 678
* * ** *** *
consensus_268#0 TTTCTCACCGTAAAGAATTTCGTAGGAAAGGTAAGAATGATCGACAATGGTATATAAGCA 882
consensus_268#1 ------------------------------------------------------------
consensus_268#0 ATGCTTTTCTCGCTTCGCGAGTTCCATGAGAAAAGAAAGTGAAC 926
consensus_268#1 --------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |