These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2787#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 487 fasta sequence [GGTAGTACTACAAATCAAATGGGATCTGGTAGTAATCAAATGGGACCAGGTGGTCCAAGTAATCAGCTTAGTCATGGTGGTGCAACCAATCAAATGGGATTAAGTGGACCAGCTGGACAATCACCTTCTGGTCAAATGGGACCTGGTTCACAAAATCAACAAATTATACCTGGAGGTTCAGCGCCAATTGTACCTAATGCACCTGTAAATCAAATGAGTCAGACTGGACCTGGTCAGATTGGTCCTACTGGACCTGGAGGTCCACCTGGTTCTGGACAGGAAAATTTAAATGCTTTACAAAAAGCTATTGATTCAATGGAAGAAAAAGGACTTCAAGAAGATCCGCGTTATTCACAATTACTTGCATTAAGAGCGCGTCAAGGCAATATGGGAGAAAAACAAACTTTGAGTTCACAACAATTACAACAATTACGNGTTCAGATAATGGCATATCGATTATTAGCAAGAAATCAACCATTATCACAAC] [+] EMBL BI510696 [GGTAGTACTACAAATCAAATGGGATCTGGTAGTAATCAAATGGGACCAGGTGGTCCAAGTAATCAGCTTAGTCATGGTGGTGCAACCAATCAAATGGGATTAAGTGGACCAGCTGGACAATCACCTTCTGGTCAAATGGGACCTGGTTCACAAAATCAACAAATTATACCTGGAGGTTCAGCGCCAATTGTACCTAATGCACCTGTAAATCAAATGAGTCAGACTGGACCTGGTCAGATTGGTCCTACTGGACCTGGAGGTCCACCTGGTTCTGGACAGGAAAATTTAAATGCTTTACAAAAAGCTATTGATTCAATGGAAGAAAAAGGACTTCAAGAAGATCCGCGTTATTCACAATTACTTGCATTAAGAGCGCGTCAAGGCAATATGGGAGAAAAACAAACTTTGAGTTCACAACAATTACAACAATTACGNGTTCAGATAATGGCATATCGATTATTAGCAAGAAATCAACCATTATCACAAC] consensusID : consensus_2787#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 392 fasta sequence [CAACAATTACAACAATTACGAGTTCAGATAATGGCATATCGATTATTAGCAAGAAATCAACCATTATCACAACAACTTGCACTTGCAGTCCAAGGTGGAGCTCCTCCTCCTTCACCTATGGGGCAACGAACTCCTATAGATCCATCTCAAGGGCCTACTGCTGCTACAGGTCCACAAATCACAGGACCAAACGTAATTGGTTCTACAGTTCCTCCAAGACCAAGCTGTCAGACACCACAACAACAACAACAACCTCCTCAACCAGGTGCTAAAACTAATAGGGTGACAAGTGTCACAAAACCAGCTGGTTTAGATCCATTGTTAATTTTACAAGAACGTGAAAACAGAGTGGCAGCACGTATAGCATTACGAATGGAACAATTGAGCAATTT] [+] EMBL BI516624 [CAACAATTACAACAATTACGAGTTCAGATAATGGCATATCGATTATTAGCAAGAAATCAACCATTATCACAACAACTTGCACTTGCAGTCCAAGGTGGAGCTCCTCCTCCTTCACCTATGGGGCAACGAACTCCTATAGATCCATCTCAAGGGCCTACTGCTGCTACAGGTCCACAAATCACAGGACCAAACGTAATTGGTTCTACAGTTCCTCCAAGACCAAGCTGTCAGACACCACAACAACAACAACAACCTCCTCAACCAGGTGCTAAAACTAATAGGGTGACAAGTGTCACAAAACCAGCTGGTTTAGATCCATTGTTAATTTTACAAGAACGTGAAAACAGAGTGGCAGCACGTATAGCATTACGAATGGAACAATTGAGCAATTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2787#0 GGTAGTACTACAAATCAAATGGGATCTGGTAGTAATCAAATGGGACCAGGTGGTCCAAGT 60 consensus_2787#1 -----------------------------CAACAATTACA-ACAATTACG-AGTTCAGAT 29 * *** * * * * * ** ** * consensus_2787#0 AATCAGCTTAGTCATGGTGGTGCAACCAATCAAATGGGATTAAGTGGACCAGCTGGACAA 120 consensus_2787#1 AAT-GGCATATCGATTATTA-GCAAGAAATCAACCATTATCA---CAACAACTTGCACTT 84 *** ** ** ** * **** ****** ** * ** * ** ** consensus_2787#0 TCACCTTCTGGTCAAATGGGACCTGGTTCACAAAATCAACAAATTATACCTGGAGGTTCA 180 consensus_2787#1 GCAGTCCAAGGTGGAGCTCCTCCTCCTTCACCTATGGGGCAACGAACTCCTATAGATCCA 144 ** *** * *** ***** * *** * *** ** * ** consensus_2787#0 GCGCCAATTGTACCTAATGCACCTGTAAATCAAATGAGTCAGACTGGACCTGGTCAGATT 240 consensus_2787#1 TCTCAA---GGGCCTACTGCTGCTACAGGTCCA-CAAATCACA--GGACCAAACGTAATT 198 * * * * **** *** ** * ** * * *** * ***** *** consensus_2787#0 GGTCCTACTGGACCTGGAGGTCCACCTGGTT---CTGGACAGGAAAATTTAAATGCTTTA 297 consensus_2787#1 GGTTCTACAGTTCCTCCAAGACCAAGCTGTCAGACACCACAACAACAACAACAACCTCCT 258 *** **** * *** * * *** ** * *** ** * * * ** consensus_2787#0 CAAAAAGCTATTGATTC-AATGGAAGAAAAAGGACTTCAAGAAGATCCGCGTTATTCACA 356 consensus_2787#1 CAACCAGGTGCTAAAACTAATAGGGTGACAAGTGTCACAAAACCAGCTGGTTTAGATCCA 318 *** ** * * * * *** * * *** *** * * * * *** ** consensus_2787#0 ATTACTTGCATTAAGAGCGCGTCAAGGCAATATGGGAGAAAAACAAACTTTGAGTTCACA 416 consensus_2787#1 -TTGTTAATTTTACAAGAACGTGAAAACAGAGTGGCAGCACGTATAGCATTACGAATGGA 377 ** * *** ** *** ** ** *** ** * * * ** * * consensus_2787#0 ACAATTACAACAATTACGNGTTCAGATAATGGCATATCGATTATTAGCAAGAAATCAACC 476 consensus_2787#1 ACAATTG-AGCAATTT-------------------------------------------- 392 ****** * ***** consensus_2787#0 ATTATCACAAC 487 consensus_2787#1 ----------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |