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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_491#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 548 fasta sequence
[TCGTTGGATAAAAGAACAAAGCGTCGCTTTTTATAACGTGTTGCTGCGAAAATATATATGTATATATATGTGCGCATAGAGCTGCATACTGTATCGCATGTGCAGATGCAAAGGTCTGCGAAACACAGGAAAACGCAGGATGGGCACCGTACTTGATCGCGGTATCTATTCGATCAATCGTGGTAATTCGATCGAATCCTCGCCAATTTGTCACTTCTTTTCAACTTCAACGTGTCGAAATTAATCCTTTCGGCACAAAGACATTTAGTTAGCTCTTATATCTGGAGCTATATCTTGCAGGGAGACGAGATTGAGTTGAAATAAATTCAGATCGAATAGTGAAAGAAAAGATTTTTGCAATTATATTAATCTTCCAAGCTAATCAACTGATCTATTATCGAGGATGTTCGATCGTATCGCGATCGATCAAAGATTATATATATATAATAACGTTTTGTAAAATTCTTCGATGCACGCGATATTTGTATAAAAAAAAAAAAAGTGAAAGNANACATACAGAGAGACAAATACGTACGTTAGAAGTGCAT]
[+] EMBL BI503882 [TCGTTGGATAAAAGAACAAAGCGTCGCTTTTTATAACGTGTTGCTGCGAAAATATATATGTATATATATGTGCGCATAGAGCTGCATACTGTATCGCATGTGCAGATGCAAAGGTCTGCGAAACACAGGAAAACGCAGGATGGGCACCGTACTTGATCGCGGTATCTATTCGATCAATCGTGGTAATTCGATCGAATCCTCGCCAATTTGTCACTTCTTTTCAACTTCAACGTGTCGAAATTAATCCTTTCGGCACAAAGACATTTAGTTAGCTCTTATATCTGGAGCTATATCTTGCAGGGAGACGAGATTGAGTTGAAATAAATTCAGATCGAATAGTGAAAGAAAAGATTTTTGCAATTATATTAATCTTCCAAGCTAATCAACTGATCTATTATCGAGGATGTTCGATCGTATCGCGATCGATCAAAGATTATATATATATAATAACGTTTTGTAAAATTCTTCGATGCACGCGATATTTGTATAAAAAAAAAAAAAGTGAAAGNANACATACAGAGAGACAAATACGTACGTTAGAAGTGCAT]
[+] EMBL BI504831 [TCGTTGGATAAAAGAACAAAGCGTCGCTTTTTATAACGTGTTGCTGCGAAAATATATATGTATATATATGTGCGCATAGAGCTGCATACTGTATCGCATGTGCAGATGCAAAGGTCTGCGAAACACAGGAAAACGCAGGATGGGCACCGTACTTGATCGCGGTATCTATTCGATCAATCGTGGTAATTCGATCGAATCCTCGCCAATTTGTCACTTCTTTTCAACTTCAACGTGTCGAAATTAATCCTTTCGGCACAAAGACATTTAGCTAGCTCCTATATCTGGAGCTATATCTTGCAGGGAGACGAGATTGAGTTGAAATAAATTCAGATCGAATAGTGAAAGAAAAGATTTTTGCAATTATATTAATCTTCCAAGCTAATCAACTGATCTATTATCGAGGATGTTCGATCGTATCGCGATCGATCAAAGATTATATATATATAATAACGTTTTGTAAAATTCTTCGATGCACGCGATATTTGTATAAAAAAAAA ]
[+] EMBL BI509576 [TCGTTGGATAAAAGAACAAAGCGTCGCTTTTTATAACGTGTTGCTGCGAAAATATATATGTATATATATGTGCGCATAGAGCTGCATACTGTATCGCATGTGCAGATGCAAAGGTCTGCGAAACACAGGAAAACGCAGGATGGGCACCGTACTTGATCGCGGTATCTATTCGATCAATCGTGGTAATTCGATCGAATCCTCGCCAATTTGTCACTTCTTTTCAACTTCAACGTGTCGAAATTAATCCTNNNGGCACAAAGACATTTAGTTAGCTCTTATATCTGGAGCTATATCTTGCAGGGAGACGAGATTGAGTTGAAATAAATTCAGATCGAATAGTGAAAGAAAAGATTTTTGCAATTATATTAATCTTCCAAGCTAATCAACTGATCTATTATCGAGGATGTTCGATCGTATCGCGATCGATCAAAGATTATATATATATAATAACGTTTTGTAAAATTCTTCGATGCACGCGATATTTGTATAAAA ]
consensusID : consensus_491#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence
[AAAGAACAAAGCGTCGCTTTTTATAACGTGTTGCTGCGAAAATATATATGTATATATATGTGCGCATAGAGCTGCATACTGTATCGCATGTGCAGATGCAAACTAGCGAAACACAGGAAAACGCAGGATGGGCACCGTACTTGATCGCGGTATCTATTCGATCAATCGTGGTAATTCGATCGAATCCTCGCCAATTTGTCACTTCTTTTCAACTTCAACGTGTCGAAATTAATCCTTTCGGCACAAAGACATTTAGTTAGCTCTTATATCTGGAGCTATATCTTGATACACTTTGCAGGGAGACGAGATTGAGTTGAAATAAATTCAGATCGAATAGTGAAAGGATTTTTGCAATTACATTAATCTTCCAAGCTAATCAACTGATCTATTATCGAGAATGTTCGATCGTATCGCGATCGATCAAAGATTATATATATATATAATAACGTTTTGTAAAATCCTTCGATGCACGCGATATTTGTATAAAAAAAA]
[+] EMBL BI514632 [AAAGAACAAAGCGTCGCTTTTTATAACGTGTTGCTGCGAAAATATATATGTATATATATGTGCGCATAGAGCTGCATACTGTATCGCATGTGCAGATGCAAACTAGCGAAACACAGGAAAACGCAGGATGGGCACCGTACTTGATCGCGGTATCTATTCGATCAATCGTGGTAATTCGATCGAATCCTCGCCAATTTGTCACTTCTTTTCAACTTCAACGTGTCGAAATTAATCCTTTCGGCACAAAGACATTTAGTTAGCTCTTATATCTGGAGCTATATCTTGATACACTTTGCAGGGAGACGAGATTGAGTTGAAATAAATTCAGATCGAATAGTGAAAGGATTTTTGCAATTACATTAATCTTCCAAGCTAATCAACTGATCTATTATCGAGAATGTTCGATCGTATCGCGATCGATCAAAGATTATATATATATATAATAACGTTTTGTAAAATCCTTCGATGCACGCGATATTTGTATAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_491#0 TCGTTGGATAAAAGAACAAAGCGTCGCTTTTTATAACGTGTTGCTGCGAAAATATATATG 60
consensus_491#1 ----------AAAGAACAAAGCGTCGCTTTTTATAACGTGTTGCTGCGAAAATATATATG 50
**************************************************
consensus_491#0 TATATATATGTGCGCATAGAGCTGCATACTGTATCGCATGTGCAGATGCAAAGGTCTGCG 120
consensus_491#1 TATATATATGTGCGCATAGAGCTGCATACTGTATCGCATGTGCAGATGCAAA--CTAGCG 108
**************************************************** ***
consensus_491#0 AAACACAGGAAAACGCAGGATGGGCACCGTACTTGATCGCGGTATCTATTCGATCAATCG 180
consensus_491#1 AAACACAGGAAAACGCAGGATGGGCACCGTACTTGATCGCGGTATCTATTCGATCAATCG 168
************************************************************
consensus_491#0 TGGTAATTCGATCGAATCCTCGCCAATTTGTCACTTCTTTTCAACTTCAACGTGTCGAAA 240
consensus_491#1 TGGTAATTCGATCGAATCCTCGCCAATTTGTCACTTCTTTTCAACTTCAACGTGTCGAAA 228
************************************************************
consensus_491#0 TTAATCCTTTCGGCACAAAGACATTTAGTTAGCTCTTATATCTGGAGCTATATCTTG--- 297
consensus_491#1 TTAATCCTTTCGGCACAAAGACATTTAGTTAGCTCTTATATCTGGAGCTATATCTTGATA 288
*********************************************************
consensus_491#0 -------CAGGGAGACGAGATTGAGTTGAAATAAATTCAGATCGAATAGTGAAAGAAAAG 350
consensus_491#1 CACTTTGCAGGGAGACGAGATTGAGTTGAAATAAATTCAGATCGAATAGTGAAAG----G 344
************************************************ *
consensus_491#0 ATTTTTGCAATTATATTAATCTTCCAAGCTAATCAACTGATCTATTATCGAGGATGTTCG 410
consensus_491#1 ATTTTTGCAATTACATTAATCTTCCAAGCTAATCAACTGATCTATTATCGAGAATGTTCG 404
************* ************************************** *******
consensus_491#0 ATCGTATCGCGATCGATCAAAGATTATATATATATA--ATAACGTTTTGTAAAATTCTTC 468
consensus_491#1 ATCGTATCGCGATCGATCAAAGATTATATATATATATAATAACGTTTTGTAAAATCCTTC 464
************************************ ***************** ****
consensus_491#0 GATGCACGCGATATTTGTATAAAAAAAAAAAAAGTGAAAGNANACATACAGAGAGACAAA 528
consensus_491#1 GATGCACGCGATATTTGTATAAAAAAAA-------------------------------- 492
****************************
consensus_491#0 TACGTACGTTAGAAGTGCAT 548
consensus_491#1 --------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |