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Apis mellifera
cluster # 5 cluster # 5       Sequences # 22       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5#0 length = 790 sequences # 20  
consensus_5#1 length = 466 sequences # 1  
consensus_5#2 length = 165 sequences # 1  

consensusID : consensus_5#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 790
fasta sequence
                              [CGAATAGTGATTCTGCATAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACTTTAATAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAG-AAAAAAAAAAAAAGAAAGAAATTTCTATACTTTATTAAAACTGTCATTTATGTAAAAATATTACATTTTTTAAAACTAAAAACTTGTTTTGTAATAAACATGGTATATGTAATTTAAAATCGTAATATTAATTATA]

[+] EMBL BI516686             [CGAATAGTGATTCTGCATAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACTTTAATAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGNCTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI510747             [               CATAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACTTTAATAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI506758             [                                                                    CCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTNNNTTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTAT                                                                                                                                                                                              ]
[+] EMBL BI513698             [                                                                                    GTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGNTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAG                                                                                                                                                                                                                                   ]
[+] EMBL BI509088             [                                                                                    GTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAGAAAAAAAAAAAAAAGAAAGAAATTTCTATACTTTATTAAAACTGTCATTTAT                                                                                     ]
[+] EMBL BI514377             [                                                                                    GTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTNNNCTATTTTTCTATCCATTNGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI517205             [                                                                                                   GAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTAT                                                                                                                                                                                              ]
[+] EMBL BI512083             [                                                                                                   GAGGTACTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGA                                                                                                                                                                   ]
[+] EMBL BI511543             [                                                                                                         CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAA                                                                                                                                                                  ]
[+] EMBL BI513417             [                                                                                                         CTGCAGTTGTGAATGGNGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGNCTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATNAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGANNNAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTAC                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI517017             [                                                                                                         CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAANNGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCNNTTGGGAGNTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTA                                                                                                                                                                                               ]
[+] EMBL BI515590             [                                                                                                         CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAG                                                                                                                                                                    ]
[+] EMBL BI508304             [                                                                                                          TGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAA                                                                                                                                                                  ]
[+] EMBL BI511116             [                                                                                                             AGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAA                                                                                                                                                                                                                                              ]
[+] EMBL BI514212             [                                                                                                                   GAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCNNTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCNNGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAA                                                                                                                                                                     ]
[+] EMBL BI514438             [                                                                                                                   GAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAA                                                                                                                                                                     ]
[+] EMBL BI503591             [                                                                                                                   GAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAG AAAAAAAAAAAAANNNNGAAATTTCTATACTTTATTAAAACTGTCATTTATGTAAAAATATTACATTTTTTAAAACTAAAAACTTGTTTTGTAATAAACATGGTATATGTAATTTAAAATCGTAATATTAATTATA]
[+] EMBL BI511464             [                                                                                                                        GAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTATGAAACCTGATGTAGTTGGTTCTAAAGAATA                                                                                                                                                                ]
[+] EMBL BI510827             [                                                                                                                               TAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTA                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BI513008             [                                                                                                                                AAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCNNGAAAGAAAACTATGAAACCTGATGTAATTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAG AAAGAAAAAAAAAGAAAGAAATTTCT                                                                                                              ]


>consensus_5#0 CGAATAGTGATTCTGCATAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACTTTAA TAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTGAATG GAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCT ATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTG ATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTC ATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTC TTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTG GAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTACTA TCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGCATTCC AATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAAAACTA TGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAGAAAAAA AAAAAAAGAAAGAAATTTCTATACTTTATTAAAACTGTCATTTATGTAAAAATATTACAT TTTTTAAAACTAAAAACTTGTTTTGTAATAAACATGGTATATGTAATTTAAAATCGTAAT ATTAATTATA



consensusID : consensus_5#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 466
fasta sequence
                              [CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTGTACGTATTTTAATTCATAATTTTGTATGTGTATTTAATGATATAATTTTTTAATTATGTATCATATGTCAAAAAATGATAATTTATTTTGCAGTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTA]

[+] EMBL BI515125             [CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTTTTCTATCCATTAGACTTGTACGTATTTTAATTCATAATTTTGTATGTGTATTTAATGATATAATTTTTTAATTATGTATCATATGTCAAAAAATGATAATTTATTTTGCAGTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGATAAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTA]


>consensus_5#1 CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATC TTGTTCTATTTTTCTATCCATTAGACTTGTACGTATTTTAATTCATAATTTTGTATGTGT ATTTAATGATATAATTTTTTAATTATGTATCATATGTCAAAAAATGATAATTTATTTTGC AGTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGTGCTGATGAATTTGAA CAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTCAGTCATTTAGCATGG GTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCTGAT AAAAGTTCTAAAATCGCACGTGATTATGGCGTACTTGATGAAGAAAGTGGAGTTCCATTT CGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAATTA



consensusID : consensus_5#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 165
fasta sequence
                              [GATCGAGCTGATGAATTTGAACGAATTGGTTGTAAACTCATNGCAGCATNGACTNATTCTCACNTCAGTCATTTAGNANGGGNNNACACNCCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCNGATAAAAGTTANNGGNGTAGGGCAGGG]

[-] EMBL BG101596             [GATCGAGCTGATGAATTTGAACGAATTGGTTGTAAACTCATNGCAGCATNGACTNATTCTCACNTCAGTCATTTAGNANGGGNNNACACNCCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATTCCTCTTCTTGCNGATAAAAGTTANNGGNGTAGGGCAGGG]


>consensus_5#2 GATCGAGCTGATGAATTTGAACGAATTGGTTGTAAACTCATNGCAGCATNGACTNATTCT CACNTCAGTCATTTAGNANGGGNNNACACNCCACGTAAGCAAGGTGGTCTTGGTGAAATG AACATTCCTCTTCTTGCNGATAAAAGTTANNGGNGTAGGGCAGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5#1      CTGCAGTTGTGAATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATC 60
consensus_5#2      ------------------------------------------------------------
consensus_5#0      --CGAATAGTGATTCTGCA--TAAAATACAATTTTGTTACAAAATAAAAGAAACAAAACT 56
                                                                               

consensus_5#1      TTGTT--CTATTTTTCTATCCATTAGACTTGTACGTATTTTAATTCATAATTTTGT-ATG 117
consensus_5#2      ------------------------------------------------------------
consensus_5#0      TTAATAATGGTCCCACAACTTCAAAAACGTGCACCTGATTTTCGAGGTACTGCAGTTGTG 116
                                                                               

consensus_5#1      TGTATTTAATGATATAATTTTTTAATTATGTATCATATGTCAAAAAATGATAATTTATTT 177
consensus_5#2      ------------------------------------------------------------
consensus_5#0      AATGGAGAATTTAAAGATATTTCTCTTTCCGATTATCAAGGAAAATATCTTGTTCTATTT 176
                                                                               

consensus_5#1      TGCAGT------------ACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGT 225
consensus_5#2      ------------------------------------------------------GATCGA 6
consensus_5#0      TTCTATCCATTAGACTTTACATTTGTTTGCCCCACTGAAATCATTGCCTTTTCTGATCGT 236
                                                                         ***** 

consensus_5#1      GCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTC 285
consensus_5#2      GCTGATGAATTTGAACGAATTGGTTGTAAACTCATNGCAGCATNGACTNATTCTCACNTC 66
consensus_5#0      GCTGATGAATTTGAACAAATTGGTTGTAAACTCATTGCAGCATCTACTGATTCTCACTTC 296
                   **************** ****************** *******  *** ******** **

consensus_5#1      AGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATT 345
consensus_5#2      AGTCATTTAGNANGGGNNNACACNCCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATT 126
consensus_5#0      AGTCATTTAGCATGGGTAAACACACCACGTAAGCAAGGTGGTCTTGGTGAAATGAACATT 356
                   ********** * ***   **** ************************************

consensus_5#1      CCTCTTCTTGCTGATAAAAGTT-CTAAAATCGCACGTGATTATGGCGTACTTGATGAAGA 404
consensus_5#2      CCTCTTCTTGCNGATAAAAGTTANNGGNGTAGGGCAGGG--------------------- 165
consensus_5#0      CCTCTTCTTGCTGATAAAAGTT-CTAAAATCGCACGTGATTATGGCGTACTTGATGAAGA 415
                   *********** **********       * *  *  *                      

consensus_5#1      AAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAAT 464
consensus_5#2      ------------------------------------------------------------
consensus_5#0      AAGTGGAGTTCCATTTCGTGGTCTCTTCATCATAGATGATAAACAAAATTTACGCCAAAT 475
                                                                               

consensus_5#1      TA---------------------------------------------------------- 466
consensus_5#2      ------------------------------------------------------------
consensus_5#0      TACTATCAATGATTTACCAGTTGGGAGGTCTGTTGATGAGACTTTACGTTTAGTTCAAGC 535
                                                                               

consensus_5#1      ------------------------------------------------------------
consensus_5#2      ------------------------------------------------------------
consensus_5#0      ATTCCAATATACTGATAAACATGGAGAAGTATGTCCAGCTGGCTGGAAACCAGGAAAGAA 595
                                                                               

consensus_5#1      ------------------------------------------------------------
consensus_5#2      ------------------------------------------------------------
consensus_5#0      AACTATGAAACCTGATGTAGTTGGTTCTAAAGAATATTTTAAAGATACATAAATGAAAGA 655
                                                                               

consensus_5#1      ------------------------------------------------------------
consensus_5#2      ------------------------------------------------------------
consensus_5#0      AAAAAAAAAAAAGAAAGAAATTTCTATACTTTATTAAAACTGTCATTTATGTAAAAATAT 715
                                                                               

consensus_5#1      ------------------------------------------------------------
consensus_5#2      ------------------------------------------------------------
consensus_5#0      TACATTTTTTAAAACTAAAAACTTGTTTTGTAATAAACATGGTATATGTAATTTAAAATC 775
                                                                               

consensus_5#1      ---------------
consensus_5#2      ---------------
consensus_5#0      GTAATATTAATTATA 790
                                  




Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)