Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 568 cluster # 568       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_568#0 length = 858 sequences # 4  

consensusID : consensus_568#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 858
fasta sequence
                              [CTTTATCTGTTCTTCGTGTATAAAGAAGATTTCGTGTTTGTACAAAAAAATGAAGATGAAAGATAAAAAATAAATGATCGACGACGAACAAAATTATATATTTAACCGTTTTGCGCTTGTTTAAAACGTTGTACAAAATGATGAACGCGTACGTATAATTCCATACGTGGGAAACTGTGGAAATTGCGCCCGCTAGATTGATAATATAGCCGATCGAACTTCGTCTGTAATTGTTAATCGCGACGTTTTGTGTGTCTAGGTCGAGCAAACGAAAGTTAATACTTTATAGCGAGGAATCACTACTGCTTTTATCATTGACGTAGTCAATTTCGCTTCCTTTTCGTTTCGAGTAGAGCGGAGAACAGAGAGTAGCCGGCGACGAGCGTTACGGAAAGGAATAATTCGTTCGAAAGTGTTTGAAAATGAGGGAAGAGAGGAAGGAAGAAGAAGAAGAAGAACGGGCGAGAGACATGCACGGTTTTCTTTATCCACGTAGAAAATTGAATCGGCGAACGCCGATCTTGAATCTTTTGCAAAGAGAGAAAAAAAAGAAAGAAAAAAAAAAAAAAATGTCGCCATGTCGCTCGAATGGAATCATCATCTGTAACTCTTCTCGTGAATCAGGGAAACTAGCATATAAGGGTAGGAAGGCAGCAGTCAAGCCACTCGAGAAATACCGTGAATGCGGGGAACCGTGAAAACGCAGGTTCGGCCGTTTAACA-GGAAAGGATGTTTAACGGGAAAAAGAAAAATTTGTAAAAGAATATGAATATGCACACAGCGGAGGGAAGCAAAAAGAAAAATAAAAAAAAAAAAAATAAAATAGGAGCCGTAAGCGTAGTCACCGAGCATACCTTA]

[+] EMBL BI514927             [CTTTATCTGTTCTTCGTGTATAAAGAAGATTTCGTGTTTGTACAAAAAAATGAAGATGAAAGATAAAAAATAAATGATCGACGACGAACAAAATTATATATTTAACCGTTTTGCGCTTGTTTAAAACGTTGTACAAAATGATGAACGCGTACGTATAATTCCATACGTGGGAAACTGTGGAAATTGCGCCCGCTAGATTGATAATATAGCCGATCGAACTTCGTCTGTAATTGTTAATCGCGACGTTTTGTGTGTCTAGGTCGAGCAAACGAAAGTTAATACTTTATAGCGAGGAATCACTACTGCTTTTATCATTGACGTAGTCAATTTCGCTTCCTTTTCGTTTCGAGTAGAGCGGAGAACAGAGAGTAGCCGGCGACGAGCGTTACGGAAAGGAATAATTCGTTCGAAAGTGTTTGAAAATGAGGGAAGAGAGGAAGGAAGAAGAAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BI508839             [                                                                                                                                                                                                                                                                                                                                                       TTTCGAGTAGAGCGGAGAACAGAGAGTAGCCGGCGACGAGCGTTACGGAAAGGAATAATTCGTTCGAAAGTGTTTGAAAATGAGGGAAGAGAGGAAGGAAGAAGAAGAAGAAGAACGGGCGAGAGACATGCACGGTTTTCTTTATCCACGTAGAAAATTGAATCGGCGAACGCCGATCTTGAATCTTTTGCAAAGAGAGAAAAAAAAGAAAGAAAAAAAAAAAAAAATGTCGCCATGTCGCTCGAATGGAATCATCATCTGTAACTCTTCTCGTGAATCAGGGAAACTAGCATATAAGGGTAGGAAGGCAGCAGTCAAGCCACTCGAGAAATACCGTGAATGCGGGGAACCGTGAAAACGCAGGTTCGGCCGTTTAACA GGAAAGGATGTTTAACGGGAAAAAGAAAAATTTGTAAAAGAATATGAATATGCACACAGCGGAGGGAAGCAAAAAGAAAAATAAAAAAAAAAAAAATAAAATAGGAGCCGTAAGCGTAG                 ]
[-] EMBL BI503050             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAAAAGAAAG  AAAAAAAAAAAAATGTCGCCA  TTGCTCGAATGGAATCATCATCTGTAACTCTTCTCGTGAATCAGGGAAACTAGCATATAAGGGTAGGAAGGCAGCAGTCAAGCCACTCGAGAAATACCGTGAATGCGGGGAACCGTGAAAACGCAGGTTCGGCCGTTTAACAGGGAAAGGATGTTTAACGGGAAAAAGAAAAATTTGTAAAAGAATATGAATATGNNNCNAGCGGAGGGAAGCAAAAAGAAAAATAAAAAAAAAAAAAATAAAATAGGAGCCGTAAGCGTAGTCACCGAGCATACCTTA]
[-] EMBL BI510327             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAAAAGAAAGAAAAAAAAAAAAAAATGTCGCCATGTCGCTCGAATGGAATCATCATCTGTAACTCTTCTCGTGAATCAGGGAAACTAGCATATAAGGGTAGGAAGGCAGCAGTCAAGCCACTCGAGAAATACCGTGAATGCGGGGAACCGTGAAAACGCAGGTTCGGCCGTTTAACA GGAAAGGATGTTTAACGGGAAAAAGAAAAATTTGTAAAAGAATATGAATATGCACACAGCGGAGGGAAGCAAAAAGAAAAATAAAAAAAAAAAAAATAAAATAGGAGCCGTAAGCGTAG                 ]


>consensus_568#0 CTTTATCTGTTCTTCGTGTATAAAGAAGATTTCGTGTTTGTACAAAAAAATGAAGATGAA AGATAAAAAATAAATGATCGACGACGAACAAAATTATATATTTAACCGTTTTGCGCTTGT TTAAAACGTTGTACAAAATGATGAACGCGTACGTATAATTCCATACGTGGGAAACTGTGG AAATTGCGCCCGCTAGATTGATAATATAGCCGATCGAACTTCGTCTGTAATTGTTAATCG CGACGTTTTGTGTGTCTAGGTCGAGCAAACGAAAGTTAATACTTTATAGCGAGGAATCAC TACTGCTTTTATCATTGACGTAGTCAATTTCGCTTCCTTTTCGTTTCGAGTAGAGCGGAG AACAGAGAGTAGCCGGCGACGAGCGTTACGGAAAGGAATAATTCGTTCGAAAGTGTTTGA AAATGAGGGAAGAGAGGAAGGAAGAAGAAGAAGAAGAACGGGCGAGAGACATGCACGGTT TTCTTTATCCACGTAGAAAATTGAATCGGCGAACGCCGATCTTGAATCTTTTGCAAAGAG AGAAAAAAAAGAAAGAAAAAAAAAAAAAAATGTCGCCATGTCGCTCGAATGGAATCATCA TCTGTAACTCTTCTCGTGAATCAGGGAAACTAGCATATAAGGGTAGGAAGGCAGCAGTCA AGCCACTCGAGAAATACCGTGAATGCGGGGAACCGTGAAAACGCAGGTTCGGCCGTTTAA CAGGAAAGGATGTTTAACGGGAAAAAGAAAAATTTGTAAAAGAATATGAATATGCACACA GCGGAGGGAAGCAAAAAGAAAAATAAAAAAAAAAAAAATAAAATAGGAGCCGTAAGCGTA GTCACCGAGCATACCTTA



clustalw multiple alignements is not computed in this case


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)