These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_796#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 578 fasta sequence [TTCTTCTTTTTTTTTTCTCTTTTTTTTCTTTTTACTTTACTTTCCATCGTGGGAATTGTGCTCGAAAAGAAGTTCGAAAACTACCGTCGGATTACACTTAAAAGAGAATAGCAGATGGAAGAGCTGTTTAAATCTTAAAGGACTCTAAGGACGTGGCCGAGGATCGACGGGACAAAGCTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGATCGATACGAAAAATGATTCACGATTAATTTTATTACAAATTATCATCACGTTTCGACACGCATTTCAAATACAATATCTTTAAAAATTCTTCCAAGAGA] [+] EMBL BI505306 [TTCTTCTTTTTTTTTTCTCTTTTTTTTCTTTTTACTTTACTTTCCATCGTGGGAATTGTGCTCGAAAAGAAGTTCGAAAACTACCGTCGGATTACACTTAAAAGAGAATAGCAGATGGAAGAGCTGTTTAAATCTTAAAGGACTCTAAGGACGTGGCCGAGGATCGACGGGACAAAGCTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGATCGATACGAAAAATGATTCACGATTAATTTTATTACAAATTATCATCACGTTTCGACACGCATTTCAAATACAATATCTTTAAAAATTCTTCCAAGAGA] consensusID : consensus_796#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 541 fasta sequence [CTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGACTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACTTCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCGAGTGCCTGCCTCCCGACCACTTGCCCAGGCCCAAGATCTTCGATGAAATCTCTCAGTTGGCCGGTTTCGCCCGACATTCGTAGACTGGGGGACCAACTGTCCCCGTCGCCGCTACCCTCGCCGTC] [-] EMBL BI507297 [CTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGACTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACTTCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCGAGTGCCTGCCTCCCGACCACTTGCCCAGGCCCAAGATCTTCGATGAAATCTCTCAGTTGGCCGGTTTCGCCCGACATTCGTAGACTGGGGGACCAACTGTCCCCGTCGCCGCTACCCTCGCCGTC] consensusID : consensus_796#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence [GTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACTTCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCGAGTGCCTGCCTCCCGACCACTTGCCCAGGCCCAAGATCTTCGATGAAATCTCTCAGTTGGCCGGTTTCGCCCAACATTCGTAGACTGGGGGACCAAGAGCTTCCTTCGGAACTAGAGATCGAGTTGAGACTTCCGGCTGTGTCACTGGCCACCGATCCCGACTGTTTCCCGGATTCAAAGCGCTGATATGGTACAATCTCCTCGGAACGTTGTATGCTGCTCGGCGTGCTGTTGCGTTTCCGGCTCGATAAACCG] [-] EMBL BI505982 [GTCACCTGCAGTATACAACCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCTGTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAAGCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACTTCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCGAGTGCCTGCCTCCCGACCACTTGCCCAGGCCCAAGATCTTCGATGAAATCTCTCAGTTGGCCGGTTTCGCCCAACATTCGTAGACTGGGGGACCAAGAGCTTCCTTCGGAACTAGAGATCGAGTTGAGACTTCCGGCTGTGTCACTGGCCACCGATCCCGACTGTTTCCCGGATTCAAAGCGCTGATATGGTACAATCTCCTCGGAACGTTGTATGCTGCTCGGCGTGCTGTTGCGTTTCCGGCTCGATAAACCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_796#1 CTAAGGATGGTGGTCCACTGACCAGGGATATGTTGCCAAACAGCTTATACCACCCGAACA 60 consensus_796#2 ------------------------------------------------------------ consensus_796#0 ------------------------------------------------------------ consensus_796#1 CCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCATGAACACTTTTT 120 consensus_796#2 ------------------------------------------------------------ consensus_796#0 ------------------------------------------------------------ consensus_796#1 TCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAACCCCGGCAAT 180 consensus_796#2 --------------------------------GTCACCTGCAGTATACAACCCCGGCAAT 28 consensus_796#0 ---TTCTTCTTTTTTTTTTCTCTTTTTTTTCTTTTTACTTTACTTTCCATCGTGGGAATT 57 * ** * * * ** * ** * * consensus_796#1 TTTCTCTGAAGG----CTAACGACTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCT 236 consensus_796#2 TTTCTCTGAAGG----CTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTGGCTGCT 84 consensus_796#0 GTGCTCGAAAAGAAGTTCGAAAACTACCGTCGGATTACACTTAAAAGAGAA-TAGCAGAT 116 * *** ** * * * * * ** * ** * ** * * consensus_796#1 GTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAA 296 consensus_796#2 GTCGTTTTCGCTTTCGCGATGCATTTCTTCCCGTTCACCAAATAAACTTTCACGTAGGAA 144 consensus_796#0 GGAAGAGCTGTTTAAATCTTAAAGGACTCTAAGGACGTGGCCGAGGATCGACGGGACAAA 176 * * ** * * ** * * * * * * ** consensus_796#1 GCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACT 356 consensus_796#2 GCTGGAATGGCTTTAGTGCCCTGTTTCGGTTTAAGGTCTTTGGCACGTATGACCTCCACT 204 consensus_796#0 GCT--AAGGATGGTGGTCCACTGACCAGG-----GATATGTTGC-CAAACAGCTTATACC 228 *** ** * * ** * *** ** * * * * ** * * * * ** consensus_796#1 TCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCG 416 consensus_796#2 TCGAGGAAGCCTTTCTTCTGAGAGAGCGAGAGCTGAATCTCGCCAAGGCAGCGTGCACCG 264 consensus_796#0 ACCCGAACACCATCTCATTGAGGTTCAGTTCGTCCAACACGATCTGCGCAATGCCCAT-G 287 * * * ** * **** * * ** * *** * ** * consensus_796#1 AGTGCCTGCCTCCCGACCACTTGCCCAGG-----CCCAAGATCTTCGATGAAATCTCTCA 471 consensus_796#2 AGTGCCTGCCTCCCGACCACTTGCCCAGG-----CCCAAGATCTTCGATGAAATCTCTCA 319 consensus_796#0 AACACTTTTTTCCCTTCTAATCGGCCGTAATCACCCCATACTGTCACCTGCAGTATACAA 347 * * * **** * * * * ** **** * * ** * * * * consensus_796#1 GTTGGCCGGTTTC-------GCCCGACATTCGTAGACTGGG-GGACCAACTGTCCCCGTC 523 consensus_796#2 GTTGGCCGGTTTC-------GCCCAACATTCGTAGACTGGG-GGACCAAGAGCTTCCTTC 371 consensus_796#0 CCCCGGCAATTTTCTCTGAAGGCTAACGATTGTTGGTAGAACGGATCCAACGTTTTCCTG 407 * * *** * * ** * ** * * *** * * * * * consensus_796#1 GCCGCTACCCTCGCCGTC------------------------------------------ 541 consensus_796#2 GGAACTAGAGATCGAGTTGAGACTTCCGGCTGTGTCACTGGCCACCGATCCCGACTGTTT 431 consensus_796#0 GCTGCTGTCGTTTTCGCT-----TTCGCGATGCATTTCTTCCCGTTCA-CCAAATAAACT 461 * ** * consensus_796#1 ------------------------------------------------------------ consensus_796#2 CCCGGATTCAAAGC---GCTGATATGGTACAATCTCCTCGGAACGTTGTAT-GCTGCTCG 487 consensus_796#0 TTCACGTAGGAAGCTGGATCGATACGAAAAATGATTCACGATTAATTTTATTACAAATTA 521 consensus_796#1 --------------------------------------------------------- consensus_796#2 GCGTGCTGTTGCGTTTCCGGCTCGATAAACCG------------------------- 519 consensus_796#0 TCATCACGTTTCGACACGCATTTCAAATACAATATCTTTAAAAATTCTTCCAAGAGA 578 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |