These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_817#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 595 fasta sequence [GTCAATGTGATCGATTAATAGTGCATTCTTGTGATATTTTGCGAACATTTACGTGAAACGGGATTCAACTCGGCGTTTTCAATTGGCTTCTATTCCTCCAAATCAGCTACGTTTACTGCGCAACAGGAAAGGGAACAAAGGGTCCGCAGTTCGTTAGGTGGACACAACTTTCTTCTAATTATCAAAGAGCGGCCGAGAAGAAACATGGAGGTGGGCGGGGTCGGTATCGCGACAGATGCAATTACAGTTAGTTACGGGAACTAATCCACTGCGACTGCTTGTACTTCATCATCGGGGCTTTGCAATGTAATTTAAGTTTGATTGTCAAACCTGGCCGTTCATCTCTTTCTCTGGGGGAGGGGGAGGGAGAGAAAAAAAAAAAACGTGGTGGCGGATTTGATTGTGGAAAATTGGTGCGAAATACGATTTTACTGCTACTATGGAAATAATTACACGGCCATTTCGTCGAATTATTTTTTTTTCCCCCTCTCTTTGATTGAGAAATTTGACATTCGATAAATATATATACATATTACTTAAAATAACAATTAAAACGATCATAATCTAAAATATTTAACGAGACAAGCGAATTATG] [+] EMBL BI509106 [GTCAATGTGATCGATTAATAGTGCATTCTTGTGATATTTTGCGAACATTTACGTGAAACGGGATTCAACTCGGCGTTTTCAATTGGCTTCTATTCCTCCAAATCAGCTACGTTTACTGCGCAACAGGAAAGGGAACAAAGGGTCCGCAGTTCGTTAGGTGGACACAACTTTCTTCTAATTATCAAAGAGCGGCCGAGAAGAAACATGGAGGTGGGCGGGGTCGGTATCGCGACAGATGCAATTACAGTTAGTTACGGGAACTAATCCACTGCGACTGCTTGTACTTCATCATCGGGGCTTTGCAATGTAATTTAAGTTTGATTGTCAAACCTGGCCGTTCATCTCTTTCTCTGGGGGAGGGGGAGGGAGAGAAAAAAAAAAAACGTGGTGGCGGATTTGATTGTGGAAAATTGGTGCGAAATACGATTTTACTGCTACTATGGAAATAATTACACGGCCATTTCGTCGAATTATTTTTTTTTCCCCCTCTCTTTGATTGAGAAATTTGACATTCGATAAATATATATACATATTACTTAAAATAACAATTAAAACGATCATAATCTAAAATATTTAACGAGACAAGCGAATTATG] [+] EMBL BI503776 [GTCAATGTGATCGATTAATAGTGCATTCTTGTGATATTTTGCGAACATTTACGTGAAACGGGATTCAACTCGGCGTTTTCAATTGGCTTCTATTCCTCCAAATCAGCTACGTTTACTGCGCAACAGGAAAGGGAACAAAGGGTCCGCAGTTCGTTAGGTGGACACAACTTTCTTCTAATTATCAAAGAGCGGCCGAGAAGAAACATGGAGGTGGGCGGGGTCGGTATCGCGACAGATGCAATTACAGTTAGTTACGGGAACTAATCCACTGCGACTGCTTGTACTTCATCATCGGGGCTTTGCAATGTAATTTAAGTTTGATTGTCAAACCTGGCCGTT ] consensusID : consensus_817#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence [CATCTTTCGTGTTTATTTCGTTTTAAAATGTATCCTGATGTTCATTTTCGTCAATGTGATCGATTAATAGTGCATTCTTGTGATATTTTGCGAACATTTACGTGAAACGGGATTCAACTCGGCGTTTTCAATTGGCTTCTATTCCTCCAAATCAGCTACGTTTACTGCGCAACAGGAAAGGGAACAAAGGGTCCGCAGTTCGTTAGGTGGACACAACTTTCTTCTAATTATCAAAGAGCGGCCGAGAAGAAACATGGAGGTGGGCGGGGTCGGTATCGCGACAGATGCAATTACAGTTAGTTACGGGAACTAATCCACTGCGACTGCTTGTACTTCATCATCGGGGCTTTGCAATTATGCAGTACACGTAGTATACACGAGTGTGCACGATGGAGGACAAAAGTGTCATAAAATGTAACGAGGAATATTGAAAAAAAATACGTAATTTAGAAGAATACATTGGAAGGCGTAATGAGAATTATATTTATAAAAGGTTATTTATTAT] [+] EMBL BI507349 [CATCTTTCGTGTTTATTTCGTTTTAAAATGTATCCTGATGTTCATTTTCGTCAATGTGATCGATTAATAGTGCATTCTTGTGATATTTTGCGAACATTTACGTGAAACGGGATTCAACTCGGCGTTTTCAATTGGCTTCTATTCCTCCAAATCAGCTACGTTTACTGCGCAACAGGAAAGGGAACAAAGGGTCCGCAGTTCGTTAGGTGGACACAACTTTCTTCTAATTATCAAAGAGCGGCCGAGAAGAAACATGGAGGTGGGCGGGGTCGGTATCGCGACAGATGCAATTACAGTTAGTTACGGGAACTAATCCACTGCGACTGCTTGTACTTCATCATCGGGGCTTTGCAATTATGCAGTACACGTAGTATACACGAGTGTGCACGATGGAGGACAAAAGTGTCATAAAATGTAACGAGGAATATTGAAAAAAAATACGTAATTTAGAAGAATACATTGGAAGGCGTAATGAGAATTATATTTATAAAAGGTTATTTATTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_817#0 -------------------------------------------------GTCAATGTGAT 11 consensus_817#1 CATCTTTCGTGTTTATTTCGTTTTAAAATGTATCCTGATGTTCATTTTCGTCAATGTGAT 60 *********** consensus_817#0 CGATTAATAGTGCATTCTTGTGATATTTTGCGAACATTTACGTGAAACGGGATTCAACTC 71 consensus_817#1 CGATTAATAGTGCATTCTTGTGATATTTTGCGAACATTTACGTGAAACGGGATTCAACTC 120 ************************************************************ consensus_817#0 GGCGTTTTCAATTGGCTTCTATTCCTCCAAATCAGCTACGTTTACTGCGCAACAGGAAAG 131 consensus_817#1 GGCGTTTTCAATTGGCTTCTATTCCTCCAAATCAGCTACGTTTACTGCGCAACAGGAAAG 180 ************************************************************ consensus_817#0 GGAACAAAGGGTCCGCAGTTCGTTAGGTGGACACAACTTTCTTCTAATTATCAAAGAGCG 191 consensus_817#1 GGAACAAAGGGTCCGCAGTTCGTTAGGTGGACACAACTTTCTTCTAATTATCAAAGAGCG 240 ************************************************************ consensus_817#0 GCCGAGAAGAAACATGGAGGTGGGCGGGGTCGGTATCGCGACAGATGCAATTACAGTTAG 251 consensus_817#1 GCCGAGAAGAAACATGGAGGTGGGCGGGGTCGGTATCGCGACAGATGCAATTACAGTTAG 300 ************************************************************ consensus_817#0 TTACGGGAACTAATCCACTGCGACTGCTTGTACTTCATCATCGGGGCTTTGCAATGTAAT 311 consensus_817#1 TTACGGGAACTAATCCACTGCGACTGCTTGTACTTCATCATCGGGGCTTTGCAAT-TA-- 357 ******************************************************* ** consensus_817#0 TTAAGTTTGATTGTCAAACCTGGCCGTTCATCTCTTTCTCTGGGGGAGGGGGAGGGAGAG 371 consensus_817#1 TGCAGTACACGTAGTATACACGAGTGTGCAC----------------GATGGAGGACAAA 401 * *** * * ** * ** ** * ***** * consensus_817#0 AAAAAAAAAAAACGTGGTGGCGGATTTGATTGTGGAAAATTGGTGCGAAATACGATTTTA 431 consensus_817#1 AGTGTCATAAAATGTAACGAGGAATAT--TGAAAAAAAATACGTAATTTAGAAGAATACA 459 * * **** ** * * ** * * ***** ** * * ** * * consensus_817#0 CTGCTAC-TATGGAAATAATTACACGGCCATTTCGTCGAATTATTTTTTTTTCCCCCTCT 490 consensus_817#1 TTGGAAGGCGTAATGAGAATTATAT-----TTATAAAAGGTTATTTATTAT--------- 505 ** * * * ***** * ** ****** ** * consensus_817#0 CTTTGATTGAGAAATTTGACATTCGATAAATATATATACATATTACTTAAAATAACAATT 550 consensus_817#1 ------------------------------------------------------------ consensus_817#0 AAAACGATCATAATCTAAAATATTTAACGAGACAAGCGAATTATG 595 consensus_817#1 --------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |